iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000013841.7	ENSRNOT00000079801.1	ENSRNOP00000075456.1
ENSRNOG00000013841.7	ENSRNOT00000018932.6	ENSRNOP00000018932.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC	RAID2
Post-translational Modifications (PTMs)
PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DWD	98.53	0.00e+00	2626.00	IUUC-Hsa-046935

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

LARMSELIEK ETEEYRKGDP DPFDDRHPGR ADPECMLGHL LRILFKNDDF MNALVNAYVM 60
TSREPPLNTA ACRLLLDIMP GLETAVVFQE KEGIVENLFK WAREADQPLR TYSTGLLGGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTCTTACT GTATGGCTCT AACTGACCTG ATAGTGTTTA CTAAGTAGCC TAGGTTGGCC 60
TTGAACTTAA GGCAGGCCTC CTGCCTCAGT CTTCTGAGTG TTGGGATTAC AGGTATGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR006594--LisH
IPR033270--VPRBP/DCAF1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH

SMART

SM00667--LisH

Gene Ontology

GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000876	Aegilops tauschii	34.49	1.00e-62	235.00
IUUC-Aml-001487	Ailuropoda melanoleuca	98.53	0.00e+00	2661.00
IUUC-Apl-004137	Anas platyrhynchos	93.60	0.00e+00	2577.00
IUUC-Aca-004721	Anolis carolinensis	90.73	0.00e+00	2486.00
IUUC-Ath-007548	Arabidopsis thaliana	37.86	2.00e-65	245.00
IUUC-Ame-011378	Astyanax mexicanus	77.26	0.00e+00	2143.00
IUUC-Bta-012499	Bos taurus	97.87	0.00e+00	2636.00
IUUC-Bdi-014023	Brachypodium distachyon	34.24	1.00e-52	202.00
IUUC-Bra-017818	Brassica rapa	35.27	4.00e-61	231.00
IUUC-Cel-018657	Caenorhabditis elegans	33.14	0.00e+00	675.00
IUUC-Cja-019341	Callithrix jacchus	95.00	0.00e+00	2573.00
IUUC-Cfa-020745	Canis familiaris	98.01	0.00e+00	2640.00
IUUC-Cpo-021525	Cavia porcellus	98.38	0.00e+00	2630.00
IUUC-Csa-023213	Chlorocebus sabaeus	98.53	0.00e+00	2658.00
IUUC-Cin-025759	Ciona intestinalis	38.23	0.00e+00	862.00
IUUC-Dno-029592	Dasypus novemcinctus	98.09	0.00e+00	2641.00
IUUC-Dme-031706	Drosophila melanogaster	39.41	1.00e-166	581.00
IUUC-Ete-033014	Echinops telfairi	89.74	0.00e+00	2174.00
IUUC-Eca-034424	Equus caballus	98.45	0.00e+00	2648.00
IUUC-Eeu-034747	Erinaceus europaeus	95.33	0.00e+00	1844.00
IUUC-Fca-035608	Felis catus	98.38	0.00e+00	2659.00
IUUC-Fal-037661	Ficedula albicollis	93.38	0.00e+00	2605.00
IUUC-Gmo-039173	Gadus morhua	76.04	0.00e+00	1326.00
IUUC-Gga-040754	Gallus gallus	93.31	0.00e+00	2573.00
IUUC-Gac-042394	Gasterosteus aculeatus	74.25	0.00e+00	1307.00
IUUC-Gma-043360	Glycine max	37.53	7.00e-60	226.00
IUUC-Ggo-044876	Gorilla gorilla	96.32	0.00e+00	2586.00
IUUC-Hsa-046935	Homo sapiens	98.53	0.00e+00	2658.00
IUUC-Hvu-047505	Hordeum vulgare	34.49	6.00e-62	233.00
IUUC-Lch-050623	Latimeria chalumnae	82.83	0.00e+00	2292.00
IUUC-Lpe-051488	Leersia perrieri	35.52	8.00e-54	206.00
IUUC-Loc-052384	Lepisosteus oculatus	81.63	0.00e+00	2221.00
IUUC-Laf-053421	Loxodonta africana	98.03	0.00e+00	2640.00
IUUC-Mcc-055301	Macaca mulatta	98.65	0.00e+00	2600.00
IUUC-Meu-056281	Macropus eugenii	95.95	0.00e+00	1910.00
IUUC-Mtr-058027	Medicago truncatula	35.84	8.00e-68	253.00
IUUC-Mga-059987	Meleagris gallopavo	93.15	0.00e+00	2548.00
IUUC-Mmr-060718	Microcebus murinus	98.68	0.00e+00	2626.00
IUUC-Mdo-062744	Monodelphis domestica	95.29	0.00e+00	2584.00
IUUC-Mmu-063088	Mus musculus	99.56	0.00e+00	2640.00
IUUC-Mpu-066788	Mustela putorius furo	98.09	0.00e+00	2654.00
IUUC-Mlu-067568	Myotis lucifugus	97.79	0.00e+00	2597.00
IUUC-Nle-069773	Nomascus leucogenys	98.45	0.00e+00	2658.00
IUUC-Opr-070786	Ochotona princeps	89.20	0.00e+00	2263.00
IUUC-Ont-072210	Oreochromis niloticus	76.75	0.00e+00	2110.00
IUUC-Ocu-074945	Oryctolagus cuniculus	98.31	0.00e+00	2647.00
IUUC-Olo-080575	Oryza longistaminata	27.23	9.00e-27	117.00
IUUC-Ome-081217	Oryza meridionalis	35.51	8.00e-54	206.00
IUUC-Opu-083522	Oryza punctata	35.71	6.00e-53	204.00
IUUC-Ola-087313	Oryzias latipes	75.98	0.00e+00	2123.00
IUUC-Olu-087714	Ostreococcus lucimarinus	32.67	2.00e-53	204.00
IUUC-Oga-088943	Otolemur garnettii	93.54	0.00e+00	2447.00
IUUC-Oar-089356	Ovis aries	97.87	0.00e+00	2613.00
IUUC-Psi-093315	Pelodiscus sinensis	93.82	0.00e+00	2547.00
IUUC-Ppa-095994	Physcomitrella patens	37.11	3.00e-61	231.00
IUUC-Pfo-097433	Poecilia formosa	75.85	0.00e+00	2060.00
IUUC-Pab-098284	Pongo abelii	93.84	0.00e+00	2496.00
IUUC-Pop-099939	Populus trichocarpa	35.06	5.00e-54	207.00
IUUC-Pca-100616	Procavia capensis	88.87	0.00e+00	2285.00
IUUC-Ppe-102063	Prunus persica	37.38	5.00e-58	220.00
IUUC-Sha-107589	Sarcophilus harrisii	95.59	0.00e+00	2595.00
IUUC-Sar-112949	Sorex araneus	91.54	0.00e+00	2391.00
IUUC-Ssc-116123	Sus scrofa	98.47	0.00e+00	2508.00
IUUC-Tgu-117468	Taeniopygia guttata	90.57	0.00e+00	2528.00
IUUC-Tru-117804	Takifugu rubripes	76.87	0.00e+00	2070.00
IUUC-Tsy-118801	Tarsius syrichta	91.72	0.00e+00	2273.00
IUUC-Tni-120578	Tetraodon nigroviridis	76.57	0.00e+00	2043.00
IUUC-Tur-126857	Triticum urartu	34.49	9.00e-63	236.00
IUUC-Tbe-128066	Tupaia belangeri	88.31	0.00e+00	1734.00
IUUC-Ttr-128293	Tursiops truncatus	93.23	0.00e+00	2428.00
IUUC-Vpa-130272	Vicugna pacos	80.13	0.00e+00	832.00
IUUC-Vvi-131322	Vitis vinifera	36.41	9.00e-56	213.00
IUUC-Xtr-132357	Xenopus tropicalis	83.53	0.00e+00	2225.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence