iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000006421.2	ENSCJAT00000012780.1	ENSCJAP00000012119.1
ENSCJAG00000006421.2	ENSCJAT00000012801.2	ENSCJAP00000012139.2
ENSCJAG00000006421.2	ENSCJAT00000012635.1	ENSCJAP00000011982.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.00e-09	36.7	1264	1312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C++C+++g+ e ++v C+ C++  H  C+ ++  +++p+ + w+Cp+Cr 
   Q: 1264 ARCKICRKKGDAE-NMVLCDGCDRGHHTYCVRPK-LKTVPEGD-WFCPECRP 1312
           57*********98.6*******************.*******7.******96 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MEDASESSRG VAPLINNVAL PGSPLSLPVS VTGCKSHRVA NKKVEAMSEK LLPIALPPSE 60
PKVDQKLPRS SERRGSGGGT RFPARSRAVA AGEAAAGGAA GPARGGPPGG RVSPRCLCSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTCCTAT CGTGTAGTCA AACGTCGGTA CCAGACTTGA AGGCTTTACT TTGTTAGCCA 60
TGTGTTTATG AACCCCCAGC GCTTTCCCTA GATCTTTTGG CTGATAATCT CAAACATGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR013136--WSTF_Acf1_Cbp146
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50827--DDT
PS51136--WAC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF02791--DDT
PF00628--PHD
PF10537--WAC_Acf1_DNA_bd
PF15612--WHIM1
PF15613--WSD

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008623--C:CHRAC
GO:0008270--F:zinc ion binding
GO:0006261--P:DNA-dependent DNA replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002389	Ailuropoda melanoleuca	89.49	0.00e+00	1803.00
IUUC-Atr-003084	Amborella trichopoda	43.56	9.00e-12	67.00
IUUC-Apl-004078	Anas platyrhynchos	70.67	0.00e+00	1901.00
IUUC-Aca-004951	Anolis carolinensis	69.31	0.00e+00	1336.00
IUUC-Bta-012850	Bos taurus	90.35	0.00e+00	1342.00
IUUC-Cel-018523	Caenorhabditis elegans	47.83	1.00e-16	82.80
IUUC-Cfa-020916	Canis familiaris	91.46	0.00e+00	1345.00
IUUC-Cpo-022146	Cavia porcellus	79.71	0.00e+00	2097.00
IUUC-Csa-024039	Chlorocebus sabaeus	92.59	0.00e+00	1387.00
IUUC-Cho-024914	Choloepus hoffmanni	79.33	0.00e+00	1215.00
IUUC-Cin-025450	Ciona intestinalis	43.35	1.00e-41	164.00
IUUC-Csv-026068	Ciona savignyi	54.55	4.00e-39	153.00
IUUC-Dre-027413	Danio rerio	55.99	0.00e+00	714.00
IUUC-Dno-029438	Dasypus novemcinctus	89.24	0.00e+00	1763.00
IUUC-Dor-030774	Dipodomys ordii	80.15	1.00e-161	564.00
IUUC-Dme-031772	Drosophila melanogaster	26.60	2.00e-39	158.00
IUUC-Ete-033052	Echinops telfairi	85.89	0.00e+00	987.00
IUUC-Eca-034262	Equus caballus	89.50	0.00e+00	1728.00
IUUC-Eeu-034704	Erinaceus europaeus	92.40	2.00e-133	471.00
IUUC-Fca-036207	Felis catus	93.06	0.00e+00	912.00
IUUC-Fal-036702	Ficedula albicollis	72.13	0.00e+00	1583.00
IUUC-Gmo-039218	Gadus morhua	48.29	3.00e-94	340.00
IUUC-Gga-040776	Gallus gallus	73.76	0.00e+00	1352.00
IUUC-Gac-042358	Gasterosteus aculeatus	51.23	0.00e+00	655.00
IUUC-Hsa-046560	Homo sapiens	94.73	0.00e+00	2021.00
IUUC-Itr-048135	Ictidomys tridecemlineatus	90.62	0.00e+00	1289.00
IUUC-Laf-054049	Loxodonta africana	88.81	0.00e+00	1796.00
IUUC-Mga-059382	Meleagris gallopavo	74.33	0.00e+00	1822.00
IUUC-Mmr-061301	Microcebus murinus	89.62	0.00e+00	1324.00
IUUC-Mdo-062889	Monodelphis domestica	77.62	0.00e+00	1468.00
IUUC-Mmu-064057	Mus musculus	84.21	0.00e+00	2165.00
IUUC-Mpu-066668	Mustela putorius furo	88.73	0.00e+00	1803.00
IUUC-Mlu-068089	Myotis lucifugus	89.96	0.00e+00	1314.00
IUUC-Nle-069936	Nomascus leucogenys	93.94	0.00e+00	1403.00
IUUC-Oan-073582	Ornithorhynchus anatinus	84.64	0.00e+00	1610.00
IUUC-Ocu-074115	Oryctolagus cuniculus	85.10	0.00e+00	2371.00
IUUC-Ogu-078790	Oryza glumaepatula	46.43	2.00e-13	70.10
IUUC-Ome-081195	Oryza meridionalis	50.98	2.00e-13	69.70
IUUC-Oru-084688	Oryza rufipogon	46.43	2.00e-13	70.10
IUUC-Ola-086709	Oryzias latipes	54.18	0.00e+00	948.00
IUUC-Oga-088100	Otolemur garnettii	92.80	0.00e+00	1297.00
IUUC-Oar-089208	Ovis aries	90.72	0.00e+00	1298.00
IUUC-Ptr-090630	Pan troglodytes	93.69	0.00e+00	1397.00
IUUC-Pan-092146	Papio anubis	89.68	0.00e+00	1345.00
IUUC-Psi-092932	Pelodiscus sinensis	74.58	0.00e+00	1379.00
IUUC-Ppa-095893	Physcomitrella patens	55.56	8.00e-13	70.90
IUUC-Pfo-096572	Poecilia formosa	52.64	0.00e+00	688.00
IUUC-Pva-102893	Pteropus vampyrus	90.36	0.00e+00	1333.00
IUUC-Rno-105098	Rattus norvegicus	83.34	0.00e+00	2093.00
IUUC-Sha-106513	Sarcophilus harrisii	77.52	0.00e+00	1489.00
IUUC-Sar-113192	Sorex araneus	96.43	2.00e-107	384.00
IUUC-Ssc-116407	Sus scrofa	90.52	0.00e+00	1299.00
IUUC-Tgu-117403	Taeniopygia guttata	74.20	0.00e+00	1883.00
IUUC-Tru-118124	Takifugu rubripes	51.90	0.00e+00	657.00
IUUC-Tsy-119386	Tarsius syrichta	91.11	0.00e+00	1333.00
IUUC-Vpa-130046	Vicugna pacos	88.62	0.00e+00	1617.00
IUUC-Xtr-132132	Xenopus tropicalis	59.52	0.00e+00	1042.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence