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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018178
UUCD1 version UUC-CaE-00058
Ensembl Protein ID F10B5.6
UniProt Accession G5EG38; CDC16_CAEEL
Genbank Protein ID AAG41979.1; CAA88313.1
Protein Name Cell division cycle protein 16 homolog; Abnormal embryogenesis protein 27; Anaphase-promoting complex subunit 6
Genbank Nucleotide ID AF314467; Z48334
Gene Name emb-27; apc-6; pod-6; F10B5.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00001281 F10B5.6 F10B5.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDiRefIndexMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C 22.37 6.00e-18 87.40 IUUC-Sce-106205
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Probable component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle (By similarity). The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins (By similarity). Developmental role in early embryogenesis and the metaphase to anaphase transition in oocyte and spermatocyte meiosis and mitosis in germ cells (PubMed:11134076). Required for embryonic anterior-posterior axis formation (PubMed:11832245). Plays a role in regulating the abundance of glr-1 receptors in postmitotic neurons, which may in turn control animal locomotion (PubMed:15556870). Involved in regulating GABA neurotransmitter release at neuromuscular junctions in GABA motor neurons (PubMed:24321454).
 Probable component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle (By similarity). The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins (By similarity). Developmental role in early embryogenesis and the metaphase to anaphase transition in oocyte and spermatocyte meiosis and mitosis in germ cells (PubMed:11134076). Required for embryonic anterior-posterior axis formation (PubMed:11832245). Plays a role in regulating the abundance of glr-1 receptors in postmitotic neurons, which may in turn control animal locomotion (PubMed:15556870). Involved in regulating GABA neurotransmitter release at neuromuscular junctions in GABA motor neurons (PubMed:24321454).
Protein Sequence
(Fasta)
MSAISPDTKS FAIPTLADEG SSSKPASSLD LPKHESIRFK PIKTLASRID GSEYYDEASM 60
EKVMEMLEIG RTDEAVAYAD TLYSNIIDDE QQDIVTIAEY VKILVVLRQW RRISHIIARG 120
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Protein Fasta Sequence


>IUUC-Cel-018178|E3,APC_C|Caenorhabditis elegans
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Nucleotide Sequence
(Fasta)
CATGAGCGCG ATCTCGCCTG ATACAAAAAG TTTTGCGATT CCGACATTGG CTGATGAAGG 60
TTCCTCAAGC AAGCCAGCAT CATCTTTGTG AGTTTAATAA ATAACATTTC TTTTTCAAAC 120
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Nucleotide Fasta Sequence


>IUUC-Cel-018178|E3,APC_C|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0965--Cell junction
KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0469--Meiosis
KW-0498--Mitosis
KW-0532--Neurotransmitter transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0770--Synapse
KW-0802--TPR repeat
KW-0813--Transport
KW-0833--Ubl conjugation pathway
Interpro

IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
PROSITE

PS50005--TPR
PS50293--TPR_REGION
SMART

SM00028--TPR
Gene Ontology

GO:0030054--C:cell junction
GO:0045202--C:synapse
GO:0051301--P:cell division
GO:0030703--P:eggshell formation
GO:0051321--P:meiotic cell cycle
GO:0007067--P:mitotic nuclear division
GO:0007275--P:multicellular organism development
GO:0006836--P:neurotransmitter transport
GO:0016567--P:protein ubiquitination
KEGG cel:CELE_F10B5.6
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000117 Aegilops tauschii 22.89 2.00e-17 82.00
IUUC-Aml-001382 Ailuropoda melanoleuca 29.49 1.00e-43 170.00
IUUC-Atr-002720 Amborella trichopoda 29.05 3.00e-37 148.00
IUUC-Apl-003937 Anas platyrhynchos 28.71 8.00e-43 167.00
IUUC-Aca-004235 Anolis carolinensis 28.71 1.00e-42 166.00
IUUC-Aly-005937 Arabidopsis lyrata 27.24 6.00e-33 134.00
IUUC-Ath-006890 Arabidopsis thaliana 27.30 2.00e-31 129.00
IUUC-Ago-007821 Ashbya gossypii 25.10 4.00e-23 102.00
IUUC-Acl-008251 Aspergillus clavatus 24.48 3.00e-20 92.40
IUUC-Afl-008584 Aspergillus flavus 23.46 5.00e-18 85.10
IUUC-Afu-009095 Aspergillus fumigatus 25.46 2.00e-20 92.80
IUUC-Ani-009178 Aspergillus nidulans 24.54 5.00e-19 88.60
IUUC-Ang-009647 Aspergillus niger 26.27 3.00e-22 99.40
IUUC-Aor-010061 Aspergillus oryzae 23.46 5.00e-18 85.10
IUUC-Ate-010558 Aspergillus terreus 23.81 4.00e-18 85.50
IUUC-Ame-011880 Astyanax mexicanus 28.66 8.00e-42 163.00
IUUC-Bgr-012022 Blumeria graminis 25.28 2.00e-26 112.00
IUUC-Bta-012343 Bos taurus 29.03 3.00e-43 168.00
IUUC-Bci-013719 Botrytis cinerea 25.41 2.00e-26 112.00
IUUC-Bdi-014012 Brachypodium distachyon 27.87 4.00e-35 141.00
IUUC-Bol-015750 Brassica oleracea 28.32 5.00e-33 134.00
IUUC-Bra-017378 Brassica rapa 28.32 8.00e-33 133.00
IUUC-Cja-019645 Callithrix jacchus 28.71 2.00e-42 165.00
IUUC-Cfa-021173 Canis familiaris 29.35 2.00e-43 169.00
IUUC-Cpo-022175 Cavia porcellus 29.03 2.00e-43 169.00
IUUC-Csa-023470 Chlorocebus sabaeus 28.71 2.00e-42 166.00
IUUC-Cho-024406 Choloepus hoffmanni 26.92 1.00e-29 122.00
IUUC-Cin-025267 Ciona intestinalis 31.82 3.00e-42 164.00
IUUC-Cgl-026539 Colletotrichum gloeosporioides 28.01 1.00e-30 126.00
IUUC-Cne-026856 Cryptococcus neoformans 27.53 7.00e-33 134.00
IUUC-Cme-027272 Cyanidioschyzon merolae 30.28 3.00e-13 69.30
IUUC-Dre-027977 Danio rerio 28.34 3.00e-40 158.00
IUUC-Dno-029872 Dasypus novemcinctus 28.71 1.00e-42 166.00
IUUC-Dor-030233 Dipodomys ordii 28.71 3.00e-36 144.00
IUUC-Dse-031306 Dothistroma septosporum 25.96 1.00e-28 119.00
IUUC-Dme-031877 Drosophila melanogaster 27.94 5.00e-37 148.00
IUUC-Ete-032688 Echinops telfairi 24.86 1.00e-16 80.10
IUUC-Eca-033845 Equus caballus 29.03 2.00e-43 169.00
IUUC-Fca-036291 Felis catus 29.35 2.00e-43 169.00
IUUC-Fal-036779 Ficedula albicollis 28.71 9.00e-43 167.00
IUUC-Fox-037869 Fusarium oxysporum 25.74 6.00e-27 114.00
IUUC-Fso-038267 Fusarium solani 25.41 2.00e-28 119.00
IUUC-Gmo-039534 Gadus morhua 29.03 6.00e-42 164.00
IUUC-Ggr-039826 Gaeumannomyces graminis 27.92 3.00e-27 115.00
IUUC-Gga-040228 Gallus gallus 28.71 5.00e-42 164.00
IUUC-Gac-041593 Gasterosteus aculeatus 28.71 1.00e-42 166.00
IUUC-Gma-043291 Glycine max 27.60 2.00e-34 139.00
IUUC-Ggo-044491 Gorilla gorilla 28.71 2.00e-42 166.00
IUUC-Hsa-046186 Homo sapiens 28.71 2.00e-42 166.00
IUUC-Itr-048812 Ictidomys tridecemlineatus 29.03 2.00e-43 169.00
IUUC-Kpa-049186 Komagataella pastoris 28.24 8.00e-24 103.00
IUUC-Lch-050215 Latimeria chalumnae 28.87 2.00e-41 162.00
IUUC-Lpe-051395 Leersia perrieri 25.17 6.00e-25 108.00
IUUC-Loc-052340 Lepisosteus oculatus 30.49 3.00e-42 165.00
IUUC-Lma-053003 Leptosphaeria maculans 25.88 3.00e-29 122.00
IUUC-Laf-054125 Loxodonta africana 28.53 4.00e-41 161.00
IUUC-Mcc-054598 Macaca mulatta 28.71 2.00e-42 166.00
IUUC-Meu-056839 Macropus eugenii 26.03 6.00e-21 94.40
IUUC-Mor-056916 Magnaporthe oryzae 27.39 4.00e-32 131.00
IUUC-Mtr-057912 Medicago truncatula 26.95 8.00e-31 127.00
IUUC-Mla-058971 Melampsora laricipopulina 28.69 8.00e-33 134.00
IUUC-Mga-059655 Meleagris gallopavo 28.71 4.00e-42 164.00
IUUC-Mvi-060246 Microbotryum violaceum 25.00 3.00e-28 119.00
IUUC-Mmr-060691 Microcebus murinus 29.07 8.00e-44 170.00
IUUC-Mdo-061872 Monodelphis domestica 28.71 1.00e-42 166.00
IUUC-Mmu-063256 Mus musculus 29.03 2.00e-43 169.00
IUUC-Mac-064797 Musa acuminata 27.03 4.00e-33 134.00
IUUC-Mpu-066773 Mustela putorius furo 29.35 2.00e-43 169.00
IUUC-Mlu-067237 Myotis lucifugus 29.03 3.00e-43 168.00
IUUC-Nfi-068499 Neosartorya fischeri 24.05 5.00e-19 88.20
IUUC-Ncr-068893 Neurospora crassa 27.19 8.00e-32 130.00
IUUC-Nle-070117 Nomascus leucogenys 28.71 2.00e-41 162.00
IUUC-Opr-070994 Ochotona princeps 30.50 2.00e-39 155.00
IUUC-Ont-072034 Oreochromis niloticus 28.71 1.00e-42 166.00
IUUC-Oan-072989 Ornithorhynchus anatinus 28.63 1.00e-32 132.00
IUUC-Ocu-074107 Oryctolagus cuniculus 28.23 3.00e-38 151.00
IUUC-Oba-074985 Oryza barthii 28.15 6.00e-35 140.00
IUUC-Obr-076412 Oryza brachyantha 27.87 6.00e-35 140.00
IUUC-Ogl-077693 Oryza glaberrima 28.15 4.00e-35 141.00
IUUC-Ogu-078411 Oryza glumaepatula 28.15 7.00e-35 140.00
IUUC-Oin-079841 Oryza indica 28.57 2.00e-32 133.00
IUUC-Olo-080560 Oryza longistaminata 28.10 7.00e-29 120.00
IUUC-Ome-081660 Oryza meridionalis 28.15 2.00e-34 139.00
IUUC-Oni-082141 Oryza nivara 28.15 8.00e-35 140.00
IUUC-Opu-083634 Oryza punctata 27.81 2.00e-34 140.00
IUUC-Oru-084291 Oryza rufipogon 28.15 8.00e-35 140.00
IUUC-Osa-085547 Oryza sativa 28.15 4.00e-35 141.00
IUUC-Ola-086854 Oryzias latipes 27.74 1.00e-41 163.00
IUUC-Olu-087784 Ostreococcus lucimarinus 25.00 2.00e-23 102.00
IUUC-Oga-088800 Otolemur garnettii 28.71 2.00e-42 166.00
IUUC-Oar-089669 Ovis aries 29.03 3.00e-43 168.00
IUUC-Ptr-091251 Pan troglodytes 28.71 2.00e-42 166.00
IUUC-Pan-092320 Papio anubis 28.06 2.00e-39 155.00
IUUC-Psi-093847 Pelodiscus sinensis 28.71 9.00e-43 167.00
IUUC-Pno-094804 Phaeosphaeria nodorum 25.40 4.00e-27 114.00
IUUC-Ppa-095889 Physcomitrella patens 25.90 2.00e-28 119.00
IUUC-Pfo-096273 Poecilia formosa 28.39 3.00e-42 165.00
IUUC-Pab-098108 Pongo abelii 24.24 1.00e-41 162.00
IUUC-Pop-099818 Populus trichocarpa 28.11 5.00e-36 144.00
IUUC-Pca-100859 Procavia capensis 28.57 7.00e-23 100.00
IUUC-Pva-102413 Pteropus vampyrus 29.03 2.00e-43 169.00
IUUC-Pgr-103689 Puccinia graminis 29.41 3.00e-27 115.00
IUUC-Ptt-103799 Puccinia triticina 29.44 1.00e-18 87.00
IUUC-Pte-104162 Pyrenophora teres 25.41 6.00e-27 114.00
IUUC-Pyt-104476 Pyrenophora triticirepentis 25.68 2.00e-28 119.00
IUUC-Rno-105403 Rattus norvegicus 29.03 2.00e-43 169.00
IUUC-Sce-106205 Saccharomyces cerevisiae 22.37 1.00e-20 94.00
IUUC-Sha-107183 Sarcophilus harrisii 28.71 1.00e-42 166.00
IUUC-Sja-107827 Schizosaccharomyces japonicus 23.05 2.00e-26 112.00
IUUC-Spo-108188 Schizosaccharomyces pombe 23.57 4.00e-19 88.60
IUUC-Ssl-108522 Sclerotinia sclerotiorum 25.29 9.00e-24 102.00
IUUC-Smo-109302 Selaginella moellendorffii 28.29 8.00e-33 133.00
IUUC-Sit-110486 Setaria italica 27.87 1.00e-35 144.00
IUUC-Sly-111083 Solanum lycopersicum 28.72 4.00e-36 144.00
IUUC-Sar-113712 Sorex araneus 26.77 3.00e-38 152.00
IUUC-Sbi-114145 Sorghum bicolor 27.36 7.00e-34 137.00
IUUC-Sre-115016 Sporisorium reilianum 27.61 3.00e-25 109.00
IUUC-Ssc-115757 Sus scrofa 29.03 3.00e-43 168.00
IUUC-Tgu-116718 Taeniopygia guttata 28.71 1.00e-42 166.00
IUUC-Tru-118018 Takifugu rubripes 27.10 1.00e-40 159.00
IUUC-Tsy-118804 Tarsius syrichta 29.03 2.00e-43 169.00
IUUC-Tni-119767 Tetraodon nigroviridis 28.06 3.00e-40 158.00
IUUC-Tca-121364 Theobroma cacao 30.77 1.00e-36 146.00
IUUC-Tre-122067 Trichoderma reesei 25.73 1.00e-27 116.00
IUUC-Tvi-122461 Trichoderma virens 25.73 5.00e-27 114.00
IUUC-Tae-123368 Triticum aestivum 26.89 4.00e-33 134.00
IUUC-Tur-126602 Triticum urartu 27.90 7.00e-25 107.00
IUUC-Tme-126892 Tuber melanosporum 25.83 1.00e-25 110.00
IUUC-Tbe-127430 Tupaia belangeri 33.33 1.00e-10 60.50
IUUC-Ttr-128535 Tursiops truncatus 29.03 2.00e-43 169.00
IUUC-Uma-129584 Ustilago maydis 25.57 6.00e-27 115.00
IUUC-Vda-129823 Verticillium dahliae 27.18 3.00e-30 125.00
IUUC-Vpa-130167 Vicugna pacos 29.06 2.00e-29 122.00
IUUC-Vvi-131646 Vitis vinifera 27.03 5.00e-31 127.00
IUUC-Xtr-131785 Xenopus tropicalis 30.11 2.00e-41 161.00
IUUC-Xma-133644 Xiphophorus maculatus 28.39 3.00e-42 165.00
IUUC-Yli-134405 Yarrowia lipolytica 26.00 2.00e-29 123.00
IUUC-Zma-135969 Zea mays 27.24 3.00e-34 138.00
Created Date 25-Jun-2017

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