iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1700__AT1G74370.1	fgenesh2_kg.2__1700__AT1G74370.1	fgenesh2_kg.2__1700__AT1G74370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-07	30.5	46	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl...qkw.....pglknssskefr......CPlCr 46
           C+iC+e+f   ++ p+vl CgH++++ Cl   q+        l+       +      CP+C+
   Q: 46   CPICWESFnvvENVPYVLWCGHTICKYCLlglQRAvviksSALPF------QlpffvaCPWCN 102
           ********999889**************95553334444433333......2445555****6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MWNLASKSIR EGFKSQGEEA ATKQRKSPSD SSGDGRRTTK EEKLECPICW ESFNVVENVP 60
YVLWCGHTIC KYCLLGLQRA VVIKSSALPF QLPFFVACPW CNILSLRLVC SGTIKFPSKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGAAACA TTGAAAGGCG TTTCAGAGTC ACCATGTTTT ACGACGCGTG TCTCTTTTTC 60
AGCGGTTTTC TCGTCGCTAC ATACATCAGA GCTTCGGATT TATATATCTC AACGACGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_476570

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004905	Anolis carolinensis	44.68	1.00e-05	45.10
IUUC-Ath-007510	Arabidopsis thaliana	90.00	6.00e-136	475.00
IUUC-Bol-015127	Brassica oleracea	74.90	7.00e-109	385.00
IUUC-Bra-016897	Brassica rapa	72.80	6.00e-106	375.00
IUUC-Cel-018405	Caenorhabditis elegans	35.23	1.00e-07	50.10
IUUC-Dme-031708	Drosophila melanogaster	52.94	4.00e-05	43.10
IUUC-Eeu-035091	Erinaceus europaeus	44.68	1.00e-05	45.10
IUUC-Mdo-063035	Monodelphis domestica	44.68	1.00e-05	45.10
IUUC-Mlu-068023	Myotis lucifugus	44.68	1.00e-05	45.10
IUUC-Opr-070587	Ochotona princeps	44.68	1.00e-05	45.10
IUUC-Ola-086665	Oryzias latipes	44.90	3.00e-05	44.30
IUUC-Pva-102431	Pteropus vampyrus	44.68	1.00e-05	45.10
IUUC-Smo-109392	Selaginella moellendorffii	40.35	7.00e-34	136.00
IUUC-Sar-113722	Sorex araneus	44.68	1.00e-05	45.10
IUUC-Tru-118270	Takifugu rubripes	50.00	3.00e-06	46.60
IUUC-Tbe-127445	Tupaia belangeri	44.68	1.00e-05	45.10
IUUC-Vpa-130054	Vicugna pacos	44.68	1.00e-05	45.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence