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Tag Content
iUUCD ID IUUC-Aly-005883
Ensembl Protein ID fgenesh2_kg.6__1736__AT5G17370.1
UniProt Accession D7LWZ9; D7LWZ9_ARALL
Genbank Protein ID EFH50083.1
Protein Name WD-40 repeat family protein
Genbank Nucleotide ID GL348718
Gene Name ARALYDRAFT_488602
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__1736__AT5G17370.1 fgenesh2_kg.6__1736__AT5G17370.1 fgenesh2_kg.6__1736__AT5G17370.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.20e-08 34.8 389 427
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvl 35
           gH +s t ++f   ++ ++l sG+dD+  ++W++++g l
   Q: 389  GHVNSHTRIEFgidPSeRFLMSGGDDCYTRIWSIKSGQL 427
           677888889999996669***************999865 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
EQREQSRLRH NMKPELPGFY YDEEKNRYFP IKGPIPGAKS SSSSRTKQKP DPKPEQETNY 60
QKRTKIKALK LVYSRELNGN VIPVNKKMSN FKDEIQKTQA SYPVVWRYGS TEDIGDTALK 120
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Protein Fasta Sequence


>IUUC-Aly-005883|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAACAGAGAG AACAGAGTCG ACTCCGACAC AACATGAAGC CAGGTCTTTG AATCTTCTTC 60
CTCGACGATT CTTCTATTTT CAATGGCGTA TCTGAGATTT TGATGTGGGA TTTTGTTTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005883|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
KEGG aly:ARALYDRAFT_488602
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001176 Aegilops tauschii 39.00 1.00e-33 135.00
IUUC-Aml-001929 Ailuropoda melanoleuca 30.57 4.00e-12 65.50
IUUC-Atr-002556 Amborella trichopoda 37.48 2.00e-82 299.00
IUUC-Apl-003177 Anas platyrhynchos 28.57 2.00e-13 69.30
IUUC-Aca-004610 Anolis carolinensis 31.43 5.00e-14 72.00
IUUC-Ath-006668 Arabidopsis thaliana 77.74 0.00e+00 809.00
IUUC-Aor-010226 Aspergillus oryzae 59.09 4.00e-03 35.00
IUUC-Ame-010690 Astyanax mexicanus 24.84 6.00e-16 78.20
IUUC-Bta-012668 Bos taurus 31.85 9.00e-15 74.30
IUUC-Bdi-014848 Brachypodium distachyon 34.94 7.00e-60 224.00
IUUC-Bol-016035 Brassica oleracea 68.12 6.00e-180 622.00
IUUC-Bra-016687 Brassica rapa 69.59 4.00e-179 620.00
IUUC-Cja-019560 Callithrix jacchus 34.48 5.00e-09 53.10
IUUC-Cfa-020441 Canis familiaris 30.57 3.00e-12 65.90
IUUC-Cpo-021299 Cavia porcellus 30.23 1.00e-12 67.00
IUUC-Csa-023185 Chlorocebus sabaeus 23.06 9.00e-17 80.90
IUUC-Cho-024353 Choloepus hoffmanni 30.41 9.00e-13 67.80
IUUC-Dno-029890 Dasypus novemcinctus 30.99 5.00e-14 72.00
IUUC-Eca-033466 Equus caballus 23.15 1.00e-15 77.40
IUUC-Eeu-034995 Erinaceus europaeus 31.21 7.00e-13 67.40
IUUC-Fca-036199 Felis catus 30.57 3.00e-12 65.90
IUUC-Fal-036717 Ficedula albicollis 28.57 6.00e-13 68.20
IUUC-Gmo-039201 Gadus morhua 24.08 1.00e-17 83.60
IUUC-Gga-040398 Gallus gallus 29.14 2.00e-13 69.70
IUUC-Gac-042391 Gasterosteus aculeatus 26.39 2.00e-22 100.00
IUUC-Gma-043880 Glycine max 42.75 2.00e-98 352.00
IUUC-Ggo-045348 Gorilla gorilla 23.29 2.00e-17 82.80
IUUC-Hsa-046746 Homo sapiens 23.29 4.00e-17 82.00
IUUC-Hvu-047825 Hordeum vulgare 32.20 2.00e-50 192.00
IUUC-Itr-048472 Ictidomys tridecemlineatus 23.97 2.00e-13 70.10
IUUC-Lch-050272 Latimeria chalumnae 24.03 1.00e-14 74.30
IUUC-Lpe-051618 Leersia perrieri 33.53 2.00e-62 233.00
IUUC-Loc-051772 Lepisosteus oculatus 24.35 1.00e-17 84.00
IUUC-Laf-054577 Loxodonta africana 27.60 1.00e-11 63.90
IUUC-Mcc-055284 Macaca mulatta 26.86 7.00e-13 67.80
IUUC-Mtr-058472 Medicago truncatula 41.22 9.00e-88 317.00
IUUC-Mga-059238 Meleagris gallopavo 29.71 5.00e-14 71.60
IUUC-Mmr-061642 Microcebus murinus 29.82 7.00e-12 64.30
IUUC-Mdo-062030 Monodelphis domestica 30.86 5.00e-12 65.50
IUUC-Mmu-063420 Mus musculus 25.28 5.00e-16 78.60
IUUC-Mac-065231 Musa acuminata 39.00 4.00e-85 308.00
IUUC-Mpu-065692 Mustela putorius furo 30.57 4.00e-12 65.50
IUUC-Mlu-067428 Myotis lucifugus 24.28 5.00e-16 78.20
IUUC-Nle-070145 Nomascus leucogenys 23.06 1.00e-16 80.50
IUUC-Opr-071081 Ochotona princeps 29.94 1.00e-11 63.50
IUUC-Ont-071302 Oreochromis niloticus 25.00 4.00e-19 88.60
IUUC-Ocu-073925 Oryctolagus cuniculus 24.22 1.00e-14 73.90
IUUC-Oba-075797 Oryza barthii 33.20 3.00e-59 221.00
IUUC-Obr-076014 Oryza brachyantha 32.94 2.00e-62 233.00
IUUC-Ogl-077201 Oryza glaberrima 35.86 6.00e-59 220.00
IUUC-Ogu-078056 Oryza glumaepatula 33.20 2.00e-59 223.00
IUUC-Oin-080062 Oryza indica 35.48 4.00e-64 238.00
IUUC-Olo-080869 Oryza longistaminata 33.93 2.00e-54 207.00
IUUC-Ome-081820 Oryza meridionalis 34.25 1.00e-65 243.00
IUUC-Oni-082497 Oryza nivara 35.48 3.00e-61 228.00
IUUC-Opu-083780 Oryza punctata 35.00 1.00e-25 111.00
IUUC-Oru-085091 Oryza rufipogon 33.20 3.00e-62 231.00
IUUC-Osa-085725 Oryza sativa 33.20 3.00e-62 231.00
IUUC-Ola-087033 Oryzias latipes 25.70 3.00e-17 82.40
IUUC-Oga-088861 Otolemur garnettii 24.09 4.00e-16 78.60
IUUC-Oar-090048 Ovis aries 31.85 7.00e-14 71.20
IUUC-Ptr-091658 Pan troglodytes 23.29 3.00e-17 82.40
IUUC-Pan-092873 Papio anubis 22.83 6.00e-14 71.60
IUUC-Psi-093421 Pelodiscus sinensis 29.14 9.00e-14 70.90
IUUC-Pma-094216 Petromyzon marinus 22.72 3.00e-12 65.90
IUUC-Ppa-095186 Physcomitrella patens 28.24 2.00e-50 193.00
IUUC-Pfo-096178 Poecilia formosa 29.95 2.00e-12 66.60
IUUC-Pab-098037 Pongo abelii 31.22 2.00e-10 59.30
IUUC-Pop-099334 Populus trichocarpa 48.88 9.00e-54 202.00
IUUC-Pca-100845 Procavia capensis 28.07 1.00e-11 63.90
IUUC-Pva-103203 Pteropus vampyrus 23.44 2.00e-16 79.70
IUUC-Rno-105675 Rattus norvegicus 31.98 3.00e-13 69.30
IUUC-Sha-107389 Sarcophilus harrisii 28.66 5.00e-11 62.00
IUUC-Sja-107847 Schizosaccharomyces japonicus 20.00 7.00e-07 47.80
IUUC-Spo-108190 Schizosaccharomyces pombe 24.31 2.00e-08 53.10
IUUC-Sit-110421 Setaria italica 34.87 6.00e-53 200.00
IUUC-Sly-110888 Solanum lycopersicum 38.66 1.00e-79 290.00
IUUC-Sar-113185 Sorex araneus 63.64 1.70e-02 33.50
IUUC-Sbi-114182 Sorghum bicolor 40.89 7.00e-31 125.00
IUUC-Ssc-116005 Sus scrofa 25.28 2.00e-16 79.70
IUUC-Tgu-117023 Taeniopygia guttata 27.43 3.00e-10 58.90
IUUC-Tru-118221 Takifugu rubripes 26.67 1.00e-18 87.00
IUUC-Tsy-118784 Tarsius syrichta 29.82 1.00e-10 60.10
IUUC-Tni-120072 Tetraodon nigroviridis 25.11 2.00e-18 86.30
IUUC-Tca-121267 Theobroma cacao 42.55 5.00e-100 357.00
IUUC-Tae-124867 Triticum aestivum 34.74 8.00e-61 227.00
IUUC-Tur-126655 Triticum urartu 39.37 6.00e-40 157.00
IUUC-Tbe-127243 Tupaia belangeri 27.08 1.00e-09 57.40
IUUC-Ttr-129237 Tursiops truncatus 31.85 9.00e-14 70.90
IUUC-Vvi-131184 Vitis vinifera 45.24 2.00e-113 402.00
IUUC-Xtr-132006 Xenopus tropicalis 26.54 2.00e-12 66.20
Created Date 25-Jun-2017

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