iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Jab_MPN	5.90e-51	172.4	268	393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Jab_MPN

   S: 5    vvvlpkrllkkflelsdvkiavavevyGlllgelvkdkevktvvlvpkqlagvgsvqvenvedvfdlldqeGlivlGWiHthpeelkfl 93
            vvl++ l++kfl l+d+++ +++e++G+l+g+l ++++++t+v+vpkq+ag ++++venve++f ++dq+Gl +lGWiHthp++++fl
   Q: 268  CVVLSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFSVQDQHGLLTLGWIHTHPTQTAFL 356
           69*************************************************************************************** PP
   S: 94   ssvdvathsslealkkrsvaivsspkfqelsafkltd 130
           ssvd++th+s++ ++++ +aiv+spk +++++f+lt+
   Q: 357  SSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTN 393
           ***********************************96 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEQPFTVNSL KKLAAMPDHT DVSLSPEERV RALSKLGCNI SINEDITPRR YFRSGVEMER 60
MASVYLEEGN LENAFVLYNK FITLFVEKLP SHRDYQQCAV PEKQDIMKKL KEIAFPRTDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTGATGAA CATATTTCCA TTTTTTTATT CAGCTTGTGC AGAATGTTCT GAAGAAGACA 60
GGGAGAGTAA ACTCTAGCTG TTCTTTGGCT TCCTTAAGTA GCTTCATCTA GTTCTCAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000555--JAMM/MPN+_dom
IPR007330--MIT
IPR015063--USP8_dimer

Pfam

PF01398--JAB
PF08969--USP8_dimer

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016020--C:membrane

KEGG

rno:687696

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000506	Aegilops tauschii	49.70	1.00e-42	167.00
IUUC-Aml-001297	Ailuropoda melanoleuca	88.30	0.00e+00	770.00
IUUC-Apl-003560	Anas platyrhynchos	79.36	0.00e+00	694.00
IUUC-Aca-004523	Anolis carolinensis	81.01	0.00e+00	677.00
IUUC-Ath-007385	Arabidopsis thaliana	45.66	6.00e-43	168.00
IUUC-Ame-011650	Astyanax mexicanus	67.58	8.00e-160	556.00
IUUC-Bta-012468	Bos taurus	89.22	0.00e+00	817.00
IUUC-Bdi-014845	Brachypodium distachyon	49.41	2.00e-42	167.00
IUUC-Cja-019809	Callithrix jacchus	90.83	0.00e+00	795.00
IUUC-Cfa-020729	Canis familiaris	85.78	0.00e+00	750.00
IUUC-Cpo-022124	Cavia porcellus	90.83	0.00e+00	794.00
IUUC-Cre-022989	Chlamydomonas reinhardtii	47.78	5.00e-34	137.00
IUUC-Csa-023702	Chlorocebus sabaeus	86.77	0.00e+00	766.00
IUUC-Cho-024802	Choloepus hoffmanni	81.61	0.00e+00	695.00
IUUC-Dre-027852	Danio rerio	67.35	6.00e-165	573.00
IUUC-Dno-029491	Dasypus novemcinctus	91.23	0.00e+00	779.00
IUUC-Dor-030785	Dipodomys ordii	90.93	0.00e+00	744.00
IUUC-Dse-031153	Dothistroma septosporum	44.76	1.00e-37	151.00
IUUC-Ete-032842	Echinops telfairi	86.87	0.00e+00	764.00
IUUC-Eca-034082	Equus caballus	89.91	0.00e+00	826.00
IUUC-Eeu-034738	Erinaceus europaeus	75.94	3.00e-167	581.00
IUUC-Fca-036175	Felis catus	88.30	0.00e+00	771.00
IUUC-Fal-037252	Ficedula albicollis	80.05	0.00e+00	702.00
IUUC-Gga-041246	Gallus gallus	78.44	0.00e+00	690.00
IUUC-Gma-042650	Glycine max	44.19	7.00e-46	178.00
IUUC-Ggo-044665	Gorilla gorilla	82.50	0.00e+00	699.00
IUUC-Hsa-046463	Homo sapiens	90.83	0.00e+00	791.00
IUUC-Itr-047930	Ictidomys tridecemlineatus	91.74	0.00e+00	804.00
IUUC-Kpa-049381	Komagataella pastoris	30.51	2.00e-47	183.00
IUUC-Lch-049954	Latimeria chalumnae	78.94	0.00e+00	697.00
IUUC-Lpe-051096	Leersia perrieri	50.60	8.00e-43	168.00
IUUC-Loc-052178	Lepisosteus oculatus	70.68	1.00e-176	612.00
IUUC-Laf-053366	Loxodonta africana	90.60	0.00e+00	792.00
IUUC-Mcc-055560	Macaca mulatta	88.91	0.00e+00	763.00
IUUC-Mtr-057642	Medicago truncatula	47.40	1.00e-44	174.00
IUUC-Mga-059433	Meleagris gallopavo	78.67	0.00e+00	690.00
IUUC-Mmr-061327	Microcebus murinus	87.39	0.00e+00	753.00
IUUC-Mdo-062783	Monodelphis domestica	75.21	2.00e-147	514.00
IUUC-Mmu-064307	Mus musculus	97.48	0.00e+00	846.00
IUUC-Mac-065572	Musa acuminata	48.00	7.00e-44	171.00
IUUC-Mpu-066259	Mustela putorius furo	88.07	0.00e+00	771.00
IUUC-Mlu-067657	Myotis lucifugus	89.68	0.00e+00	787.00
IUUC-Nle-069180	Nomascus leucogenys	89.43	0.00e+00	769.00
IUUC-Opr-070830	Ochotona princeps	91.39	0.00e+00	764.00
IUUC-Ont-071929	Oreochromis niloticus	61.90	3.00e-146	511.00
IUUC-Oan-073314	Ornithorhynchus anatinus	77.49	3.00e-169	587.00
IUUC-Ocu-074386	Oryctolagus cuniculus	91.28	0.00e+00	799.00
IUUC-Oba-075358	Oryza barthii	50.60	2.00e-42	166.00
IUUC-Obr-076024	Oryza brachyantha	51.81	2.00e-43	169.00
IUUC-Ogl-077100	Oryza glaberrima	50.00	8.00e-42	164.00
IUUC-Ogu-078047	Oryza glumaepatula	50.60	1.00e-42	167.00
IUUC-Oin-079545	Oryza indica	50.60	1.00e-42	167.00
IUUC-Olo-080359	Oryza longistaminata	50.60	1.00e-42	167.00
IUUC-Ome-081619	Oryza meridionalis	50.60	1.00e-42	167.00
IUUC-Oni-082079	Oryza nivara	50.60	1.00e-42	167.00
IUUC-Opu-083914	Oryza punctata	49.70	9.00e-42	164.00
IUUC-Oru-085251	Oryza rufipogon	50.60	1.00e-42	167.00
IUUC-Osa-085426	Oryza sativa	50.60	1.00e-42	167.00
IUUC-Ola-087457	Oryzias latipes	72.66	1.00e-55	208.00
IUUC-Oga-088150	Otolemur garnettii	90.57	0.00e+00	761.00
IUUC-Oar-089824	Ovis aries	87.33	0.00e+00	806.00
IUUC-Ptr-090702	Pan troglodytes	90.60	0.00e+00	790.00
IUUC-Pan-091924	Papio anubis	90.83	0.00e+00	787.00
IUUC-Psi-093069	Pelodiscus sinensis	81.19	0.00e+00	678.00
IUUC-Pno-094896	Phaeosphaeria nodorum	51.35	8.00e-38	152.00
IUUC-Ppa-095540	Physcomitrella patens	45.56	8.00e-44	171.00
IUUC-Pab-098080	Pongo abelii	90.37	0.00e+00	792.00
IUUC-Pca-100352	Procavia capensis	91.15	0.00e+00	763.00
IUUC-Pte-104295	Pyrenophora teres	50.99	5.00e-39	155.00
IUUC-Sha-107154	Sarcophilus harrisii	83.94	0.00e+00	768.00
IUUC-Sja-107679	Schizosaccharomyces japonicus	33.11	3.00e-49	189.00
IUUC-Spo-108166	Schizosaccharomyces pombe	50.77	2.00e-44	172.00
IUUC-Smo-109437	Selaginella moellendorffii	48.84	7.00e-42	162.00
IUUC-Sit-110118	Setaria italica	45.02	1.00e-43	171.00
IUUC-Sly-111816	Solanum lycopersicum	47.40	2.00e-43	170.00
IUUC-Stu-112240	Solanum tuberosum	47.40	2.00e-43	170.00
IUUC-Sar-112924	Sorex araneus	89.71	0.00e+00	727.00
IUUC-Sbi-114439	Sorghum bicolor	44.44	2.00e-43	170.00
IUUC-Ssc-115372	Sus scrofa	90.83	0.00e+00	795.00
IUUC-Tsy-119100	Tarsius syrichta	85.55	7.00e-171	593.00
IUUC-Tae-124826	Triticum aestivum	50.00	6.00e-43	168.00
IUUC-Tur-126001	Triticum urartu	50.00	8.00e-43	168.00
IUUC-Tme-126874	Tuber melanosporum	53.38	3.00e-43	170.00
IUUC-Tbe-127977	Tupaia belangeri	89.91	3.00e-178	617.00
IUUC-Ttr-128291	Tursiops truncatus	90.62	0.00e+00	690.00
IUUC-Vpa-130821	Vicugna pacos	91.42	0.00e+00	749.00
IUUC-Vvi-131576	Vitis vinifera	44.80	1.00e-44	174.00
IUUC-Xma-133318	Xiphophorus maculatus	60.66	3.00e-148	518.00
IUUC-Yli-134641	Yarrowia lipolytica	48.57	7.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence