iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086862

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04084700

Gene Name

nup43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000017628.1	ENSORLT00000022056.1	ENSORLP00000022055.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-17	63.4	217	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd..tllvsGsdDgtikvWDlrtgvll 36
           + +c++  ++  +++++G+ Dg + vWD+r+g  +
   Q: 217  PLHCVDRhPNqqHIVATGGQDGMLCVWDVRQGGTP 251
           56777656444466799*************99765 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

ASISMESINA KYVSQKISKT RWCPVSYSSL QQPEVFATGS WDNEDNKVSI WSIGNHNNSG 60
LEDGFEGDPQ ILCEHKHGGD VLDLQFLDQE RMVSASSTGA VTIFRYHPNT HTISVLQHWA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGCGTAGT TTCTCGTGTA GTCCGTAAAC TGAAAACAAC ACTTCAAATT TTAACAAAAA 60
GGCTTCAATT TCCATGGAGA GCATAAATGC CAAATATGTG TCTCAGAAAA TCAGTAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	62.43	6.00e-139	486.00
IUUC-Apl-003533	Anas platyrhynchos	61.45	3.00e-114	404.00
IUUC-Aca-004965	Anolis carolinensis	59.63	3.00e-131	461.00
IUUC-Aly-006431	Arabidopsis lyrata	30.18	1.00e-12	67.40
IUUC-Ath-007253	Arabidopsis thaliana	30.36	1.00e-12	67.00
IUUC-Ame-011694	Astyanax mexicanus	74.29	4.00e-144	503.00
IUUC-Bta-013161	Bos taurus	64.55	6.00e-144	503.00
IUUC-Bdi-014758	Brachypodium distachyon	28.57	1.00e-12	67.00
IUUC-Bra-017838	Brassica rapa	27.97	2.00e-08	53.50
IUUC-Cja-020000	Callithrix jacchus	53.51	1.00e-111	395.00
IUUC-Cfa-021112	Canis familiaris	63.76	1.00e-142	499.00
IUUC-Cpo-022095	Cavia porcellus	62.80	2.00e-139	488.00
IUUC-Csa-023460	Chlorocebus sabaeus	62.70	5.00e-140	490.00
IUUC-Cho-024279	Choloepus hoffmanni	61.83	2.00e-115	408.00
IUUC-Cin-025360	Ciona intestinalis	36.07	4.00e-60	224.00
IUUC-Csv-026301	Ciona savignyi	36.77	4.00e-52	197.00
IUUC-Dre-028097	Danio rerio	69.62	2.00e-160	558.00
IUUC-Dno-029131	Dasypus novemcinctus	63.23	4.00e-139	487.00
IUUC-Dor-030496	Dipodomys ordii	53.66	2.00e-114	405.00
IUUC-Dme-031834	Drosophila melanogaster	27.25	1.00e-43	169.00
IUUC-Ete-032448	Echinops telfairi	65.76	2.00e-115	408.00
IUUC-Eca-034409	Equus caballus	63.49	4.00e-143	500.00
IUUC-Eeu-035343	Erinaceus europaeus	64.29	3.00e-80	292.00
IUUC-Fca-036177	Felis catus	63.49	1.00e-141	496.00
IUUC-Fal-037657	Ficedula albicollis	58.98	1.00e-127	449.00
IUUC-Gmo-038946	Gadus morhua	75.94	3.00e-171	594.00
IUUC-Gga-041070	Gallus gallus	61.27	3.00e-132	464.00
IUUC-Gac-042442	Gasterosteus aculeatus	81.87	0.00e+00	657.00
IUUC-Gma-043812	Glycine max	26.87	5.00e-09	55.10
IUUC-Ggo-045223	Gorilla gorilla	62.43	4.00e-141	494.00
IUUC-Hsa-045956	Homo sapiens	62.70	3.00e-141	494.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	63.32	4.00e-140	490.00
IUUC-Lch-050035	Latimeria chalumnae	64.71	4.00e-148	517.00
IUUC-Laf-053404	Loxodonta africana	62.37	1.00e-138	485.00
IUUC-Mcc-055813	Macaca mulatta	62.96	1.00e-140	492.00
IUUC-Meu-056388	Macropus eugenii	65.24	3.00e-81	295.00
IUUC-Mga-060193	Meleagris gallopavo	59.68	4.00e-138	484.00
IUUC-Mmr-060818	Microcebus murinus	63.49	7.00e-141	493.00
IUUC-Mdo-062822	Monodelphis domestica	63.49	2.00e-142	498.00
IUUC-Mmu-064182	Mus musculus	63.49	2.00e-141	494.00
IUUC-Mpu-066865	Mustela putorius furo	63.61	8.00e-127	446.00
IUUC-Mlu-067329	Myotis lucifugus	61.90	2.00e-135	475.00
IUUC-Nle-069093	Nomascus leucogenys	63.23	2.00e-141	495.00
IUUC-Opr-070481	Ochotona princeps	58.89	1.00e-126	446.00
IUUC-Ont-072445	Oreochromis niloticus	84.68	0.00e+00	669.00
IUUC-Oan-073029	Ornithorhynchus anatinus	58.09	9.00e-127	446.00
IUUC-Ocu-074275	Oryctolagus cuniculus	62.96	7.00e-141	493.00
IUUC-Oga-088952	Otolemur garnettii	64.55	9.00e-143	499.00
IUUC-Oar-089300	Ovis aries	64.81	2.00e-144	505.00
IUUC-Ptr-091389	Pan troglodytes	62.96	2.00e-141	495.00
IUUC-Pan-092174	Papio anubis	62.96	2.00e-140	491.00
IUUC-Psi-093326	Pelodiscus sinensis	63.42	1.00e-128	452.00
IUUC-Pfo-096331	Poecilia formosa	81.18	0.00e+00	635.00
IUUC-Pab-098306	Pongo abelii	63.35	2.00e-142	498.00
IUUC-Pop-099166	Populus trichocarpa	31.21	9.00e-12	64.30
IUUC-Pca-100455	Procavia capensis	59.33	2.00e-45	176.00
IUUC-Pva-102578	Pteropus vampyrus	63.16	2.00e-139	488.00
IUUC-Rno-105146	Rattus norvegicus	62.96	2.00e-134	471.00
IUUC-Sha-107640	Sarcophilus harrisii	63.78	6.00e-141	493.00
IUUC-Sar-113681	Sorex araneus	65.46	7.00e-74	270.00
IUUC-Sbi-113809	Sorghum bicolor	25.36	2.00e-05	43.50
IUUC-Ssc-116129	Sus scrofa	62.70	9.00e-140	489.00
IUUC-Tgu-117456	Taeniopygia guttata	59.43	1.00e-70	258.00
IUUC-Tru-117630	Takifugu rubripes	82.59	2.00e-122	431.00
IUUC-Tsy-119331	Tarsius syrichta	63.25	5.00e-143	500.00
IUUC-Tni-120077	Tetraodon nigroviridis	78.76	2.00e-172	597.00
IUUC-Tae-123605	Triticum aestivum	27.47	4.00e-11	62.00
IUUC-Tbe-127359	Tupaia belangeri	57.87	4.00e-121	427.00
IUUC-Ttr-128461	Tursiops truncatus	63.35	2.00e-139	488.00
IUUC-Vpa-130162	Vicugna pacos	62.63	5.00e-139	487.00
IUUC-Vvi-131114	Vitis vinifera	30.39	3.00e-11	62.40
IUUC-Xtr-132446	Xenopus tropicalis	62.53	4.00e-143	500.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence