iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-06	28.1	609	653
E3 activity/RING/RING	7.90e-09	36.0	610	648

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           lCpI  + ++ P+vl++G+ +  ++++ w+++ ++ cP++r+++++
   Q: 609  LCPICHDAFNTPTVLECGHIFCDECVQTWFKREQT-CPMCRAKVSD 653
           7****************************999998.*****99876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ f + p vl CgH+f+ +C+q w       ++e++CP Cr
   Q: 610  CPICHDAFNT-PTVLECGHIFCDECVQTW------FKREQTCPMCR 648
           ********99.888***************......**********8 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MNNSPKDPYR GGGGGSGPQD GAGSTGVSIN IESDDNDSTT AEHDYLLPAS SSSVTSGGGV 60
GGGGVVSGGS TSTSVNLDHQ HVPTARSSSL SGGNVRHGNI LSTFLARQRS YTPASNSSSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAGACGTA TTGGTGTTCT ATGTGAAAAA AGGCCAGCTC CAAGCATTGG AGATTGGATG 60
TGGAACAATG AACAACAGCC CCAAGGATCC CTATCGTGGA GGAGGAGGAG GTTCTGGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

dme:Dmel_CG13605

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	32.39	7.00e-23	100.00
IUUC-Aml-002361	Ailuropoda melanoleuca	24.92	1.00e-32	133.00
IUUC-Apl-003413	Anas platyrhynchos	25.85	3.00e-33	135.00
IUUC-Aca-005181	Anolis carolinensis	28.00	1.00e-33	136.00
IUUC-Aly-005949	Arabidopsis lyrata	26.23	9.00e-27	113.00
IUUC-Ath-007582	Arabidopsis thaliana	26.23	6.00e-30	124.00
IUUC-Ago-007876	Ashbya gossypii	40.48	8.00e-09	54.30
IUUC-Ame-011821	Astyanax mexicanus	28.00	4.00e-37	148.00
IUUC-Bgr-012267	Blumeria graminis	42.00	2.00e-08	53.90
IUUC-Bta-012475	Bos taurus	24.92	6.00e-33	134.00
IUUC-Bci-013692	Botrytis cinerea	46.00	2.00e-09	56.60
IUUC-Bdi-014706	Brachypodium distachyon	33.83	9.00e-29	120.00
IUUC-Bol-015956	Brassica oleracea	25.30	5.00e-25	107.00
IUUC-Bra-016928	Brassica rapa	25.78	8.00e-27	114.00
IUUC-Cel-018190	Caenorhabditis elegans	31.44	1.00e-25	109.00
IUUC-Cja-019920	Callithrix jacchus	24.92	7.00e-33	134.00
IUUC-Cfa-020715	Canis familiaris	24.92	3.00e-32	132.00
IUUC-Cpo-021829	Cavia porcellus	24.77	1.00e-32	133.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	46.77	2.00e-16	79.30
IUUC-Csa-023156	Chlorocebus sabaeus	25.32	1.00e-31	130.00
IUUC-Cho-025100	Choloepus hoffmanni	25.24	5.00e-32	131.00
IUUC-Cme-027202	Cyanidioschyzon merolae	48.84	4.00e-09	55.50
IUUC-Dre-027857	Danio rerio	26.15	4.00e-34	138.00
IUUC-Dno-030046	Dasypus novemcinctus	24.92	1.00e-32	133.00
IUUC-Dor-030446	Dipodomys ordii	40.28	4.00e-15	75.10
IUUC-Dse-031284	Dothistroma septosporum	36.73	1.00e-09	56.20
IUUC-Ete-032456	Echinops telfairi	28.28	1.00e-25	109.00
IUUC-Eca-033852	Equus caballus	25.85	2.00e-33	135.00
IUUC-Eeu-034649	Erinaceus europaeus	50.00	1.00e-10	60.50
IUUC-Fca-036281	Felis catus	24.92	2.00e-32	132.00
IUUC-Fal-037647	Ficedula albicollis	25.54	8.00e-32	129.00
IUUC-Gmo-038501	Gadus morhua	30.81	6.00e-25	107.00
IUUC-Ggr-039921	Gaeumannomyces graminis	35.09	1.00e-08	54.70
IUUC-Gga-040867	Gallus gallus	26.18	6.00e-33	134.00
IUUC-Gac-042530	Gasterosteus aculeatus	30.35	1.00e-25	109.00
IUUC-Gma-044109	Glycine max	32.64	5.00e-26	111.00
IUUC-Ggo-045577	Gorilla gorilla	28.97	6.00e-28	117.00
IUUC-Hsa-046314	Homo sapiens	24.62	2.00e-32	132.00
IUUC-Hvu-047080	Hordeum vulgare	33.33	6.00e-27	113.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	28.97	3.00e-27	115.00
IUUC-Lch-049516	Latimeria chalumnae	27.95	3.00e-31	128.00
IUUC-Lpe-051163	Leersia perrieri	27.47	2.00e-29	122.00
IUUC-Loc-052692	Lepisosteus oculatus	33.33	1.00e-30	126.00
IUUC-Laf-053448	Loxodonta africana	25.23	1.00e-32	133.00
IUUC-Mcc-054949	Macaca mulatta	24.92	3.00e-32	131.00
IUUC-Meu-056056	Macropus eugenii	31.66	1.00e-27	116.00
IUUC-Mpo-057601	Magnaporthe poae	33.33	1.00e-08	54.30
IUUC-Mtr-057979	Medicago truncatula	26.35	2.00e-30	125.00
IUUC-Mla-059052	Melampsora laricipopulina	42.55	6.00e-10	56.60
IUUC-Mga-059843	Meleagris gallopavo	26.18	7.00e-33	134.00
IUUC-Mmr-061235	Microcebus murinus	25.23	3.00e-33	135.00
IUUC-Mdo-062268	Monodelphis domestica	25.38	3.00e-33	135.00
IUUC-Mmu-063985	Mus musculus	25.69	1.00e-34	139.00
IUUC-Mac-065493	Musa acuminata	26.20	3.00e-31	128.00
IUUC-Mpu-066469	Mustela putorius furo	24.62	2.00e-32	132.00
IUUC-Mlu-067707	Myotis lucifugus	25.23	2.00e-32	132.00
IUUC-Nle-069009	Nomascus leucogenys	28.66	6.00e-30	124.00
IUUC-Ont-072228	Oreochromis niloticus	26.15	1.00e-33	136.00
IUUC-Oan-073490	Ornithorhynchus anatinus	30.43	3.00e-31	128.00
IUUC-Ocu-074346	Oryctolagus cuniculus	28.35	2.00e-27	115.00
IUUC-Oba-075245	Oryza barthii	32.82	9.00e-27	112.00
IUUC-Obr-076737	Oryza brachyantha	40.68	1.00e-22	99.00
IUUC-Ogl-077684	Oryza glaberrima	27.47	7.00e-29	120.00
IUUC-Ogu-078859	Oryza glumaepatula	27.03	7.00e-29	120.00
IUUC-Oin-079424	Oryza indica	27.47	1.00e-28	119.00
IUUC-Ome-081614	Oryza meridionalis	40.68	1.00e-22	100.00
IUUC-Oni-082296	Oryza nivara	27.16	3.00e-23	102.00
IUUC-Opu-083546	Oryza punctata	40.68	1.00e-22	99.80
IUUC-Oru-085138	Oryza rufipogon	26.56	2.00e-25	109.00
IUUC-Osa-085729	Oryza sativa	27.47	8.00e-29	120.00
IUUC-Ola-086621	Oryzias latipes	31.72	1.00e-31	130.00
IUUC-Olu-087799	Ostreococcus lucimarinus	30.52	2.00e-15	74.30
IUUC-Oga-087950	Otolemur garnettii	26.48	5.00e-27	114.00
IUUC-Oar-089816	Ovis aries	26.88	1.00e-27	117.00
IUUC-Ptr-091587	Pan troglodytes	24.92	1.00e-32	133.00
IUUC-Pan-092883	Papio anubis	24.92	3.00e-32	131.00
IUUC-Psi-093826	Pelodiscus sinensis	25.00	1.00e-32	133.00
IUUC-Pno-094878	Phaeosphaeria nodorum	36.59	7.00e-11	59.30
IUUC-Ppa-095990	Physcomitrella patens	33.33	1.00e-20	93.60
IUUC-Pfo-097090	Poecilia formosa	30.20	2.00e-27	115.00
IUUC-Pab-098474	Pongo abelii	28.04	2.00e-27	116.00
IUUC-Pop-100001	Populus trichocarpa	33.16	2.00e-27	115.00
IUUC-Pca-100148	Procavia capensis	24.92	3.00e-32	132.00
IUUC-Ppe-101974	Prunus persica	27.27	5.00e-28	117.00
IUUC-Pva-102165	Pteropus vampyrus	24.92	4.00e-32	131.00
IUUC-Rno-105220	Rattus norvegicus	25.38	7.00e-34	137.00
IUUC-Sha-107537	Sarcophilus harrisii	28.17	6.00e-29	120.00
IUUC-Sja-107948	Schizosaccharomyces japonicus	40.35	1.00e-09	57.00
IUUC-Spo-108335	Schizosaccharomyces pombe	42.55	3.00e-10	58.90
IUUC-Smo-109495	Selaginella moellendorffii	25.93	1.00e-25	109.00
IUUC-Sit-110120	Setaria italica	26.73	8.00e-27	114.00
IUUC-Sly-111389	Solanum lycopersicum	28.16	5.00e-27	114.00
IUUC-Stu-112700	Solanum tuberosum	28.48	5.00e-27	114.00
IUUC-Sar-113494	Sorex araneus	43.06	1.00e-15	76.60
IUUC-Sbi-114415	Sorghum bicolor	37.01	9.00e-25	106.00
IUUC-Ssc-115358	Sus scrofa	24.31	3.00e-32	132.00
IUUC-Tgu-117409	Taeniopygia guttata	31.22	5.00e-26	110.00
IUUC-Tru-117949	Takifugu rubripes	26.77	3.00e-34	138.00
IUUC-Tsy-118995	Tarsius syrichta	31.16	7.00e-25	107.00
IUUC-Tni-120361	Tetraodon nigroviridis	33.84	4.00e-28	118.00
IUUC-Tca-121155	Theobroma cacao	33.85	2.00e-29	122.00
IUUC-Tae-124483	Triticum aestivum	27.08	2.00e-30	125.00
IUUC-Tur-126177	Triticum urartu	32.83	8.00e-27	113.00
IUUC-Tme-126916	Tuber melanosporum	42.19	1.00e-09	57.80
IUUC-Ttr-128557	Tursiops truncatus	24.31	4.00e-32	131.00
IUUC-Vpa-130045	Vicugna pacos	40.00	6.00e-15	74.30
IUUC-Vvi-131323	Vitis vinifera	27.65	4.00e-26	111.00
IUUC-Xtr-132785	Xenopus tropicalis	24.54	3.00e-29	122.00
IUUC-Xma-134146	Xiphophorus maculatus	30.20	5.00e-28	117.00
IUUC-Yli-134581	Yarrowia lipolytica	41.18	3.00e-10	58.50
IUUC-Zma-135198	Zea mays	26.73	2.00e-27	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence