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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105976
UUCD1 version UUC-RaN-01028
Ensembl Protein ID ENSRNOP00000030043.4
UniProt Accession D4A7T9; D4A7T9_RAT
Genbank Protein ID ENSRNOP00000030043
Protein Name Myb-like, SWIRM and MPN domains 1
Genbank Nucleotide ID AABR07049286
Gene Name Mysm1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000026299.6 ENSRNOT00000039554.6 ENSRNOP00000030043.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
DUB/JAMM 78.15 0.00e+00 1203.00 IUUC-Hsa-046902
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEAEEADVDV EGDVAAAAQP GNDGNTASVF QDHYLDSTWR RENGCLPWTL DSTISDENRA 60
VIEKMLLEEE YYLSNKSLPG KFWVNQKEND KKCTNSLQKT GKIMVRSPAK PSSYSVKWTI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105976|DUB,JAMM|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCTTTCCCCG GAAGTGCGCC ACACCACAGG CCCCGCCTCC GGTCCCGCCC CCGACCCGCC 60
GCATCTCGCG GGATCTCACG AGTACGCCTG TGTCAAGTGC AGTCATGGAA GCTGAGGAGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105976|DUB,JAMM|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
Interpro

IPR009057--Homeobox-like
IPR000555--JAMM/MPN+_dom
IPR033497--MYSM1
IPR001005--SANT/Myb
IPR017884--SANT_dom
IPR007526--SWIRM
IPR011991--WHTH_DNA-bd_dom
PROSITE

PS51293--SANT
PS50934--SWIRM
Pfam

PF01398--JAB
PF00249--Myb_DNA-binding
PF04433--SWIRM
SMART

SM00232--JAB_MPN
SM00717--SANT
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:0003677--F:DNA binding
GO:0008237--F:metallopeptidase activity
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0003713--F:transcription coactivator activity
GO:0006338--P:chromatin remodeling
GO:0035522--P:monoubiquitinated histone H2A deubiquitination
GO:0043473--P:pigmentation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0051797--P:regulation of hair follicle development
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001270 Ailuropoda melanoleuca 79.37 0.00e+00 1249.00
IUUC-Apl-003363 Anas platyrhynchos 69.58 0.00e+00 984.00
IUUC-Aca-005139 Anolis carolinensis 66.11 0.00e+00 1008.00
IUUC-Ame-011693 Astyanax mexicanus 55.84 0.00e+00 660.00
IUUC-Bta-013079 Bos taurus 78.10 0.00e+00 1198.00
IUUC-Cja-019242 Callithrix jacchus 76.87 0.00e+00 1184.00
IUUC-Cfa-020562 Canis familiaris 77.97 0.00e+00 1167.00
IUUC-Cpo-021656 Cavia porcellus 75.55 0.00e+00 1127.00
IUUC-Cre-022774 Chlamydomonas reinhardtii 34.96 6.00e-16 78.60
IUUC-Csa-023482 Chlorocebus sabaeus 77.56 0.00e+00 1197.00
IUUC-Cho-024724 Choloepus hoffmanni 75.77 1.00e-76 281.00
IUUC-Cme-027237 Cyanidioschyzon merolae 40.24 7.00e-31 129.00
IUUC-Dre-028234 Danio rerio 54.25 0.00e+00 739.00
IUUC-Dno-029985 Dasypus novemcinctus 74.35 0.00e+00 1039.00
IUUC-Dor-030957 Dipodomys ordii 70.93 0.00e+00 1022.00
IUUC-Ete-032831 Echinops telfairi 69.12 0.00e+00 1002.00
IUUC-Eca-033285 Equus caballus 76.98 0.00e+00 1193.00
IUUC-Eeu-035164 Erinaceus europaeus 64.00 0.00e+00 877.00
IUUC-Fca-036480 Felis catus 76.43 0.00e+00 1139.00
IUUC-Fal-037081 Ficedula albicollis 67.58 0.00e+00 956.00
IUUC-Gmo-039445 Gadus morhua 62.73 9.00e-157 547.00
IUUC-Gga-040639 Gallus gallus 70.10 0.00e+00 1021.00
IUUC-Gac-042370 Gasterosteus aculeatus 63.88 1.00e-151 530.00
IUUC-Ggo-044894 Gorilla gorilla 78.19 0.00e+00 1207.00
IUUC-Hsa-046902 Homo sapiens 78.07 0.00e+00 1205.00
IUUC-Itr-047908 Ictidomys tridecemlineatus 78.78 0.00e+00 1049.00
IUUC-Lch-049854 Latimeria chalumnae 60.15 0.00e+00 857.00
IUUC-Loc-052310 Lepisosteus oculatus 70.39 0.00e+00 632.00
IUUC-Laf-053369 Loxodonta africana 78.02 0.00e+00 1218.00
IUUC-Mcc-055385 Macaca mulatta 78.19 0.00e+00 1198.00
IUUC-Meu-056008 Macropus eugenii 59.48 0.00e+00 842.00
IUUC-Mga-059526 Meleagris gallopavo 65.85 0.00e+00 921.00
IUUC-Mmr-060949 Microcebus murinus 79.16 0.00e+00 1248.00
IUUC-Mdo-061821 Monodelphis domestica 70.46 0.00e+00 1079.00
IUUC-Mmu-064166 Mus musculus 89.79 0.00e+00 1393.00
IUUC-Mpu-065701 Mustela putorius furo 78.17 0.00e+00 1224.00
IUUC-Mlu-067089 Myotis lucifugus 77.68 0.00e+00 1224.00
IUUC-Nle-069917 Nomascus leucogenys 77.74 0.00e+00 1198.00
IUUC-Opr-070449 Ochotona princeps 64.99 0.00e+00 915.00
IUUC-Ont-071468 Oreochromis niloticus 65.17 3.00e-156 545.00
IUUC-Ocu-073867 Oryctolagus cuniculus 72.37 0.00e+00 652.00
IUUC-Ola-087430 Oryzias latipes 47.47 3.00e-166 578.00
IUUC-Olu-087581 Ostreococcus lucimarinus 34.11 6.00e-31 128.00
IUUC-Oga-088967 Otolemur garnettii 77.23 0.00e+00 1167.00
IUUC-Oar-089773 Ovis aries 77.98 0.00e+00 1194.00
IUUC-Ptr-091260 Pan troglodytes 78.07 0.00e+00 1207.00
IUUC-Pan-092564 Papio anubis 77.71 0.00e+00 1192.00
IUUC-Psi-094097 Pelodiscus sinensis 70.60 0.00e+00 946.00
IUUC-Pma-094538 Petromyzon marinus 65.00 1.00e-37 150.00
IUUC-Pfo-097392 Poecilia formosa 49.38 0.00e+00 682.00
IUUC-Pab-098496 Pongo abelii 77.14 0.00e+00 1188.00
IUUC-Pca-100438 Procavia capensis 51.08 9.00e-136 477.00
IUUC-Pva-103082 Pteropus vampyrus 78.00 0.00e+00 1201.00
IUUC-Sha-106498 Sarcophilus harrisii 66.17 0.00e+00 967.00
IUUC-Sar-113274 Sorex araneus 71.31 0.00e+00 1057.00
IUUC-Sre-115088 Sporisorium reilianum 34.09 1.00e-08 55.80
IUUC-Ssc-115653 Sus scrofa 76.89 0.00e+00 1198.00
IUUC-Tgu-117140 Taeniopygia guttata 68.13 0.00e+00 970.00
IUUC-Tru-117818 Takifugu rubripes 63.83 3.00e-149 522.00
IUUC-Tsy-118897 Tarsius syrichta 74.22 0.00e+00 1100.00
IUUC-Tni-119769 Tetraodon nigroviridis 50.97 0.00e+00 663.00
IUUC-Tbe-127944 Tupaia belangeri 88.73 0.00e+00 740.00
IUUC-Ttr-129252 Tursiops truncatus 89.88 0.00e+00 733.00
IUUC-Vpa-130289 Vicugna pacos 78.09 0.00e+00 1143.00
IUUC-Xtr-131964 Xenopus tropicalis 74.22 4.00e-179 621.00
Created Date 25-Jun-2017

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