iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114080

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G061700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g004940	Sb07g004940.1	Sb07g004940.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.70	2.00e-134	478.00	IUUC-Hsa-046635

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEAGGGGGQL FSVDPLERQA ARGHGVVTSM AAGSDVIVLG TSRGWLVRHD FSFEDAHDLD 60
LGSGRSGDHS VHRVFLDPGG KHCVATVVHP GGVETYYHHA RWPRPKPLPR LRGLLVNAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCTCTGGGT CGTCGGCGAG CCCGCACACG CGACGCGACC GCCGCAGCGA TCCCGCCCCG 60
CCCGTCGGCG CCGGCGGACC TAGACCGCCT CCGCTCCGCA GCTTCTCGCT CAGGCCTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR

Pfam

PF00637--Clathrin
PF05131--Pep3_Vps18

Gene Ontology

GO:0005768--C:endosome
GO:0030897--C:HOPS complex
GO:0030674--F:protein binding, bridging
GO:0007032--P:endosome organization
GO:0006886--P:intracellular protein transport
GO:0007040--P:lysosome organization
GO:0035542--P:regulation of SNARE complex assembly
GO:0006904--P:vesicle docking involved in exocytosis

KEGG

sbi:SORBI_07g004940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000419	Aegilops tauschii	82.20	0.00e+00	1557.00
IUUC-Aml-001240	Ailuropoda melanoleuca	34.50	5.00e-145	507.00
IUUC-Atr-003125	Amborella trichopoda	65.04	0.00e+00	1261.00
IUUC-Apl-004181	Anas platyrhynchos	33.74	4.00e-143	501.00
IUUC-Aca-004437	Anolis carolinensis	34.55	7.00e-140	490.00
IUUC-Aly-006046	Arabidopsis lyrata	69.64	0.00e+00	1467.00
IUUC-Ath-006932	Arabidopsis thaliana	70.79	0.00e+00	1446.00
IUUC-Ago-007800	Ashbya gossypii	24.90	3.00e-61	229.00
IUUC-Acl-008035	Aspergillus clavatus	31.45	1.00e-118	420.00
IUUC-Afl-008714	Aspergillus flavus	31.06	3.00e-118	419.00
IUUC-Afu-009063	Aspergillus fumigatus	31.28	5.00e-116	411.00
IUUC-Ani-009384	Aspergillus nidulans	32.03	2.00e-123	436.00
IUUC-Ang-009507	Aspergillus niger	31.96	3.00e-118	418.00
IUUC-Aor-010094	Aspergillus oryzae	31.06	6.00e-118	417.00
IUUC-Ate-010421	Aspergillus terreus	32.27	7.00e-110	390.00
IUUC-Ame-011797	Astyanax mexicanus	36.20	4.00e-158	551.00
IUUC-Bgr-012107	Blumeria graminis	31.63	3.00e-110	392.00
IUUC-Bta-012339	Bos taurus	34.56	1.00e-153	536.00
IUUC-Bci-013895	Botrytis cinerea	33.44	5.00e-119	421.00
IUUC-Bdi-014554	Brachypodium distachyon	92.01	0.00e+00	1817.00
IUUC-Bol-015270	Brassica oleracea	71.81	0.00e+00	1477.00
IUUC-Bra-017424	Brassica rapa	69.46	0.00e+00	1415.00
IUUC-Cel-018455	Caenorhabditis elegans	24.12	1.00e-51	197.00
IUUC-Cja-019629	Callithrix jacchus	34.91	9.00e-147	513.00
IUUC-Cfa-020425	Canis familiaris	34.29	5.00e-143	501.00
IUUC-Cpo-021349	Cavia porcellus	34.77	2.00e-147	515.00
IUUC-Cre-022799	Chlamydomonas reinhardtii	30.07	3.00e-56	213.00
IUUC-Csa-023559	Chlorocebus sabaeus	34.70	6.00e-146	511.00
IUUC-Cho-024862	Choloepus hoffmanni	30.50	6.00e-60	224.00
IUUC-Cin-025599	Ciona intestinalis	31.33	2.00e-119	422.00
IUUC-Csv-026152	Ciona savignyi	32.93	3.00e-135	475.00
IUUC-Cgl-026551	Colletotrichum gloeosporioides	32.47	5.00e-115	408.00
IUUC-Cne-026907	Cryptococcus neoformans	33.29	4.00e-102	365.00
IUUC-Dre-027747	Danio rerio	35.44	3.00e-161	561.00
IUUC-Dno-029668	Dasypus novemcinctus	35.04	4.00e-146	511.00
IUUC-Dor-030404	Dipodomys ordii	35.71	2.00e-146	512.00
IUUC-Dse-031345	Dothistroma septosporum	32.35	2.00e-116	412.00
IUUC-Dme-031711	Drosophila melanogaster	29.49	2.00e-101	362.00
IUUC-Ete-032308	Echinops telfairi	37.81	9.00e-95	340.00
IUUC-Eca-033637	Equus caballus	34.60	7.00e-145	507.00
IUUC-Eeu-035151	Erinaceus europaeus	36.25	6.00e-125	441.00
IUUC-Fca-035585	Felis catus	34.60	2.00e-144	506.00
IUUC-Fal-037122	Ficedula albicollis	34.09	1.00e-139	490.00
IUUC-Fox-038030	Fusarium oxysporum	32.80	5.00e-121	428.00
IUUC-Fso-038426	Fusarium solani	32.97	1.00e-125	443.00
IUUC-Gmo-038784	Gadus morhua	36.19	2.00e-156	545.00
IUUC-Ggr-039973	Gaeumannomyces graminis	33.77	9.00e-103	367.00
IUUC-Gga-040692	Gallus gallus	33.74	3.00e-143	501.00
IUUC-Gac-041868	Gasterosteus aculeatus	36.38	5.00e-161	561.00
IUUC-Gma-044274	Glycine max	72.18	0.00e+00	1484.00
IUUC-Ggo-045053	Gorilla gorilla	34.60	9.00e-145	506.00
IUUC-Hsa-046635	Homo sapiens	34.70	3.00e-145	508.00
IUUC-Hvu-047361	Hordeum vulgare	91.21	0.00e+00	1748.00
IUUC-Itr-048868	Ictidomys tridecemlineatus	34.50	2.00e-144	506.00
IUUC-Kpa-049270	Komagataella pastoris	26.55	1.00e-71	263.00
IUUC-Lch-050188	Latimeria chalumnae	35.41	2.00e-147	515.00
IUUC-Lpe-051026	Leersia perrieri	89.35	0.00e+00	1825.00
IUUC-Loc-051821	Lepisosteus oculatus	35.31	3.00e-149	521.00
IUUC-Lma-053178	Leptosphaeria maculans	35.98	1.00e-102	366.00
IUUC-Laf-053552	Loxodonta africana	34.87	3.00e-145	508.00
IUUC-Mcc-054667	Macaca mulatta	34.70	3.00e-145	508.00
IUUC-Meu-056422	Macropus eugenii	39.51	6.00e-91	328.00
IUUC-Mor-056981	Magnaporthe oryzae	32.73	9.00e-119	420.00
IUUC-Mtr-058703	Medicago truncatula	71.30	0.00e+00	1473.00
IUUC-Mla-059088	Melampsora laricipopulina	37.81	3.00e-108	384.00
IUUC-Mga-059798	Meleagris gallopavo	33.81	6.00e-143	500.00
IUUC-Mvi-060404	Microbotryum violaceum	34.69	2.00e-127	449.00
IUUC-Mmr-061630	Microcebus murinus	34.80	1.00e-145	509.00
IUUC-Mdo-062354	Monodelphis domestica	34.67	2.00e-154	538.00
IUUC-Mmu-063199	Mus musculus	34.60	2.00e-144	505.00
IUUC-Mac-065595	Musa acuminata	76.68	0.00e+00	1238.00
IUUC-Mpu-066596	Mustela putorius furo	34.56	3.00e-145	508.00
IUUC-Mlu-067455	Myotis lucifugus	34.36	3.00e-143	501.00
IUUC-Nfi-068565	Neosartorya fischeri	31.14	5.00e-117	414.00
IUUC-Ncr-068748	Neurospora crassa	31.89	3.00e-125	442.00
IUUC-Nle-068979	Nomascus leucogenys	35.32	9.00e-128	450.00
IUUC-Opr-070711	Ochotona princeps	35.22	3.00e-146	512.00
IUUC-Ont-072603	Oreochromis niloticus	36.70	9.00e-162	563.00
IUUC-Oan-073136	Ornithorhynchus anatinus	39.17	8.00e-93	333.00
IUUC-Ocu-074496	Oryctolagus cuniculus	34.67	7.00e-144	504.00
IUUC-Oba-075933	Oryza barthii	82.81	0.00e+00	1607.00
IUUC-Obr-076290	Oryza brachyantha	91.41	0.00e+00	1842.00
IUUC-Ogu-078728	Oryza glumaepatula	83.11	0.00e+00	1614.00
IUUC-Oin-079954	Oryza indica	87.97	0.00e+00	1747.00
IUUC-Olo-081033	Oryza longistaminata	81.86	0.00e+00	1498.00
IUUC-Ome-081797	Oryza meridionalis	84.53	0.00e+00	1687.00
IUUC-Oni-082802	Oryza nivara	83.11	0.00e+00	1614.00
IUUC-Opu-083595	Oryza punctata	88.78	0.00e+00	1763.00
IUUC-Oru-084199	Oryza rufipogon	83.11	0.00e+00	1614.00
IUUC-Osa-085349	Oryza sativa	91.62	0.00e+00	1848.00
IUUC-Ola-087482	Oryzias latipes	36.49	5.00e-158	551.00
IUUC-Olu-087797	Ostreococcus lucimarinus	29.67	1.00e-103	370.00
IUUC-Oga-088817	Otolemur garnettii	34.80	5.00e-147	514.00
IUUC-Oar-090350	Ovis aries	33.51	6.00e-107	380.00
IUUC-Ptr-090999	Pan troglodytes	34.70	3.00e-145	508.00
IUUC-Pan-092704	Papio anubis	34.70	3.00e-145	508.00
IUUC-Psi-093529	Pelodiscus sinensis	34.59	1.00e-140	493.00
IUUC-Pma-094400	Petromyzon marinus	35.22	7.00e-156	543.00
IUUC-Pno-094875	Phaeosphaeria nodorum	33.10	2.00e-124	439.00
IUUC-Ppa-095231	Physcomitrella patens	55.38	0.00e+00	1077.00
IUUC-Pfo-096967	Poecilia formosa	36.83	5.00e-161	560.00
IUUC-Pab-098300	Pongo abelii	34.70	5.00e-145	507.00
IUUC-Pop-098966	Populus trichocarpa	73.64	0.00e+00	1530.00
IUUC-Pca-100643	Procavia capensis	35.29	1.00e-135	476.00
IUUC-Ppe-101589	Prunus persica	74.36	0.00e+00	1496.00
IUUC-Pva-102766	Pteropus vampyrus	33.98	2.00e-134	472.00
IUUC-Pgr-103330	Puccinia graminis	32.68	3.00e-123	436.00
IUUC-Ptt-103809	Puccinia triticina	36.06	2.00e-116	412.00
IUUC-Pte-104319	Pyrenophora teres	31.98	6.00e-122	431.00
IUUC-Pyt-104798	Pyrenophora triticirepentis	33.41	8.00e-115	407.00
IUUC-Rno-105817	Rattus norvegicus	34.56	3.00e-144	505.00
IUUC-Sce-106255	Saccharomyces cerevisiae	24.29	1.00e-58	220.00
IUUC-Sha-107479	Sarcophilus harrisii	34.46	3.00e-154	538.00
IUUC-Sja-107976	Schizosaccharomyces japonicus	25.58	1.00e-62	234.00
IUUC-Spo-108146	Schizosaccharomyces pombe	24.37	1.00e-63	237.00
IUUC-Ssl-108663	Sclerotinia sclerotiorum	34.01	4.00e-111	395.00
IUUC-Smo-109585	Selaginella moellendorffii	52.37	0.00e+00	1002.00
IUUC-Sit-110275	Setaria italica	96.98	0.00e+00	1909.00
IUUC-Sly-111073	Solanum lycopersicum	73.22	0.00e+00	1496.00
IUUC-Stu-112392	Solanum tuberosum	65.73	9.00e-72	261.00
IUUC-Sar-113718	Sorex araneus	33.71	9.00e-137	480.00
IUUC-Sre-115160	Sporisorium reilianum	32.02	2.00e-124	439.00
IUUC-Ssc-115997	Sus scrofa	34.91	5.00e-147	514.00
IUUC-Tgu-116904	Taeniopygia guttata	34.50	5.00e-138	484.00
IUUC-Tru-117946	Takifugu rubripes	35.82	3.00e-160	558.00
IUUC-Tni-119692	Tetraodon nigroviridis	36.22	4.00e-158	551.00
IUUC-Tca-121455	Theobroma cacao	74.87	0.00e+00	1540.00
IUUC-Tre-122128	Trichoderma reesei	32.92	3.00e-118	419.00
IUUC-Tvi-122657	Trichoderma virens	33.03	3.00e-120	425.00
IUUC-Tae-125953	Triticum aestivum	91.52	0.00e+00	1774.00
IUUC-Tur-126110	Triticum urartu	78.56	0.00e+00	1377.00
IUUC-Tme-127173	Tuber melanosporum	33.53	3.00e-107	382.00
IUUC-Ttr-128420	Tursiops truncatus	34.29	5.00e-151	527.00
IUUC-Uma-129580	Ustilago maydis	31.67	5.00e-125	441.00
IUUC-Vda-129790	Verticillium dahliae	31.67	1.00e-110	393.00
IUUC-Vvi-131095	Vitis vinifera	74.28	0.00e+00	1504.00
IUUC-Xtr-131906	Xenopus tropicalis	35.28	3.00e-147	515.00
IUUC-Xma-134197	Xiphophorus maculatus	37.20	3.00e-161	561.00
IUUC-Yli-134617	Yarrowia lipolytica	26.89	2.00e-91	329.00
IUUC-Zma-134979	Zea mays	94.96	0.00e+00	1255.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence