iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094396

UUCD1 version

UUC-PeM-00264

Ensembl Protein ID

ENSPMAP00000003153.1

UniProt Accession

S4RD71; S4RD71_PETMA

Protein Name

Uncharacterized protein

Gene Name

WDR1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000002868.1	ENSPMAT00000003168.1	ENSPMAP00000003153.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-38	128.3	233	267
UBD/Beta-Prp	5.10e-57	192.5	55	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H ++++++++ +d t l s+s+D t+++WD+  g+
   Q: 233  HDGGIYAVCWsPDsTQLMSASGDRTVRLWDVAAGR 267
           99*********999****************98887 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlk 91
           ++h ++ ++ k++p++ ++a+g ++g++++wd+t++  l ++  +   + ++++ + +d+k ++ ++e   ++  v+  ++g+ v  + 
   Q: 55   TEHAHFTSVAKYAPSGFYIASGDTSGKVRIWDTTQKEHLLKYeyQPFAGRIKDIAWTEDSKRIAVVGEGreNFGAVFLWDSGSSVGEIV 143
           56778889999************************988777632333456***********9999999988566666667899****** PP
   S: 92   ghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tg 177
           gh++ + s+++ +++ ++lv+Gs+d+ +   + +  +    t s h+++vn+v+++p+gn ++++++D+++ ++d ++g+ +  l  ++
   Q: 144  GHSKVINSVDIKQTRpYRLVTGSDDNNAAFLQGPPFKFQF-TTSDHSRFVNSVRFSPNGNFFATAGADGQIFIYDGASGQKVSSLggEK 231
           *************999*************99888888888.**********************************************88 PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec............................................vrtlnght 222
           +h++ +y + +++++++l+s+s d+tv+lwd+ +g+                                             +r  +gh+
   Q: 232  AHDGGIYAVCWSPDSTQLMSASGDRTVRLWDVAAGRAtttftmgaevndqqlgclwqgqhllsiglsgyihyldrnnpskpIRVIKGHS 320
           8********************************88886666777777777777777777777777777777777777777788888888 PP
   S: 223  dnvksvrfs..pnderlvsgssDgsiri.......Wd 250
           + ++s+ ++  + +  ++sgs Dg i+i       Wd
   Q: 321  KSIQSLTTHtgSGSPTIYSGSYDGHINIllgsthyWD 357
           8888888777777778888888888877555555555 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

MPYELNSVFA CLPQVERGVP KVLGGDPKGV NFLYTNGRSV IIRNIENPAI ADVYTEHAHF 60
TSVAKYAPSG FYIASGDTSG KVRIWDTTQK EHLLKYEYQP FAGRIKDIAW TEDSKRIAVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGTGGTCT TCCTCCTCTT ACGTTTCCTC CTCCTTTCGT TAAGTTTTCC TCACGGCAGC 60
TCAAGGGGGA AACGGCTCCT TCGCAACGCC GCGAGCACCA TGCCCTACGA GCTGAGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006465	Arabidopsis lyrata	35.96	7.00e-108	382.00
IUUC-Ath-006740	Arabidopsis thaliana	35.31	3.00e-106	377.00
IUUC-Acl-008262	Aspergillus clavatus	36.45	9.00e-109	385.00
IUUC-Afu-008989	Aspergillus fumigatus	37.17	7.00e-99	353.00
IUUC-Ani-009167	Aspergillus nidulans	37.08	6.00e-115	406.00
IUUC-Ang-009595	Aspergillus niger	38.41	4.00e-104	370.00
IUUC-Aor-009908	Aspergillus oryzae	36.89	2.00e-105	375.00
IUUC-Ate-010580	Aspergillus terreus	38.70	7.00e-115	407.00
IUUC-Ame-011269	Astyanax mexicanus	56.62	2.00e-120	424.00
IUUC-Bgr-011996	Blumeria graminis	34.51	4.00e-107	380.00
IUUC-Bta-013278	Bos taurus	70.73	0.00e+00	911.00
IUUC-Bci-013925	Botrytis cinerea	36.61	6.00e-111	393.00
IUUC-Bdi-014659	Brachypodium distachyon	35.16	5.00e-100	357.00
IUUC-Bra-017139	Brassica rapa	35.27	6.00e-107	379.00
IUUC-Cel-018241	Caenorhabditis elegans	39.10	4.00e-121	427.00
IUUC-Csa-023028	Chlorocebus sabaeus	70.24	0.00e+00	872.00
IUUC-Csv-025986	Ciona savignyi	35.81	8.00e-94	335.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	38.30	6.00e-112	396.00
IUUC-Cne-026814	Cryptococcus neoformans	34.08	3.00e-102	364.00
IUUC-Dre-027498	Danio rerio	84.41	1.00e-92	330.00
IUUC-Dse-031526	Dothistroma septosporum	36.77	2.00e-112	398.00
IUUC-Eeu-034531	Erinaceus europaeus	57.62	4.00e-107	380.00
IUUC-Fox-037924	Fusarium oxysporum	33.71	2.00e-101	361.00
IUUC-Gmo-039238	Gadus morhua	64.77	0.00e+00	801.00
IUUC-Ggr-039830	Gaeumannomyces graminis	35.99	3.00e-97	347.00
IUUC-Gac-042363	Gasterosteus aculeatus	66.07	0.00e+00	836.00
IUUC-Gma-043218	Glycine max	36.10	9.00e-111	392.00
IUUC-Ggo-044632	Gorilla gorilla	69.11	0.00e+00	856.00
IUUC-Hsa-045792	Homo sapiens	70.08	0.00e+00	887.00
IUUC-Lch-050428	Latimeria chalumnae	68.83	0.00e+00	896.00
IUUC-Lpe-051306	Leersia perrieri	35.79	2.00e-107	381.00
IUUC-Loc-052096	Lepisosteus oculatus	62.50	0.00e+00	774.00
IUUC-Laf-054060	Loxodonta africana	69.11	0.00e+00	868.00
IUUC-Meu-056689	Macropus eugenii	60.59	1.00e-143	501.00
IUUC-Mor-056940	Magnaporthe oryzae	36.20	2.00e-96	345.00
IUUC-Mtr-057922	Medicago truncatula	36.60	3.00e-110	390.00
IUUC-Mla-059103	Melampsora laricipopulina	33.45	5.00e-78	283.00
IUUC-Mvi-060448	Microbotryum violaceum	32.51	8.00e-81	293.00
IUUC-Mmr-061226	Microcebus murinus	69.59	0.00e+00	870.00
IUUC-Mmu-064170	Mus musculus	71.06	0.00e+00	894.00
IUUC-Mac-065124	Musa acuminata	35.50	9.00e-110	389.00
IUUC-Mlu-067253	Myotis lucifugus	71.03	0.00e+00	889.00
IUUC-Nfi-068550	Neosartorya fischeri	37.60	7.00e-114	402.00
IUUC-Ncr-068948	Neurospora crassa	36.02	1.00e-113	401.00
IUUC-Opr-070254	Ochotona princeps	69.24	0.00e+00	833.00
IUUC-Ont-071666	Oreochromis niloticus	67.97	0.00e+00	852.00
IUUC-Oba-075010	Oryza barthii	35.27	6.00e-106	376.00
IUUC-Obr-076364	Oryza brachyantha	35.43	2.00e-106	378.00
IUUC-Ogl-077019	Oryza glaberrima	35.27	6.00e-106	376.00
IUUC-Ogu-078496	Oryza glumaepatula	35.27	6.00e-106	376.00
IUUC-Oin-080116	Oryza indica	35.43	2.00e-106	377.00
IUUC-Olo-080290	Oryza longistaminata	35.37	1.00e-105	375.00
IUUC-Ome-081969	Oryza meridionalis	35.27	7.00e-106	376.00
IUUC-Oni-082075	Oryza nivara	35.10	8.00e-106	376.00
IUUC-Opu-083959	Oryza punctata	35.27	2.00e-106	377.00
IUUC-Oru-084711	Oryza rufipogon	35.27	6.00e-106	376.00
IUUC-Osa-085958	Oryza sativa	35.43	2.00e-106	377.00
IUUC-Ola-086968	Oryzias latipes	67.97	0.00e+00	858.00
IUUC-Oga-089108	Otolemur garnettii	71.06	0.00e+00	915.00
IUUC-Pan-092585	Papio anubis	70.41	0.00e+00	874.00
IUUC-Ppa-095876	Physcomitrella patens	33.98	1.00e-106	378.00
IUUC-Pfo-096973	Poecilia formosa	67.64	0.00e+00	887.00
IUUC-Pab-098391	Pongo abelii	70.08	0.00e+00	872.00
IUUC-Pgr-103593	Puccinia graminis	33.39	9.00e-82	296.00
IUUC-Rno-105737	Rattus norvegicus	70.89	0.00e+00	912.00
IUUC-Sce-106383	Saccharomyces cerevisiae	27.98	5.00e-68	250.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	35.28	1.00e-111	395.00
IUUC-Spo-108309	Schizosaccharomyces pombe	32.52	4.00e-93	333.00
IUUC-Sit-109962	Setaria italica	37.04	1.00e-109	389.00
IUUC-Sar-113415	Sorex araneus	61.62	2.00e-94	338.00
IUUC-Sbi-114857	Sorghum bicolor	36.23	3.00e-107	380.00
IUUC-Sre-114900	Sporisorium reilianum	34.19	2.00e-95	341.00
IUUC-Tru-117871	Takifugu rubripes	64.98	0.00e+00	830.00
IUUC-Tsy-119172	Tarsius syrichta	79.08	4.00e-116	410.00
IUUC-Tni-120339	Tetraodon nigroviridis	64.72	0.00e+00	852.00
IUUC-Tca-121609	Theobroma cacao	35.50	8.00e-107	379.00
IUUC-Tbe-127526	Tupaia belangeri	68.24	0.00e+00	871.00
IUUC-Ttr-128898	Tursiops truncatus	64.29	0.00e+00	822.00
IUUC-Uma-129631	Ustilago maydis	32.26	2.00e-96	344.00
IUUC-Vda-129732	Verticillium dahliae	35.92	2.00e-91	328.00
IUUC-Xtr-132860	Xenopus tropicalis	65.48	0.00e+00	840.00
IUUC-Xma-133830	Xiphophorus maculatus	68.13	0.00e+00	892.00
IUUC-Yli-134335	Yarrowia lipolytica	30.89	4.00e-71	260.00
IUUC-Zma-135907	Zea mays	36.39	2.00e-107	381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence