iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081194

Ensembl Protein ID

OMERI03G28260.1

UniProt Accession

A0A0E0D5J5; A0A0E0D5J5_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI03G28260	OMERI03G28260.1	OMERI03G28260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-40	135.7	82	118
UBD/Beta-Prp	5.50e-78	263.1	33	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW+++t+++l
   Q: 82   HDGPVRGVHFhaTQPLFVSGGDDYKIKVWNYKTHRCL 118
           99*********6449********************98 PP

UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           + t +++++++++ + f+p +++++++  +g i+ wd+++g+ll ++ +h+++v+ v f+ +++++v+g++D+ ikvw+++t  c+ tl+gh d
   Q: 33   MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLD 126
           567889999************************************************************************************* PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....................... 166
           ++++++f+ +  ++vs+s+d+tir+w++++++c+  +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+                       
   Q: 127  YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVA-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIgalrkktvspaddilrltqmntd 219
           ***********************************.*************************************************977777777 PP
   S: 167  ....ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
                 + + + l+g h++ v++ sf+++ + +vsg++d++vklw +  ++   v+tl+gh +nv++v f+ +++++vs s+D+siriWd +++
   Q: 220  lfggVDAVVKYVLEG-HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAweVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKR 312
           776444444444466.********************************777668**************************************** PP
   S: 255  dllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           + ++t+ +++++++  ++ +++ n l++g  ds   ++kl++++p
   Q: 313  TGIQTFRREHDRFWILSA-HPEMNLLAAG-HDSGMIVFKLERERP 355
           ******************.6666655555.689999999988765 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MLTKFETKSN RVKGLSFHPR RPWILASLHS XKMLTKFETK SNRVKGLSFH PRRPWILASL 60
HSGVIQMWDY RMGTLLDRFD EHDGPVRGVH FHATQPLFVS GGDDYKIKVW NYKTHRCLFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGACCA AGTTCGAGAC GAAGAGCAAC CGGGTGAAGG GGCTGAGCTT CCACCCGCGG 60
CGGCCATGGA TCCTGGCCAG CCTCCACAGC GNGAAGATGC TGACCAAGTT CGAGACGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0853--WD repeat

Interpro

IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011048--Haem_d1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005154	Anolis carolinensis	77.03	1.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence