iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132331

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 23

Genbank Nucleotide ID

AAMC01031188

Gene Name

trim23

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000000455.3	ENSXETT00000000966.3	ENSXETP00000000966.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	91.08	0.00e+00	916.00	IUUC-Hsa-045801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

GDSGVWGLKK NFALLELLER LQNGASSQCS TVEEAMGGSG ESIVRCDEDE AHVASVYCTV 60
CATHLCADCS LNTHSTKTLA KHRRVPLADK PYEKTLCSQH QVHAIEFVCL EDGCQPSPLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGACTCTG GTGTGTGGGG CTTAAAGAAA AATTTTGCAT TACTGGAACT CCTGGAGCGG 60
TTGCAGAATG GTGCCAGTAG TCAGTGTAGC ACTGTAGAAG AGGCAATGGG CGGCTCTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0342--GTP-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR003649--Bbox_C
IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR024156--Small_GTPase_ARF
IPR006689--Small_GTPase_ARF/SAR
IPR000315--Znf_B-box

PROSITE

PS51417--ARF
PS50119--ZF_BBOX

Pfam

PF00025--Arf
PF00643--zf-B_box

PRINTS

PR00328--SAR1GTPBP

SMART

SM00502--BBC
SM00336--BBOX

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0008270--F:zinc ion binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001685	Ailuropoda melanoleuca	91.72	0.00e+00	918.00
IUUC-Apl-003280	Anas platyrhynchos	92.29	0.00e+00	951.00
IUUC-Aca-004587	Anolis carolinensis	90.47	0.00e+00	849.00
IUUC-Ame-010760	Astyanax mexicanus	90.06	0.00e+00	932.00
IUUC-Bta-013139	Bos taurus	89.96	0.00e+00	902.00
IUUC-Cel-018197	Caenorhabditis elegans	36.78	2.00e-83	303.00
IUUC-Cja-019407	Callithrix jacchus	90.87	0.00e+00	917.00
IUUC-Cfa-020758	Canis familiaris	91.80	0.00e+00	913.00
IUUC-Cpo-022050	Cavia porcellus	91.28	0.00e+00	937.00
IUUC-Csa-023938	Chlorocebus sabaeus	91.08	0.00e+00	918.00
IUUC-Cho-024793	Choloepus hoffmanni	71.95	0.00e+00	707.00
IUUC-Cin-025424	Ciona intestinalis	55.18	6.00e-156	543.00
IUUC-Csv-025949	Ciona savignyi	54.62	7.00e-152	530.00
IUUC-Dre-028835	Danio rerio	89.25	0.00e+00	922.00
IUUC-Dno-029080	Dasypus novemcinctus	82.44	0.00e+00	825.00
IUUC-Dor-031092	Dipodomys ordii	92.26	0.00e+00	877.00
IUUC-Ete-033169	Echinops telfairi	86.06	0.00e+00	781.00
IUUC-Eca-033509	Equus caballus	92.09	0.00e+00	923.00
IUUC-Eeu-034669	Erinaceus europaeus	95.58	1.00e-129	456.00
IUUC-Fca-035813	Felis catus	91.68	0.00e+00	917.00
IUUC-Fal-037222	Ficedula albicollis	91.68	0.00e+00	944.00
IUUC-Gmo-038996	Gadus morhua	87.63	0.00e+00	907.00
IUUC-Gga-040181	Gallus gallus	91.68	0.00e+00	948.00
IUUC-Gac-041763	Gasterosteus aculeatus	87.83	0.00e+00	906.00
IUUC-Ggo-044808	Gorilla gorilla	85.45	0.00e+00	857.00
IUUC-Hsa-045801	Homo sapiens	91.08	0.00e+00	918.00
IUUC-Itr-048568	Ictidomys tridecemlineatus	91.48	0.00e+00	919.00
IUUC-Lch-049531	Latimeria chalumnae	90.47	0.00e+00	933.00
IUUC-Loc-052929	Lepisosteus oculatus	90.87	0.00e+00	938.00
IUUC-Laf-053593	Loxodonta africana	91.68	0.00e+00	919.00
IUUC-Mcc-055065	Macaca mulatta	91.08	0.00e+00	918.00
IUUC-Meu-056372	Macropus eugenii	96.02	6.00e-129	454.00
IUUC-Mga-059665	Meleagris gallopavo	90.87	0.00e+00	922.00
IUUC-Mvi-060212	Microbotryum violaceum	32.61	1.40e+00	27.70
IUUC-Mmr-061643	Microcebus murinus	91.48	0.00e+00	917.00
IUUC-Mdo-062624	Monodelphis domestica	90.98	0.00e+00	926.00
IUUC-Mmu-064210	Mus musculus	91.89	0.00e+00	945.00
IUUC-Mpu-066292	Mustela putorius furo	91.51	0.00e+00	876.00
IUUC-Mlu-066952	Myotis lucifugus	92.09	0.00e+00	922.00
IUUC-Nle-069002	Nomascus leucogenys	91.08	0.00e+00	918.00
IUUC-Opr-070405	Ochotona princeps	82.96	0.00e+00	838.00
IUUC-Ont-071487	Oreochromis niloticus	89.05	0.00e+00	919.00
IUUC-Oan-073274	Ornithorhynchus anatinus	92.29	0.00e+00	947.00
IUUC-Ocu-074788	Oryctolagus cuniculus	91.48	0.00e+00	920.00
IUUC-Ola-086339	Oryzias latipes	88.46	0.00e+00	910.00
IUUC-Oga-089037	Otolemur garnettii	91.08	0.00e+00	915.00
IUUC-Oar-089458	Ovis aries	91.86	0.00e+00	898.00
IUUC-Pan-092120	Papio anubis	90.34	0.00e+00	905.00
IUUC-Psi-093157	Pelodiscus sinensis	90.24	0.00e+00	930.00
IUUC-Pfo-096904	Poecilia formosa	88.44	0.00e+00	913.00
IUUC-Pab-098358	Pongo abelii	91.08	0.00e+00	918.00
IUUC-Pva-102674	Pteropus vampyrus	91.26	0.00e+00	915.00
IUUC-Rno-105352	Rattus norvegicus	91.48	0.00e+00	942.00
IUUC-Sha-106532	Sarcophilus harrisii	75.61	2.00e-12	64.30
IUUC-Sar-113483	Sorex araneus	95.13	2.00e-127	449.00
IUUC-Ssc-116170	Sus scrofa	91.89	0.00e+00	921.00
IUUC-Tgu-116968	Taeniopygia guttata	91.48	0.00e+00	941.00
IUUC-Tru-118246	Takifugu rubripes	88.24	0.00e+00	911.00
IUUC-Tni-120692	Tetraodon nigroviridis	87.83	0.00e+00	909.00
IUUC-Ttr-128956	Tursiops truncatus	92.09	0.00e+00	921.00
IUUC-Vpa-130291	Vicugna pacos	93.58	0.00e+00	886.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence