iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113789

Ensembl Protein ID

Sb08g004050.1

UniProt Accession

A0A1B6PBH4; A0A1B6PBH4_SORBI

Genbank Protein ID

KXG23036.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G047800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g004050	Sb08g004050.1	Sb08g004050.1
Sb08g004050	Sb08g004050.2	Sb08g004050.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-34	115.5	217	252
UBD/Beta-Prp	7.70e-46	157.4	213	383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+dsv++la  ++ tll+sG+  ++++vWD+rtg 
   Q: 217  GHKDSVYALAMnDTgTLLLSGGTEKVVRVWDPRTGS 252
           8**********7447******************996 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++ kgh+dsv++l+++ +g  l+sG+  +++rvwd +tg++    l+gh++ ++ + v+++g+++ sGs D+++rlWdl ++++++     htdsv
   Q: 213  IAAKGHKDSVYALAMNDTGTLLLSGGTEKVVRVWDPRTGSKNM-KLRGHTDNIRALLVDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAV-HTDSV 306
           5779**************************************9.9*******************************************98.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
             l+ +++  ++ sg++d++v l dl+t e v  ++  + +++++ +  +d++ v +  D s++ W  + +++ k++q+ 
   Q: 307  WALASTPSFGHVYSGGRDQSVYLTDLSTRESVLLCT-NEYPILQLSLQ-DDTIWVAT-TDSSVYGWPAEGRTPQKVFQKG 383
           ***************************998555554.56788888888.55555555.6*******99999999999985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MHRVGSAGNT AGSTRPRKEK RFTYVLNDAD DKKHCAGINC LAYLNGSTFS TSDYLFSGSR 60
DGTLKRWELN NGDASFSATF ESHVDWLFFI VQVNDAIIVG EKLVSCSSDT TIKVWNCFSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGTATAGG CTCGAGGCTC GACCCTTGGC CCGCCGCCAG AACTCGTCTC GCCCGCGGCC 60
GATCGTCTCC ATCCGCTCGC CGCGCCGCAA CCCGGAGAGG AGACTGCGCT CGGTCGAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001160	Aegilops tauschii	91.31	0.00e+00	974.00
IUUC-Aml-001533	Ailuropoda melanoleuca	34.77	6.00e-108	384.00
IUUC-Atr-003009	Amborella trichopoda	71.56	0.00e+00	1136.00
IUUC-Apl-003709	Anas platyrhynchos	40.56	4.00e-66	243.00
IUUC-Aca-004875	Anolis carolinensis	34.93	2.00e-110	392.00
IUUC-Aly-005464	Arabidopsis lyrata	65.13	0.00e+00	967.00
IUUC-Ath-006969	Arabidopsis thaliana	66.15	0.00e+00	960.00
IUUC-Acl-008203	Aspergillus clavatus	30.62	3.00e-56	213.00
IUUC-Afl-008571	Aspergillus flavus	28.95	1.00e-54	207.00
IUUC-Afu-009072	Aspergillus fumigatus	31.05	1.00e-34	141.00
IUUC-Ani-009413	Aspergillus nidulans	29.93	2.00e-55	210.00
IUUC-Ang-009571	Aspergillus niger	30.58	4.00e-57	216.00
IUUC-Aor-010064	Aspergillus oryzae	28.95	9.00e-55	208.00
IUUC-Ate-010463	Aspergillus terreus	30.29	1.00e-54	207.00
IUUC-Ame-010875	Astyanax mexicanus	40.14	3.00e-85	308.00
IUUC-Bgr-012288	Blumeria graminis	28.82	1.00e-56	213.00
IUUC-Bta-013379	Bos taurus	34.77	1.00e-107	383.00
IUUC-Bci-013859	Botrytis cinerea	29.26	1.00e-60	227.00
IUUC-Bdi-014645	Brachypodium distachyon	87.76	0.00e+00	1364.00
IUUC-Bol-015551	Brassica oleracea	64.52	0.00e+00	956.00
IUUC-Bra-017253	Brassica rapa	64.00	0.00e+00	944.00
IUUC-Cel-018656	Caenorhabditis elegans	29.15	1.00e-80	293.00
IUUC-Cja-018804	Callithrix jacchus	34.69	3.00e-107	381.00
IUUC-Cfa-020076	Canis familiaris	34.77	7.00e-108	383.00
IUUC-Cpo-021721	Cavia porcellus	34.75	2.00e-105	375.00
IUUC-Cre-022779	Chlamydomonas reinhardtii	38.36	8.00e-54	205.00
IUUC-Csa-023188	Chlorocebus sabaeus	34.77	7.00e-108	383.00
IUUC-Cho-024932	Choloepus hoffmanni	34.12	2.00e-103	369.00
IUUC-Cin-025591	Ciona intestinalis	31.46	7.00e-96	343.00
IUUC-Cgl-026540	Colletotrichum gloeosporioides	35.61	2.00e-20	94.40
IUUC-Cne-026819	Cryptococcus neoformans	28.32	6.00e-27	115.00
IUUC-Cme-027188	Cyanidioschyzon merolae	30.98	3.00e-68	252.00
IUUC-Dre-028370	Danio rerio	33.86	6.00e-111	394.00
IUUC-Dno-029960	Dasypus novemcinctus	34.77	9.00e-107	380.00
IUUC-Dor-030933	Dipodomys ordii	39.76	2.00e-76	278.00
IUUC-Dse-031532	Dothistroma septosporum	32.55	8.00e-38	151.00
IUUC-Dme-032168	Drosophila melanogaster	29.52	2.00e-80	292.00
IUUC-Ete-033107	Echinops telfairi	33.69	1.00e-97	350.00
IUUC-Eca-034028	Equus caballus	34.64	2.00e-107	382.00
IUUC-Eeu-034894	Erinaceus europaeus	38.26	4.00e-86	311.00
IUUC-Fca-035619	Felis catus	38.98	4.00e-93	334.00
IUUC-Fal-036869	Ficedula albicollis	34.69	2.00e-108	385.00
IUUC-Fox-037907	Fusarium oxysporum	31.46	2.00e-40	160.00
IUUC-Fso-038101	Fusarium solani	28.97	2.00e-54	207.00
IUUC-Gmo-038627	Gadus morhua	34.07	1.00e-108	386.00
IUUC-Ggr-039995	Gaeumannomyces graminis	29.25	1.00e-34	141.00
IUUC-Gga-040555	Gallus gallus	34.63	1.00e-109	389.00
IUUC-Gac-042497	Gasterosteus aculeatus	34.02	3.00e-108	385.00
IUUC-Gma-043327	Glycine max	69.91	0.00e+00	1060.00
IUUC-Ggo-045561	Gorilla gorilla	34.77	7.00e-108	383.00
IUUC-Hsa-045710	Homo sapiens	34.77	7.00e-108	383.00
IUUC-Hvu-047730	Hordeum vulgare	90.07	0.00e+00	992.00
IUUC-Itr-049030	Ictidomys tridecemlineatus	34.88	7.00e-73	266.00
IUUC-Kpa-049237	Komagataella pastoris	25.07	3.00e-23	103.00
IUUC-Lch-049507	Latimeria chalumnae	34.36	2.00e-107	382.00
IUUC-Lpe-051608	Leersia perrieri	85.26	0.00e+00	1323.00
IUUC-Loc-052373	Lepisosteus oculatus	33.25	1.00e-99	356.00
IUUC-Lma-053025	Leptosphaeria maculans	29.45	1.00e-56	214.00
IUUC-Laf-053706	Loxodonta africana	34.79	5.00e-107	380.00
IUUC-Mcc-055046	Macaca mulatta	34.77	7.00e-108	383.00
IUUC-Meu-056840	Macropus eugenii	35.11	1.00e-32	133.00
IUUC-Mor-057284	Magnaporthe oryzae	28.78	1.00e-52	200.00
IUUC-Mpo-057418	Magnaporthe poae	29.32	2.00e-33	137.00
IUUC-Mtr-058384	Medicago truncatula	68.22	0.00e+00	1011.00
IUUC-Mla-059101	Melampsora laricipopulina	33.76	2.00e-35	144.00
IUUC-Mga-059297	Meleagris gallopavo	34.63	1.00e-109	389.00
IUUC-Mvi-060419	Microbotryum violaceum	32.13	4.00e-31	129.00
IUUC-Mmr-061196	Microcebus murinus	37.00	9.00e-89	320.00
IUUC-Mdo-062762	Monodelphis domestica	34.84	1.00e-108	386.00
IUUC-Mmu-063915	Mus musculus	34.99	3.00e-110	391.00
IUUC-Mac-065434	Musa acuminata	70.91	0.00e+00	1125.00
IUUC-Mpu-065999	Mustela putorius furo	38.73	1.00e-88	318.00
IUUC-Mlu-068226	Myotis lucifugus	34.77	7.00e-108	383.00
IUUC-Nfi-068416	Neosartorya fischeri	30.65	1.00e-54	207.00
IUUC-Ncr-068825	Neurospora crassa	28.89	5.00e-58	218.00
IUUC-Nle-069416	Nomascus leucogenys	34.77	7.00e-108	383.00
IUUC-Opr-070515	Ochotona princeps	33.07	6.00e-96	344.00
IUUC-Ont-072052	Oreochromis niloticus	33.16	6.00e-103	367.00
IUUC-Oan-073636	Ornithorhynchus anatinus	34.56	7.00e-108	384.00
IUUC-Ocu-074799	Oryctolagus cuniculus	34.77	8.00e-108	383.00
IUUC-Oba-075146	Oryza barthii	85.53	0.00e+00	1323.00
IUUC-Obr-076699	Oryza brachyantha	85.28	0.00e+00	1329.00
IUUC-Ogl-077883	Oryza glaberrima	86.50	0.00e+00	880.00
IUUC-Ogu-078114	Oryza glumaepatula	78.50	0.00e+00	1180.00
IUUC-Oin-079575	Oryza indica	86.32	0.00e+00	1346.00
IUUC-Olo-080531	Oryza longistaminata	80.90	0.00e+00	1258.00
IUUC-Ome-081368	Oryza meridionalis	79.74	0.00e+00	1202.00
IUUC-Oni-082457	Oryza nivara	85.53	0.00e+00	1325.00
IUUC-Opu-084050	Oryza punctata	85.53	0.00e+00	1312.00
IUUC-Oru-084330	Oryza rufipogon	85.39	0.00e+00	1323.00
IUUC-Osa-085408	Oryza sativa	86.32	0.00e+00	1346.00
IUUC-Ola-087546	Oryzias latipes	33.84	1.00e-107	382.00
IUUC-Olu-087710	Ostreococcus lucimarinus	31.00	6.00e-91	327.00
IUUC-Oga-087998	Otolemur garnettii	34.82	5.00e-107	381.00
IUUC-Oar-090303	Ovis aries	34.77	1.00e-107	383.00
IUUC-Ptr-090588	Pan troglodytes	34.77	7.00e-108	383.00
IUUC-Pan-092722	Papio anubis	34.77	7.00e-108	383.00
IUUC-Psi-093911	Pelodiscus sinensis	34.27	4.00e-109	388.00
IUUC-Pma-094580	Petromyzon marinus	35.14	5.00e-111	394.00
IUUC-Pno-095085	Phaeosphaeria nodorum	30.54	2.00e-56	213.00
IUUC-Ppa-095594	Physcomitrella patens	62.79	0.00e+00	931.00
IUUC-Pfo-096994	Poecilia formosa	33.67	3.00e-106	378.00
IUUC-Pab-097586	Pongo abelii	34.77	1.00e-107	383.00
IUUC-Pop-099389	Populus trichocarpa	70.57	0.00e+00	1094.00
IUUC-Pca-100458	Procavia capensis	36.61	4.00e-34	139.00
IUUC-Ppe-102060	Prunus persica	72.93	0.00e+00	1117.00
IUUC-Pva-102698	Pteropus vampyrus	38.98	3.00e-93	335.00
IUUC-Pgr-103649	Puccinia graminis	29.13	6.00e-31	129.00
IUUC-Ptt-103910	Puccinia triticina	30.29	6.00e-34	139.00
IUUC-Pte-104181	Pyrenophora teres	29.86	6.00e-54	205.00
IUUC-Pyt-104439	Pyrenophora triticirepentis	29.76	4.00e-54	206.00
IUUC-Rno-104978	Rattus norvegicus	34.97	1.00e-108	386.00
IUUC-Sha-107079	Sarcophilus harrisii	34.14	2.00e-99	355.00
IUUC-Sja-107716	Schizosaccharomyces japonicus	29.97	2.00e-62	233.00
IUUC-Spo-108325	Schizosaccharomyces pombe	28.70	8.00e-49	188.00
IUUC-Ssl-108542	Sclerotinia sclerotiorum	30.53	4.00e-39	155.00
IUUC-Smo-109427	Selaginella moellendorffii	59.95	0.00e+00	901.00
IUUC-Sit-110755	Setaria italica	94.74	0.00e+00	1401.00
IUUC-Sly-111099	Solanum lycopersicum	68.18	0.00e+00	959.00
IUUC-Sar-113408	Sorex araneus	38.27	7.00e-77	280.00
IUUC-Sre-114998	Sporisorium reilianum	36.39	1.00e-39	157.00
IUUC-Ssc-115434	Sus scrofa	34.77	7.00e-108	383.00
IUUC-Tgu-116517	Taeniopygia guttata	34.80	6.00e-110	390.00
IUUC-Tru-118174	Takifugu rubripes	33.89	1.00e-107	383.00
IUUC-Tsy-118935	Tarsius syrichta	34.77	2.00e-108	385.00
IUUC-Tni-119744	Tetraodon nigroviridis	33.63	4.00e-105	374.00
IUUC-Tca-121360	Theobroma cacao	72.08	0.00e+00	1124.00
IUUC-Tre-122198	Trichoderma reesei	30.75	7.00e-39	155.00
IUUC-Tvi-122389	Trichoderma virens	31.09	1.00e-38	154.00
IUUC-Tae-125576	Triticum aestivum	88.29	0.00e+00	1372.00
IUUC-Tur-126699	Triticum urartu	86.93	0.00e+00	1360.00
IUUC-Tme-126932	Tuber melanosporum	32.61	1.00e-41	164.00
IUUC-Tbe-127267	Tupaia belangeri	42.02	4.00e-50	192.00
IUUC-Ttr-129153	Tursiops truncatus	34.90	8.00e-110	390.00
IUUC-Uma-129604	Ustilago maydis	32.87	1.00e-38	155.00
IUUC-Vda-129925	Verticillium dahliae	32.03	9.00e-40	158.00
IUUC-Vpa-130553	Vicugna pacos	38.19	4.00e-89	321.00
IUUC-Vvi-130995	Vitis vinifera	72.97	0.00e+00	1109.00
IUUC-Xtr-132346	Xenopus tropicalis	34.51	1.00e-108	386.00
IUUC-Xma-133654	Xiphophorus maculatus	39.20	3.00e-63	234.00
IUUC-Yli-134451	Yarrowia lipolytica	26.07	5.00e-21	95.50
IUUC-Zma-135647	Zea mays	95.39	0.00e+00	1434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence