iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017328

Ensembl Protein ID

Bra023582.1-P

UniProt Accession

M4E479; M4E479_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023582	Bra023582.1	Bra023582.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-59	194.0	139	172
UBD/Beta-Prp	9.00e-110	367.5	410	664

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd...tllvsGsdDgtikvWDl 30
           gH++ v+++ f +d   ++l+sGsdD t++vWDl
   Q: 139  GHKGVVSSVLFhPDankNILISGSDDATVRVWDL 172
           8********9**5554688**************8 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfsp 104
            ++ l++tgs+d+t+++w++t+++++    gh++ + av f +++  ++v+gs Drt+kvw+l+          + k+ +++ +h++++ s+++ +
   Q: 410  SGNVLVVTGSKDKTVRLWNATSQSCIGVGTGHNGDILAVAFAKKSFsFFVSGSGDRTLKVWSLDgisedseepiNLKTRSVVAAHDKDINSVAVAR 505
           455678999999999999999999999999999999999998775459999999999999977777888888889999999999999999999999 PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsl 200
           +++ + +Gs+drt+ +w l+    +  tl+gh++ + +v+++p +++++++s D+tv++W ++ g++l+t++g ht+sv   sf  +g+++vs++ 
   Q: 506  NDSLVCTGSEDRTASIWRLPDLVHVV-TLKGHKRRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEG-HTSSVLRASFITDGTQFVSCGA 599
           99999999999999999999999999.9999999999999999999999999999999999999999999998.9999999999999999999999 PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           dg +klw++ t+ec  t+  h+d v+ +++ +++e +++g+ D +i+iW d++ +d    + +++
   Q: 600  DGLLKLWNVNTSECTATYDQHEDKVWALAVGKKTEMVATGGGDAVINIWhDSTASDKEDEFRKEE 664
           99999999999999999999999999999999999999999999999999888888887777766 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAPQSLKKNY RCSRSLKQFY SGGPFVVSSD GSFIVCACGD AINIVDASDS SVKSTIEGES 60
DTLTALALSP DDKLLFSGGH SRQIRVWDLE TLKCIRTWKG PVMGMACHAS GGLLATAGAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCTC AGTCGTTGAA GAAGAACTAT CGTTGCTCTC GATCTCTAAA GCAGTTCTAC 60
AGCGGCGGTC CTTTCGTCGT TTCCTCTGAC GGTTCTTTCA TCGTCTGCGC ATGTGGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	57.26	0.00e+00	960.00
IUUC-Apl-003519	Anas platyrhynchos	32.04	1.00e-102	367.00
IUUC-Aca-004363	Anolis carolinensis	33.77	6.00e-73	267.00
IUUC-Bol-016483	Brassica oleracea	96.34	0.00e+00	1599.00
IUUC-Cel-018664	Caenorhabditis elegans	27.72	3.00e-91	329.00
IUUC-Cin-025560	Ciona intestinalis	34.40	7.00e-140	491.00
IUUC-Dre-028138	Danio rerio	35.66	2.00e-146	513.00
IUUC-Fal-036859	Ficedula albicollis	37.41	3.00e-156	545.00
IUUC-Gmo-038711	Gadus morhua	34.47	1.00e-135	476.00
IUUC-Gga-040263	Gallus gallus	36.84	1.00e-154	540.00
IUUC-Gac-041291	Gasterosteus aculeatus	36.54	2.00e-154	540.00
IUUC-Loc-052679	Lepisosteus oculatus	37.42	7.00e-166	577.00
IUUC-Mga-060080	Meleagris gallopavo	35.99	2.00e-153	535.00
IUUC-Mvi-060338	Microbotryum violaceum	32.47	3.00e-133	469.00
IUUC-Oan-073491	Ornithorhynchus anatinus	34.35	2.00e-123	436.00
IUUC-Ola-086370	Oryzias latipes	29.61	3.00e-71	263.00
IUUC-Psi-093200	Pelodiscus sinensis	37.25	5.00e-156	544.00
IUUC-Pfo-096132	Poecilia formosa	37.11	1.00e-151	530.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.13	5.00e-94	338.00
IUUC-Stu-112718	Solanum tuberosum	72.06	2.00e-52	197.00
IUUC-Sar-113586	Sorex araneus	36.60	2.00e-19	90.50
IUUC-Tgu-117320	Taeniopygia guttata	36.01	1.00e-141	496.00
IUUC-Tru-118024	Takifugu rubripes	35.89	8.00e-150	524.00
IUUC-Tni-119971	Tetraodon nigroviridis	35.04	2.00e-151	529.00
IUUC-Tur-126436	Triticum urartu	58.89	0.00e+00	858.00
IUUC-Tme-126942	Tuber melanosporum	31.44	9.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence