iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116071

Ensembl Protein ID

ENSSSCP00000008483.2

UniProt Accession

F1RK53; F1RK53_PIG

Genbank Protein ID

ENSSSCP00000008483

Protein Name

Coronin

Genbank Nucleotide ID

FP475964

Gene Name

LOC100513346

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007944.2	ENSSSCT00000008707.2	ENSSSCP00000008483.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-30	103.7	590	626

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgv 34
           gHt+++++l+f      + l+s+s+D ti++WDl  gv
   Q: 590  GHTEKIYSLRFhplaA-DVLASSSYDLTIRIWDLQAGV 626
           8**********97542.68**************98886 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MNRFKVSKFR HTEARPPRRE AWISDIRAGT APSCGNHIKS SCSLIAFISD RPGVLGIVPL 60
EGQGEDKRHV THLGCHSDLV TDLDFSPFDD FLLATASADR TVKLWRLPAP GQALPSGPGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGCGAGC GTCTGGCTGC GGGTGGGGCC GGAGCGGCGG GAGTCGCGGC TGCTTGCAGT 60
GCACCTGAGA GCCTACGCCC GAGTCCTCGA AGCTGCGCCC GCCGCGGTCC TAGCAGCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027331--CORO7
IPR015505--Coronin
IPR003143--Cyt_cd1_C
IPR015048--DUF1899
IPR023302--Pept_S9A_N
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0016021--C:integral component of membrane
GO:0007015--P:actin filament organization
GO:0016477--P:cell migration
GO:0030010--P:establishment of cell polarity
GO:0007030--P:Golgi organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002235	Ailuropoda melanoleuca	88.10	0.00e+00	1389.00
IUUC-Apl-004126	Anas platyrhynchos	59.21	1.00e-114	406.00
IUUC-Aca-005201	Anolis carolinensis	67.66	0.00e+00	804.00
IUUC-Ame-011310	Astyanax mexicanus	65.75	1.00e-72	265.00
IUUC-Bta-012843	Bos taurus	88.52	0.00e+00	1451.00
IUUC-Cel-018204	Caenorhabditis elegans	36.61	1.00e-72	268.00
IUUC-Cja-019024	Callithrix jacchus	85.19	0.00e+00	1335.00
IUUC-Cfa-020626	Canis familiaris	88.30	0.00e+00	1410.00
IUUC-Cpo-022429	Cavia porcellus	85.68	0.00e+00	1466.00
IUUC-Csa-023919	Chlorocebus sabaeus	87.55	0.00e+00	1428.00
IUUC-Cin-025202	Ciona intestinalis	46.71	6.00e-126	444.00
IUUC-Csv-026236	Ciona savignyi	41.22	3.00e-143	501.00
IUUC-Dre-028759	Danio rerio	69.64	0.00e+00	662.00
IUUC-Dno-029234	Dasypus novemcinctus	73.74	0.00e+00	1028.00
IUUC-Dor-030242	Dipodomys ordii	88.08	0.00e+00	1444.00
IUUC-Dme-032156	Drosophila melanogaster	45.04	1.00e-124	441.00
IUUC-Ete-032862	Echinops telfairi	83.49	0.00e+00	1245.00
IUUC-Eca-033902	Equus caballus	87.62	0.00e+00	1394.00
IUUC-Eeu-034540	Erinaceus europaeus	65.18	0.00e+00	645.00
IUUC-Fca-036335	Felis catus	89.93	0.00e+00	1463.00
IUUC-Fal-037278	Ficedula albicollis	74.10	0.00e+00	700.00
IUUC-Gmo-038846	Gadus morhua	67.54	0.00e+00	629.00
IUUC-Gga-041144	Gallus gallus	61.64	0.00e+00	1050.00
IUUC-Gac-041680	Gasterosteus aculeatus	54.20	0.00e+00	974.00
IUUC-Ggo-045469	Gorilla gorilla	83.41	0.00e+00	650.00
IUUC-Hsa-046873	Homo sapiens	87.66	0.00e+00	1411.00
IUUC-Itr-048351	Ictidomys tridecemlineatus	86.77	0.00e+00	1433.00
IUUC-Loc-052682	Lepisosteus oculatus	64.19	0.00e+00	906.00
IUUC-Laf-053869	Loxodonta africana	75.06	0.00e+00	1009.00
IUUC-Mcc-054896	Macaca mulatta	87.66	0.00e+00	1446.00
IUUC-Meu-056428	Macropus eugenii	75.62	0.00e+00	1313.00
IUUC-Mga-059389	Meleagris gallopavo	66.30	0.00e+00	1134.00
IUUC-Mvi-060231	Microbotryum violaceum	34.09	2.00e-58	221.00
IUUC-Mmr-060935	Microcebus murinus	86.61	0.00e+00	1447.00
IUUC-Mdo-062707	Monodelphis domestica	75.57	0.00e+00	1347.00
IUUC-Mmu-063976	Mus musculus	82.23	0.00e+00	1447.00
IUUC-Mpu-066441	Mustela putorius furo	88.47	0.00e+00	1367.00
IUUC-Mlu-067524	Myotis lucifugus	89.71	0.00e+00	1487.00
IUUC-Opr-071099	Ochotona princeps	84.32	0.00e+00	1256.00
IUUC-Ont-071673	Oreochromis niloticus	56.22	0.00e+00	1012.00
IUUC-Oan-072860	Ornithorhynchus anatinus	72.43	0.00e+00	830.00
IUUC-Ocu-074794	Oryctolagus cuniculus	86.34	0.00e+00	1371.00
IUUC-Ola-086479	Oryzias latipes	54.88	0.00e+00	1036.00
IUUC-Oga-088030	Otolemur garnettii	83.95	0.00e+00	1293.00
IUUC-Oar-090379	Ovis aries	76.26	0.00e+00	1219.00
IUUC-Ptr-091006	Pan troglodytes	83.78	0.00e+00	1301.00
IUUC-Pan-092428	Papio anubis	87.57	0.00e+00	1441.00
IUUC-Psi-093624	Pelodiscus sinensis	56.45	9.00e-118	416.00
IUUC-Pfo-096558	Poecilia formosa	56.82	0.00e+00	1050.00
IUUC-Pab-098298	Pongo abelii	77.38	0.00e+00	1170.00
IUUC-Pca-100305	Procavia capensis	79.71	0.00e+00	947.00
IUUC-Pva-102702	Pteropus vampyrus	87.24	0.00e+00	1177.00
IUUC-Rno-105934	Rattus norvegicus	77.38	0.00e+00	1399.00
IUUC-Sha-106795	Sarcophilus harrisii	78.85	0.00e+00	723.00
IUUC-Sar-112987	Sorex araneus	85.66	2.00e-113	403.00
IUUC-Tgu-116813	Taeniopygia guttata	67.24	9.00e-179	619.00
IUUC-Tru-118359	Takifugu rubripes	55.64	0.00e+00	1042.00
IUUC-Tni-119997	Tetraodon nigroviridis	59.94	0.00e+00	811.00
IUUC-Ttr-129020	Tursiops truncatus	88.41	0.00e+00	1484.00
IUUC-Xtr-132552	Xenopus tropicalis	62.57	1.00e-126	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence