iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000012634.7	ENSRNOT00000093087.1	ENSRNOP00000076069.1
ENSRNOG00000012634.7	ENSRNOT00000016875.6	ENSRNOP00000016875.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	92.89	0.00e+00	1726.00	IUUC-Hsa-045742

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MWSPPFGTSS STWPCCESVT METGGLPLEL WRVILAYLHL PDLGRCSLVC RAWYELILSL 60
DSTRWRQLCL GCTECRHPNW PNQPDVEPES WREAFKQHYL ASKTWAKNAL DLESSICFSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAGTGGAG CCTGGTTGAG TTCCGGGTGC AAGGCGGCCG CTGGAGCAGA GCAAGCTGCC 60
GCTCTCGCAA GCTTTGGAGG CAGAGCTGCA ATGTTCCGGA TCGAAGGTCT CGCGCCGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006633--Carb-bd_sugar_hydrolysis-dom
IPR001810--F-box_dom
IPR007742--NosD_dom
IPR022441--Para_beta_helix_rpt-2
IPR006626--PbH1
IPR012334--Pectin_lyas_fold
IPR011050--Pectin_lyase_fold/virulence

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like
PF05048--NosD

SMART

SM00722--CASH
SM00256--FBOX
SM00710--PbH1

Gene Ontology

GO:0005737--C:cytoplasm
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0042981--P:regulation of apoptotic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001558	Ailuropoda melanoleuca	93.10	0.00e+00	1709.00
IUUC-Aca-004917	Anolis carolinensis	64.32	0.00e+00	1229.00
IUUC-Ame-011129	Astyanax mexicanus	51.27	0.00e+00	952.00
IUUC-Bta-012928	Bos taurus	87.50	0.00e+00	1605.00
IUUC-Cja-019383	Callithrix jacchus	91.45	0.00e+00	1148.00
IUUC-Cfa-020855	Canis familiaris	90.59	0.00e+00	1675.00
IUUC-Cpo-021873	Cavia porcellus	89.66	0.00e+00	1667.00
IUUC-Cre-022959	Chlamydomonas reinhardtii	24.53	2.20e-02	33.90
IUUC-Csa-024199	Chlorocebus sabaeus	91.63	0.00e+00	1728.00
IUUC-Dre-028495	Danio rerio	55.67	3.00e-171	595.00
IUUC-Dno-029707	Dasypus novemcinctus	90.48	0.00e+00	1714.00
IUUC-Dor-030668	Dipodomys ordii	87.47	0.00e+00	1653.00
IUUC-Ete-032489	Echinops telfairi	78.07	0.00e+00	904.00
IUUC-Eca-033534	Equus caballus	90.90	0.00e+00	1714.00
IUUC-Eeu-034536	Erinaceus europaeus	77.27	2.00e-156	546.00
IUUC-Fca-035906	Felis catus	92.89	0.00e+00	1706.00
IUUC-Gmo-039471	Gadus morhua	45.75	2.00e-135	476.00
IUUC-Ggr-039829	Gaeumannomyces graminis	42.50	1.20e-02	35.80
IUUC-Gac-041496	Gasterosteus aculeatus	43.08	2.00e-179	622.00
IUUC-Ggo-044503	Gorilla gorilla	91.53	0.00e+00	1724.00
IUUC-Hsa-045742	Homo sapiens	91.63	0.00e+00	1724.00
IUUC-Itr-048727	Ictidomys tridecemlineatus	92.89	0.00e+00	1745.00
IUUC-Lch-049641	Latimeria chalumnae	64.20	0.00e+00	1234.00
IUUC-Loc-052060	Lepisosteus oculatus	54.11	0.00e+00	1013.00
IUUC-Laf-054216	Loxodonta africana	92.67	0.00e+00	1735.00
IUUC-Mcc-055122	Macaca mulatta	91.65	0.00e+00	1732.00
IUUC-Meu-056537	Macropus eugenii	62.30	0.00e+00	731.00
IUUC-Mpo-057323	Magnaporthe poae	42.50	3.00e-02	34.30
IUUC-Mmr-061489	Microcebus murinus	91.32	0.00e+00	1688.00
IUUC-Mdo-062954	Monodelphis domestica	65.32	0.00e+00	1277.00
IUUC-Mmu-064369	Mus musculus	98.32	0.00e+00	1819.00
IUUC-Mpu-065774	Mustela putorius furo	92.05	0.00e+00	1708.00
IUUC-Mlu-067093	Myotis lucifugus	93.38	0.00e+00	1736.00
IUUC-Nle-068989	Nomascus leucogenys	88.66	0.00e+00	1662.00
IUUC-Opr-070263	Ochotona princeps	88.03	0.00e+00	1714.00
IUUC-Ont-071949	Oreochromis niloticus	52.95	0.00e+00	968.00
IUUC-Oan-073316	Ornithorhynchus anatinus	59.03	1.00e-101	363.00
IUUC-Ocu-074369	Oryctolagus cuniculus	92.89	0.00e+00	1743.00
IUUC-Ome-081815	Oryza meridionalis	43.18	2.10e-01	33.50
IUUC-Ola-086354	Oryzias latipes	54.23	2.00e-161	563.00
IUUC-Olu-087743	Ostreococcus lucimarinus	31.11	2.00e-04	40.80
IUUC-Oga-088392	Otolemur garnettii	91.84	0.00e+00	1697.00
IUUC-Oar-089595	Ovis aries	87.61	0.00e+00	1590.00
IUUC-Ptr-091635	Pan troglodytes	91.53	0.00e+00	1723.00
IUUC-Pan-091939	Papio anubis	91.53	0.00e+00	1724.00
IUUC-Psi-093872	Pelodiscus sinensis	70.15	5.00e-136	477.00
IUUC-Pma-094149	Petromyzon marinus	43.26	1.00e-121	430.00
IUUC-Ppa-095311	Physcomitrella patens	42.86	3.90e-02	32.70
IUUC-Pfo-097082	Poecilia formosa	50.81	0.00e+00	934.00
IUUC-Pab-098093	Pongo abelii	89.21	0.00e+00	1682.00
IUUC-Pca-101065	Procavia capensis	86.70	0.00e+00	1659.00
IUUC-Pva-102398	Pteropus vampyrus	88.02	0.00e+00	1070.00
IUUC-Sha-107170	Sarcophilus harrisii	62.43	0.00e+00	933.00
IUUC-Stu-112162	Solanum tuberosum	33.33	3.40e-02	32.70
IUUC-Sar-112976	Sorex araneus	87.31	3.00e-129	456.00
IUUC-Ssc-115623	Sus scrofa	68.12	0.00e+00	1058.00
IUUC-Tru-118657	Takifugu rubripes	52.41	0.00e+00	963.00
IUUC-Tsy-119410	Tarsius syrichta	80.13	4.00e-179	621.00
IUUC-Tni-119696	Tetraodon nigroviridis	51.18	0.00e+00	964.00
IUUC-Tca-121485	Theobroma cacao	47.06	1.20e-02	34.30
IUUC-Tbe-128027	Tupaia belangeri	92.08	0.00e+00	1000.00
IUUC-Ttr-129142	Tursiops truncatus	87.37	0.00e+00	856.00
IUUC-Vpa-130738	Vicugna pacos	74.80	3.00e-103	369.00
IUUC-Xtr-132546	Xenopus tropicalis	62.95	0.00e+00	1241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence