iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.40e-07	30.3	113	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle+   ++ ++ +pC+H fh  C++kw         + +CP+Cr
   Q: 113  CVICLEEWksEETVKEMPCKHRFHGGCIEKW------LGFHGSCPVCR 154
           ******9866555999***************......99999*****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MATEQEAEVG TETSSVSGRF LRNRDLYLFL PFLLGFSDQE SSNGDDDDVA SSRERIILVN 60
PFTQGMIVLE GSSGMNPLLR SLLESREEGR PPASKASIDA MPIVEIDGCE GECVICLEEW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTCAGAGA AAAATATAAC ATAGATATTT GCTAATGGAT AAGCATATCG ATAACATCAA 60
TCATTGTCTT CAACTTAATT TATTTTAGGC CCATGGGAAG AAAAGTCTTC TGCGTTAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G26800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004858	Anolis carolinensis	45.78	2.00e-15	77.00
IUUC-Aly-006170	Arabidopsis lyrata	92.16	9.00e-110	388.00
IUUC-Bdi-014161	Brachypodium distachyon	55.88	1.00e-18	85.50
IUUC-Bol-016120	Brassica oleracea	81.08	4.00e-86	310.00
IUUC-Bra-016818	Brassica rapa	85.00	1.00e-59	221.00
IUUC-Gga-040434	Gallus gallus	43.21	9.00e-16	78.20
IUUC-Gma-042932	Glycine max	59.15	1.00e-46	179.00
IUUC-Mtr-058137	Medicago truncatula	56.45	5.00e-28	117.00
IUUC-Pop-099103	Populus trichocarpa	50.93	1.00e-51	195.00
IUUC-Ppe-101768	Prunus persica	48.97	7.00e-43	166.00
IUUC-Sly-111076	Solanum lycopersicum	56.16	5.00e-21	94.40
IUUC-Stu-112194	Solanum tuberosum	47.09	9.00e-39	152.00
IUUC-Tca-121463	Theobroma cacao	54.09	3.00e-56	210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence