iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000011504.1	ENSSHAT00000013570.1	ENSSHAP00000013459.1
ENSSHAG00000011504.1	ENSSHAT00000013571.1	ENSSHAP00000013460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-07	31.2	108	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..........sdtl...lvsGsdDgtikvWDlrtgvll 36
           gH++++ ++a+          +      +++ s D+t++ W++ +g+++
   Q: 108  GHEGKIDGIAYlsagehtfdgQ--KksvVCTVSTDCTVRAWNVQEGTQI 154
           7999999999989877665432..1455899************998775 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MTEGTGQAGP GMGTPAVLPL DGLLHVFSFL EPPDLLRAAQ VDKVWNEAAE SAFLWRSLSL 60
SRWTFCNISQ SSKGPQTWKQ YYLQRSQVEH QMARGRPSQD FTCKAISGHE GKIDGIAYLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNGGG CCGCCGAGAC GGAAGCGATG AGGAGGCGGG GCTGGGCGTA GCCTGGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00320--WD40

KEGG

shr:100933119

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002230	Ailuropoda melanoleuca	52.70	1.00e-133	469.00
IUUC-Aca-005353	Anolis carolinensis	54.06	7.00e-131	460.00
IUUC-Ame-011795	Astyanax mexicanus	35.56	2.00e-56	212.00
IUUC-Bra-016832	Brassica rapa	30.23	3.00e-05	42.40
IUUC-Fca-035518	Felis catus	51.53	3.00e-132	464.00
IUUC-Gmo-038690	Gadus morhua	40.95	3.00e-96	345.00
IUUC-Itr-048699	Ictidomys tridecemlineatus	53.35	9.00e-133	466.00
IUUC-Lch-050362	Latimeria chalumnae	51.71	1.00e-131	462.00
IUUC-Mdo-062716	Monodelphis domestica	75.21	0.00e+00	737.00
IUUC-Mmu-063551	Mus musculus	30.75	4.00e-59	222.00
IUUC-Mlu-067483	Myotis lucifugus	50.11	2.00e-126	446.00
IUUC-Oar-090297	Ovis aries	51.46	5.00e-142	497.00
IUUC-Psi-093976	Pelodiscus sinensis	55.88	3.00e-60	224.00
IUUC-Tae-123166	Triticum aestivum	33.71	1.00e-06	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence