iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058687

Ensembl Protein ID

AET02671

UniProt Accession

G7L7T0; G7L7T0_MEDTR

Genbank Protein ID

AET02671.1

Protein Name

Retinoblastoma-binding-like protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g045440

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g045440	KEH19267	KEH19267
MTR_8g045440	AET02671	AET02671

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-16	61.2	68	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           +++t++++  + +++++++ D+++ +WD+ +g+
   Q: 68   SPITSICWsKGgNRILASAADKSLSLWDVLSGK 100
           79******944699**************98886 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNNSIIDPLQ GDFPEVIEEY LEHGIMKCIA FNRRGTLLAA GCNDGSCVIW DFEVRGVAKE 60
LRDNECCSPI TSICWSKGGN RILASAADKS LSLWDVLSGK RIKRIVLQQT PLLARLNPGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTTTTTGGA CTGTTTGTCT CACTCTCACA ATTTCGCTTT CCCTCTCTCA CTCTCCTTTG 60
CAACTTCGAG CTTCTCTTGA AACGATGAAC AACTCCATTA TCGGTTAGTT TTTCTCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_8g045440

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002118	Ailuropoda melanoleuca	37.39	1.00e-60	227.00
IUUC-Acl-008105	Aspergillus clavatus	33.55	7.00e-50	191.00
IUUC-Afl-008633	Aspergillus flavus	34.81	2.00e-49	189.00
IUUC-Afu-009075	Aspergillus fumigatus	31.77	9.00e-29	120.00
IUUC-Ani-009233	Aspergillus nidulans	33.41	2.00e-52	199.00
IUUC-Ang-009695	Aspergillus niger	34.92	2.00e-51	195.00
IUUC-Aor-009988	Aspergillus oryzae	34.81	2.00e-49	189.00
IUUC-Ate-010313	Aspergillus terreus	34.48	5.00e-49	187.00
IUUC-Bgr-012302	Blumeria graminis	32.76	2.00e-42	165.00
IUUC-Bci-013968	Botrytis cinerea	33.10	1.00e-46	180.00
IUUC-Cel-018610	Caenorhabditis elegans	30.53	5.00e-49	187.00
IUUC-Cja-019938	Callithrix jacchus	37.39	2.00e-60	226.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	35.74	2.00e-33	136.00
IUUC-Cin-025285	Ciona intestinalis	34.38	9.00e-62	230.00
IUUC-Csv-026366	Ciona savignyi	33.85	3.00e-60	225.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	31.00	5.00e-44	171.00
IUUC-Cme-027137	Cyanidioschyzon merolae	27.01	7.00e-32	131.00
IUUC-Fca-035370	Felis catus	37.39	1.00e-60	227.00
IUUC-Ggr-040063	Gaeumannomyces graminis	30.21	2.00e-46	179.00
IUUC-Lch-049495	Latimeria chalumnae	39.23	5.00e-30	124.00
IUUC-Lpe-051038	Leersia perrieri	58.91	5.00e-169	587.00
IUUC-Mpo-057622	Magnaporthe poae	30.44	5.00e-47	181.00
IUUC-Mla-059057	Melampsora laricipopulina	30.08	2.00e-39	156.00
IUUC-Mac-065292	Musa acuminata	65.47	0.00e+00	710.00
IUUC-Nfi-068429	Neosartorya fischeri	34.42	1.00e-50	193.00
IUUC-Oba-075664	Oryza barthii	58.91	1.00e-174	605.00
IUUC-Obr-076630	Oryza brachyantha	59.82	4.00e-171	593.00
IUUC-Ogl-077847	Oryza glaberrima	58.52	4.00e-174	603.00
IUUC-Ogu-077970	Oryza glumaepatula	58.12	7.00e-162	563.00
IUUC-Oin-079374	Oryza indica	58.91	2.00e-174	604.00
IUUC-Olo-080992	Oryza longistaminata	58.91	4.00e-174	603.00
IUUC-Ome-081683	Oryza meridionalis	57.88	8.00e-168	582.00
IUUC-Oni-082594	Oryza nivara	58.91	2.00e-174	604.00
IUUC-Opu-083907	Oryza punctata	58.76	1.00e-177	615.00
IUUC-Oru-084400	Oryza rufipogon	58.91	2.00e-174	605.00
IUUC-Osa-085442	Oryza sativa	58.91	2.00e-174	605.00
IUUC-Oar-090358	Ovis aries	37.16	2.00e-60	226.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	32.79	1.00e-46	180.00
IUUC-Sit-110687	Setaria italica	56.94	8.00e-166	576.00
IUUC-Sar-113284	Sorex araneus	32.95	5.00e-43	168.00
IUUC-Sbi-114362	Sorghum bicolor	57.65	2.00e-164	572.00
IUUC-Ssc-115604	Sus scrofa	37.39	1.00e-60	226.00
IUUC-Uma-129654	Ustilago maydis	33.33	1.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence