iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013153

UUCD1 version

UUC-BoT-00912

Ensembl Protein ID

ENSBTAP00000025393.2

UniProt Accession

Q5EA56; Q5EA56_BOVIN

Genbank Protein ID

AAX08730.1; DAA15571.1

Protein Name

Ring finger and WD repeat domain 1 isoform 1; TNF receptor-associated factor 7

Genbank Nucleotide ID

DAAA02057310; GJ062847

Gene Name

TRAF7; BOS_22466

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000019073.2	ENSBTAT00000025393.2	ENSBTAP00000025393.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-32	108.3	393	424
UBD/Beta-Prp	2.10e-48	165.1	391	669

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++v+cl+  s  +ll sGs D+tikvWD+
   Q: 393  GHQGPVWCLCVySMgDLLFSGSSDKTIKVWDT 424
           8*********778889***************6 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdv.ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
           + gh+   + c+++   ++ll++gs d+tikvwd+ tt k+ ++l+gh++ v a++++     l +gs D ti vwd+++ + v t+++
   Q: 391  FVGHQGP-VWCLCVYSMGDLLFSGSSDKTIKVWDTcTTYKCQKTLEGHDGIVLALCIQGC--KLYSGSADCTIIVWDIQNLQKVNTIRA 476
           5556655.5559999*******************846678899***************99..6************************** PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght 180
           h++ v++l +s   + l sGs  + i+vwd+  t+ +l++ l+g +++v+ +v  +   +l sGs+ +t+++Wd++t ++++ l+    
   Q: 477  HDNPVCTLVSSH--NMLFSGS-LKAIKVWDIvGTELKLKKELTGLNHWVRALVAAQ--TYLYSGSY-QTIKIWDIRTLDCIHVLQT-SG 558
           *******99999..9******.9*******7368888888**************99..9******9.79***************99.** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlhnssv 267
           +svys++++    ++v g + + + +wd++++e vrtl+gh  +v+ +++   p+++ + s+s D+s+r+W +++  +++tl +h+ sv
   Q: 559  GSVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVIstPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSV 645
           *********9..8***********************************99888************************************ PP
   S: 268  isvavlsfgdnvlvlgsedskvniwkl 294
           ++ av   ++  l++g+ ds+v++w +
   Q: 646  TALAV---SRGRLFSGAVDSTVKVWTC 669
           ****9...*****************86 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MSSGKGARYN RFSGGPSNLP TPDTAGTRME TTFGPAFSAV TTITKADGTS TYKQHRRTPS 60
SSSSLAYSPR DEEDSMPPIS TPRRSDSAIS VRSLHSESSM SLRSTFSLPE EEEEPEPLVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGGGACGC CGCCCGAGGA GCCTGGATGC CGCTCTAGAG CATGAGCTCG GGCAAGGGCG 60
CCCGCTACAA CCGCTTCTCC GGGGGGCCGA GCAACCTTCC CACCCCAGAC ACGGCCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0675--Receptor
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR020472--G-protein_beta_WD-40_rep
IPR008974--TRAF-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0005886--C:plasma membrane
GO:0000151--C:ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000185--P:activation of MAPKKK activity
GO:0006915--P:apoptotic process
GO:2001235--P:positive regulation of apoptotic signaling pathway
GO:0016567--P:protein ubiquitination

KEGG

bta:511692

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001971	Ailuropoda melanoleuca	97.03	0.00e+00	1247.00
IUUC-Apl-004098	Anas platyrhynchos	94.85	0.00e+00	1199.00
IUUC-Aca-004852	Anolis carolinensis	88.16	0.00e+00	972.00
IUUC-Ame-011275	Astyanax mexicanus	82.52	0.00e+00	932.00
IUUC-Cja-019243	Callithrix jacchus	96.48	0.00e+00	1221.00
IUUC-Cfa-020036	Canis familiaris	98.51	0.00e+00	1285.00
IUUC-Cpo-022194	Cavia porcellus	97.30	0.00e+00	1264.00
IUUC-Csa-023363	Chlorocebus sabaeus	98.21	0.00e+00	1279.00
IUUC-Cin-025279	Ciona intestinalis	58.98	0.00e+00	796.00
IUUC-Csv-026163	Ciona savignyi	64.55	0.00e+00	772.00
IUUC-Dre-027998	Danio rerio	90.17	0.00e+00	1108.00
IUUC-Dno-029356	Dasypus novemcinctus	95.54	1.00e-130	458.00
IUUC-Dor-030750	Dipodomys ordii	95.67	0.00e+00	1229.00
IUUC-Eca-033671	Equus caballus	82.49	0.00e+00	982.00
IUUC-Eeu-034765	Erinaceus europaeus	97.37	1.00e-165	576.00
IUUC-Fca-035843	Felis catus	98.21	0.00e+00	1281.00
IUUC-Fal-037237	Ficedula albicollis	93.28	0.00e+00	1233.00
IUUC-Gmo-038779	Gadus morhua	81.37	0.00e+00	1004.00
IUUC-Gga-040579	Gallus gallus	92.99	0.00e+00	1227.00
IUUC-Gac-042233	Gasterosteus aculeatus	85.67	0.00e+00	1112.00
IUUC-Gma-042914	Glycine max	26.45	7.00e-19	88.20
IUUC-Ggo-045147	Gorilla gorilla	97.91	0.00e+00	1276.00
IUUC-Hsa-046117	Homo sapiens	97.76	0.00e+00	1274.00
IUUC-Itr-048899	Ictidomys tridecemlineatus	98.06	0.00e+00	1281.00
IUUC-Lch-050593	Latimeria chalumnae	90.76	0.00e+00	1180.00
IUUC-Loc-052444	Lepisosteus oculatus	90.67	0.00e+00	1216.00
IUUC-Laf-053499	Loxodonta africana	90.98	0.00e+00	1169.00
IUUC-Mcc-055038	Macaca mulatta	98.36	0.00e+00	1281.00
IUUC-Meu-056610	Macropus eugenii	95.41	0.00e+00	940.00
IUUC-Mtr-057641	Medicago truncatula	27.73	3.00e-19	89.70
IUUC-Mga-060183	Meleagris gallopavo	92.56	0.00e+00	1221.00
IUUC-Mmr-061133	Microcebus murinus	96.30	0.00e+00	1206.00
IUUC-Mdo-062312	Monodelphis domestica	96.13	0.00e+00	1256.00
IUUC-Mmu-063844	Mus musculus	96.86	0.00e+00	1238.00
IUUC-Mpu-066552	Mustela putorius furo	97.61	0.00e+00	1251.00
IUUC-Mlu-067719	Myotis lucifugus	97.46	0.00e+00	1242.00
IUUC-Nle-070045	Nomascus leucogenys	97.92	0.00e+00	1189.00
IUUC-Opr-070927	Ochotona princeps	94.63	0.00e+00	1214.00
IUUC-Ont-072680	Oreochromis niloticus	85.73	0.00e+00	1137.00
IUUC-Oan-073521	Ornithorhynchus anatinus	94.00	3.00e-52	195.00
IUUC-Ogu-077987	Oryza glumaepatula	25.86	3.00e-19	89.70
IUUC-Oru-085210	Oryza rufipogon	25.60	2.00e-19	90.10
IUUC-Ola-087454	Oryzias latipes	89.16	0.00e+00	1174.00
IUUC-Oga-088380	Otolemur garnettii	97.91	0.00e+00	1276.00
IUUC-Oar-089558	Ovis aries	81.49	0.00e+00	1028.00
IUUC-Ptr-091606	Pan troglodytes	97.91	0.00e+00	1276.00
IUUC-Pan-092227	Papio anubis	98.36	0.00e+00	1281.00
IUUC-Psi-093853	Pelodiscus sinensis	86.31	0.00e+00	1014.00
IUUC-Pma-094541	Petromyzon marinus	81.33	2.00e-154	537.00
IUUC-Pfo-096237	Poecilia formosa	88.70	0.00e+00	1129.00
IUUC-Pab-097589	Pongo abelii	98.06	0.00e+00	1277.00
IUUC-Pca-100375	Procavia capensis	94.44	0.00e+00	1181.00
IUUC-Pva-102434	Pteropus vampyrus	98.06	0.00e+00	1276.00
IUUC-Rno-105443	Rattus norvegicus	97.31	0.00e+00	1244.00
IUUC-Sha-106517	Sarcophilus harrisii	95.83	0.00e+00	1250.00
IUUC-Ssc-115990	Sus scrofa	97.61	0.00e+00	1276.00
IUUC-Tgu-117222	Taeniopygia guttata	93.10	0.00e+00	1223.00
IUUC-Tru-118392	Takifugu rubripes	88.43	0.00e+00	1137.00
IUUC-Tni-120220	Tetraodon nigroviridis	87.80	0.00e+00	1127.00
IUUC-Tca-121793	Theobroma cacao	27.11	1.00e-20	94.40
IUUC-Tur-126339	Triticum urartu	26.69	2.00e-17	84.00
IUUC-Tbe-128045	Tupaia belangeri	98.96	6.00e-161	560.00
IUUC-Ttr-128203	Tursiops truncatus	95.52	0.00e+00	1229.00
IUUC-Xtr-132043	Xenopus tropicalis	92.09	0.00e+00	1236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence