iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d037846	Zm00001d037846_T007	Zm00001d037846_T007
Zm00001d037846	Zm00001d037846_T002	Zm00001d037846_T002
Zm00001d037846	Zm00001d037846_T003	Zm00001d037846_T003
Zm00001d037846	Zm00001d037846_T008	Zm00001d037846_T008

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-08	36.2	391	429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e +   p++l+C+H+f++dC+  w        +e +CPlCr
   Q: 391  CAICQEKMHV-PVLLRCKHIFCEDCVSEW------FERERTCPLCR 429
           ********77.999***************......9*********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDPPPVSPDR WGPSQGAGVG PSGLRRYGLN FSASSLLQAP IAALLEYSGV VQSGPALAAH 60
HPSAGPSSPL SASEVDGLLS AAAAGDGEVS IRIQGGPGDT EATGGPDAGT SSEDLIEATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGGAGGG TGAATGGTGA TACGGTGAAG GCAGACGCCG AACCAAACCA AAAGGCGAAG 60
GCGAAGAAGA CCAACCAAAG CAAAGCCAAC GGGATCTCCC TCTCATTCCA GAGGACTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

zma:100283780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014546	Brachypodium distachyon	84.82	6.00e-170	589.00
IUUC-Dse-031550	Dothistroma septosporum	52.08	1.00e-09	56.20
IUUC-Eeu-034649	Erinaceus europaeus	48.89	5.00e-10	58.20
IUUC-Gma-043596	Glycine max	68.54	1.00e-148	518.00
IUUC-Lpe-051314	Leersia perrieri	78.59	1.00e-164	572.00
IUUC-Mtr-058255	Medicago truncatula	67.33	2.00e-147	514.00
IUUC-Oba-075293	Oryza barthii	95.71	2.00e-124	437.00
IUUC-Obr-076737	Oryza brachyantha	96.02	2.00e-135	474.00
IUUC-Ogl-077068	Oryza glaberrima	96.27	2.00e-161	561.00
IUUC-Ogu-078321	Oryza glumaepatula	96.27	1.00e-161	561.00
IUUC-Oin-079122	Oryza indica	83.30	5.00e-162	563.00
IUUC-Ome-081614	Oryza meridionalis	96.27	4.00e-162	563.00
IUUC-Oni-082296	Oryza nivara	83.30	5.00e-162	563.00
IUUC-Opu-083546	Oryza punctata	85.85	1.00e-162	565.00
IUUC-Oru-084510	Oryza rufipogon	96.27	2.00e-161	561.00
IUUC-Osa-085495	Oryza sativa	96.27	2.00e-161	561.00
IUUC-Ppa-095990	Physcomitrella patens	73.81	4.00e-123	434.00
IUUC-Ppe-101186	Prunus persica	65.19	7.00e-143	499.00
IUUC-Sit-110475	Setaria italica	92.33	2.00e-176	610.00
IUUC-Stu-112302	Solanum tuberosum	62.39	6.00e-140	490.00
IUUC-Sar-113494	Sorex araneus	46.15	4.00e-18	85.50
IUUC-Sbi-114889	Sorghum bicolor	96.24	0.00e+00	743.00
IUUC-Tae-123491	Triticum aestivum	84.31	1.00e-171	595.00
IUUC-Tbe-128158	Tupaia belangeri	48.89	1.00e-09	57.40
IUUC-Vvi-131323	Vitis vinifera	65.05	2.00e-148	518.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence