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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006639
Ensembl Protein ID AT3G18860.1
UniProt Accession Q9LHN3; Q9LHN3_ARATH
Genbank Protein ID AAK95297.1; AEE76160.1; BAB03095.1
Protein Name AT3g18860/MCB22_3; Transducin family protein / WD-40 repeat family protein
Genbank Nucleotide ID AF410311; CP002686; AP002039
Gene Name At3g18860
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G18860 AT3G18860.2 AT3G18860.2
AT3G18860 AT3G18860.1 AT3G18860.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.10e-32 109.7 18 48
UBD/Beta-Prp 6.80e-46 157.7 13 216
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH d+v++++  +d  ++++s+D ti+vW+l
   Q: 18   GHDDDVRGICVcNDENIATSSRDRTIRVWSL 48
           8*********9999889************97 PP
   

   UBD/Beta-Prp
   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdls.....tgkcvhtlkghedsvlslsfsp.....sgdklvsGshdrtirvwdletgqcleet 132
             +l gh++ v+ ++  +d+  ++t+s+Drti+vw+l+     +++   +l gh++ v  l++ p        +lvsGs d  + vw+l +g+ ++ t
   Q: 13   RCELHGHDDDVRGICVCNDE-NIATSSRDRTIRVWSLDpsdkrKYTSEKILLGHTSFVGPLAWIPptdeyPEGRLVSGSMDTFVFVWNLMNGENIQ-T 108
           55789**************9.6*************66655766777778899*************987644489**********************.* PP
   S: 133  lsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           l+gh+  v++v+++     +vs+s D+t++ W  ++g+l++ +   h+++++ ++  ++g elvsgs d ++klw  +t+  ++tl ghtd+v+ +++
   Q: 109  LKGHQMQVTGVAIDN--EDIVSSSVDQTLKRW--RNGQLVESWDA-HQSPIQAVIRLPSG-ELVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAV 198
           **************9..77*************..99*******98.*********99976.9***************999..9*************** PP
   S: 231  spnderlvsgssDgsiriW 249
              d  ++s+s+Dgsir+W
   Q: 199  M-PDLGFLSASHDGSIRLW 216
           *.677788*********** PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MVMDIDFNEY KLRCELHGHD DDVRGICVCN DENIATSSRD RTIRVWSLDP SDKRKYTSEK 60
ILLGHTSFVG PLAWIPPTDE YPEGRLVSGS MDTFVFVWNL MNGENIQTLK GHQMQVTGVA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006639|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATTAGTTTT TCTCCTGCAG AGTGTTTCTC CTTCCTCAAG TCACTTTTTG AGTCGCAGCA 60
ATTTGGCGTT TGGTATCTCT CAATCTGCTG CTTCTCCTTC TCAGTCATGG TCATGGATAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006639|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0009506--C:plasmodesma
KEGG ath:AT3G18860
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000146 Aegilops tauschii 59.21 0.00e+00 888.00
IUUC-Aml-002125 Ailuropoda melanoleuca 32.75 7.00e-112 397.00
IUUC-Atr-002554 Amborella trichopoda 63.07 0.00e+00 941.00
IUUC-Apl-004094 Anas platyrhynchos 32.19 8.00e-103 367.00
IUUC-Aca-004726 Anolis carolinensis 33.17 2.00e-108 385.00
IUUC-Aly-005961 Arabidopsis lyrata 97.23 0.00e+00 1453.00
IUUC-Ago-007772 Ashbya gossypii 29.33 5.00e-73 268.00
IUUC-Acl-008316 Aspergillus clavatus 30.19 3.00e-75 276.00
IUUC-Afl-008532 Aspergillus flavus 31.06 3.00e-90 325.00
IUUC-Afu-008950 Aspergillus fumigatus 30.54 9.00e-87 314.00
IUUC-Ani-009186 Aspergillus nidulans 31.57 1.00e-90 327.00
IUUC-Ang-009575 Aspergillus niger 30.11 5.00e-83 301.00
IUUC-Aor-010086 Aspergillus oryzae 31.06 3.00e-90 325.00
IUUC-Ate-010541 Aspergillus terreus 29.85 6.00e-84 304.00
IUUC-Ame-011633 Astyanax mexicanus 32.37 7.00e-110 390.00
IUUC-Bgr-012292 Blumeria graminis 29.49 1.00e-79 290.00
IUUC-Bta-013218 Bos taurus 32.54 2.00e-113 402.00
IUUC-Bci-013876 Botrytis cinerea 30.53 1.00e-84 306.00
IUUC-Bdi-014810 Brachypodium distachyon 62.10 0.00e+00 955.00
IUUC-Bol-016006 Brassica oleracea 89.46 0.00e+00 1347.00
IUUC-Bra-017593 Brassica rapa 89.72 0.00e+00 1357.00
IUUC-Cel-018703 Caenorhabditis elegans 23.46 2.00e-32 134.00
IUUC-Cja-019270 Callithrix jacchus 32.46 6.00e-113 400.00
IUUC-Cfa-021262 Canis familiaris 32.63 2.00e-112 399.00
IUUC-Cpo-021449 Cavia porcellus 31.23 4.00e-100 358.00
IUUC-Csa-024140 Chlorocebus sabaeus 32.58 2.00e-113 402.00
IUUC-Cho-024923 Choloepus hoffmanni 36.21 2.00e-39 157.00
IUUC-Cin-025373 Ciona intestinalis 29.97 1.00e-91 330.00
IUUC-Csv-026324 Ciona savignyi 30.34 7.00e-87 314.00
IUUC-Cgl-026711 Colletotrichum gloeosporioides 26.39 8.00e-69 254.00
IUUC-Cne-026998 Cryptococcus neoformans 28.69 6.00e-50 191.00
IUUC-Cme-027154 Cyanidioschyzon merolae 29.48 3.00e-58 219.00
IUUC-Dre-028674 Danio rerio 32.21 7.00e-110 390.00
IUUC-Dno-028966 Dasypus novemcinctus 32.25 1.00e-112 400.00
IUUC-Dor-030343 Dipodomys ordii 29.24 3.00e-55 209.00
IUUC-Dse-031385 Dothistroma septosporum 29.08 1.00e-77 283.00
IUUC-Dme-032044 Drosophila melanogaster 28.20 1.00e-82 300.00
IUUC-Ete-032506 Echinops telfairi 28.57 3.00e-51 196.00
IUUC-Eca-033547 Equus caballus 32.75 1.00e-113 403.00
IUUC-Eeu-034462 Erinaceus europaeus 37.50 9.00e-41 161.00
IUUC-Fca-035893 Felis catus 32.62 1.00e-111 397.00
IUUC-Fal-037235 Ficedula albicollis 32.33 4.00e-110 391.00
IUUC-Fox-037836 Fusarium oxysporum 28.29 1.00e-83 303.00
IUUC-Fso-038251 Fusarium solani 28.50 1.00e-81 296.00
IUUC-Gmo-038648 Gadus morhua 33.69 4.00e-101 361.00
IUUC-Ggr-039867 Gaeumannomyces graminis 28.61 8.00e-81 294.00
IUUC-Gga-040989 Gallus gallus 33.50 3.00e-114 405.00
IUUC-Gac-041344 Gasterosteus aculeatus 31.87 5.00e-97 348.00
IUUC-Gma-043067 Glycine max 71.64 0.00e+00 1118.00
IUUC-Ggo-045009 Gorilla gorilla 34.38 6.00e-94 337.00
IUUC-Hsa-046807 Homo sapiens 32.71 6.00e-113 401.00
IUUC-Itr-048636 Ictidomys tridecemlineatus 32.67 5.00e-114 404.00
IUUC-Kpa-049134 Komagataella pastoris 27.62 4.00e-69 255.00
IUUC-Lch-049597 Latimeria chalumnae 33.90 6.00e-72 264.00
IUUC-Lpe-050821 Leersia perrieri 59.15 0.00e+00 940.00
IUUC-Loc-051849 Lepisosteus oculatus 31.87 4.00e-105 375.00
IUUC-Lma-053297 Leptosphaeria maculans 30.60 4.00e-84 305.00
IUUC-Laf-053495 Loxodonta africana 32.21 1.00e-111 396.00
IUUC-Meu-055983 Macropus eugenii 29.03 8.00e-37 148.00
IUUC-Mor-057006 Magnaporthe oryzae 28.48 7.00e-74 271.00
IUUC-Mpo-057465 Magnaporthe poae 28.04 1.00e-77 283.00
IUUC-Mtr-058374 Medicago truncatula 69.87 0.00e+00 1136.00
IUUC-Mla-058895 Melampsora laricipopulina 33.26 1.00e-59 223.00
IUUC-Mvi-060297 Microbotryum violaceum 31.13 1.00e-87 317.00
IUUC-Mmr-060810 Microcebus murinus 31.09 1.00e-101 363.00
IUUC-Mdo-062671 Monodelphis domestica 32.67 3.00e-113 402.00
IUUC-Mmu-063536 Mus musculus 32.08 5.00e-110 391.00
IUUC-Mac-064902 Musa acuminata 63.49 0.00e+00 1001.00
IUUC-Mpu-066085 Mustela putorius furo 32.88 8.00e-113 400.00
IUUC-Mlu-067907 Myotis lucifugus 35.45 5.00e-87 314.00
IUUC-Nfi-068457 Neosartorya fischeri 28.49 1.00e-64 240.00
IUUC-Ncr-068622 Neurospora crassa 30.45 6.00e-85 308.00
IUUC-Nle-069049 Nomascus leucogenys 32.21 1.00e-108 386.00
IUUC-Opr-071013 Ochotona princeps 34.09 5.00e-24 105.00
IUUC-Ont-071339 Oreochromis niloticus 33.42 2.00e-107 382.00
IUUC-Oan-073353 Ornithorhynchus anatinus 39.47 3.00e-42 164.00
IUUC-Ocu-074625 Oryctolagus cuniculus 32.92 4.00e-115 408.00
IUUC-Oba-075226 Oryza barthii 56.23 0.00e+00 859.00
IUUC-Obr-076875 Oryza brachyantha 60.88 0.00e+00 984.00
IUUC-Ogl-077057 Oryza glaberrima 61.67 0.00e+00 986.00
IUUC-Ogu-078156 Oryza glumaepatula 61.80 0.00e+00 987.00
IUUC-Oin-079373 Oryza indica 61.67 0.00e+00 984.00
IUUC-Olo-080849 Oryza longistaminata 54.01 0.00e+00 702.00
IUUC-Ome-081654 Oryza meridionalis 56.23 0.00e+00 859.00
IUUC-Oni-082221 Oryza nivara 57.03 0.00e+00 875.00
IUUC-Opu-084103 Oryza punctata 57.03 0.00e+00 850.00
IUUC-Oru-084751 Oryza rufipogon 56.10 0.00e+00 856.00
IUUC-Osa-085584 Oryza sativa 61.67 0.00e+00 983.00
IUUC-Ola-086974 Oryzias latipes 30.98 6.00e-105 374.00
IUUC-Oga-088052 Otolemur garnettii 30.06 2.00e-98 353.00
IUUC-Oar-089509 Ovis aries 32.43 2.00e-111 396.00
IUUC-Ptr-090911 Pan troglodytes 32.71 7.00e-113 400.00
IUUC-Pan-092141 Papio anubis 32.30 9.00e-112 397.00
IUUC-Psi-093543 Pelodiscus sinensis 32.75 5.00e-98 351.00
IUUC-Pno-094952 Phaeosphaeria nodorum 29.95 6.00e-84 304.00
IUUC-Ppa-095881 Physcomitrella patens 53.34 0.00e+00 828.00
IUUC-Pfo-096739 Poecilia formosa 30.11 7.00e-98 351.00
IUUC-Pab-098641 Pongo abelii 32.47 6.00e-113 401.00
IUUC-Pop-099493 Populus trichocarpa 70.26 0.00e+00 1114.00
IUUC-Pca-100599 Procavia capensis 29.61 6.00e-89 321.00
IUUC-Ppe-101874 Prunus persica 72.69 0.00e+00 1159.00
IUUC-Pva-103009 Pteropus vampyrus 31.28 4.00e-88 318.00
IUUC-Pgr-103260 Puccinia graminis 31.12 2.00e-77 283.00
IUUC-Ptt-103711 Puccinia triticina 28.09 5.00e-67 248.00
IUUC-Pte-104337 Pyrenophora teres 31.15 4.00e-83 301.00
IUUC-Pyt-104475 Pyrenophora triticirepentis 30.90 6.00e-82 298.00
IUUC-Rno-105273 Rattus norvegicus 32.00 4.00e-111 395.00
IUUC-Sce-106351 Saccharomyces cerevisiae 30.07 4.00e-64 238.00
IUUC-Sha-106758 Sarcophilus harrisii 32.08 1.00e-107 383.00
IUUC-Sja-107687 Schizosaccharomyces japonicus 27.31 5.00e-81 295.00
IUUC-Spo-108093 Schizosaccharomyces pombe 30.59 8.00e-93 333.00
IUUC-Ssl-108623 Sclerotinia sclerotiorum 29.83 7.00e-80 291.00
IUUC-Smo-109368 Selaginella moellendorffii 50.33 0.00e+00 758.00
IUUC-Sit-109699 Setaria italica 63.21 0.00e+00 1002.00
IUUC-Sly-111063 Solanum lycopersicum 69.13 0.00e+00 1050.00
IUUC-Sar-113199 Sorex araneus 37.93 1.00e-72 267.00
IUUC-Sbi-114745 Sorghum bicolor 60.90 0.00e+00 964.00
IUUC-Sre-115080 Sporisorium reilianum 34.73 9.00e-77 281.00
IUUC-Ssc-115666 Sus scrofa 32.34 1.00e-112 399.00
IUUC-Tgu-116877 Taeniopygia guttata 32.00 8.00e-109 387.00
IUUC-Tru-117580 Takifugu rubripes 31.27 3.00e-104 372.00
IUUC-Tsy-118946 Tarsius syrichta 32.14 3.00e-103 369.00
IUUC-Tni-119755 Tetraodon nigroviridis 31.31 3.00e-102 365.00
IUUC-Tca-120977 Theobroma cacao 70.63 0.00e+00 1122.00
IUUC-Tre-122217 Trichoderma reesei 29.96 2.00e-84 306.00
IUUC-Tvi-122671 Trichoderma virens 28.12 6.00e-81 295.00
IUUC-Tae-125581 Triticum aestivum 61.84 0.00e+00 985.00
IUUC-Tur-126404 Triticum urartu 41.76 7.00e-77 281.00
IUUC-Tme-126971 Tuber melanosporum 32.64 2.00e-109 389.00
IUUC-Ttr-128173 Tursiops truncatus 33.00 1.00e-113 403.00
IUUC-Uma-129322 Ustilago maydis 28.05 2.00e-82 299.00
IUUC-Vda-129682 Verticillium dahliae 28.32 6.00e-76 278.00
IUUC-Vpa-130607 Vicugna pacos 32.10 4.00e-105 375.00
IUUC-Vvi-131153 Vitis vinifera 70.05 0.00e+00 1109.00
IUUC-Xtr-132208 Xenopus tropicalis 31.93 5.00e-108 384.00
IUUC-Xma-133098 Xiphophorus maculatus 30.35 2.00e-95 342.00
IUUC-Yli-134646 Yarrowia lipolytica 33.12 1.00e-71 263.00
IUUC-Zma-135920 Zea mays 57.62 0.00e+00 940.00
Created Date 25-Jun-2017

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