iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117848

Ensembl Protein ID

ENSTRUP00000024522.1

UniProt Accession

H2TIM0; H2TIM0_TAKRU

Protein Name

Uncharacterized protein

Gene Name

wdr43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000009764.1	ENSTRUT00000024620.1	ENSTRUP00000024521.1
ENSTRUG00000009764.1	ENSTRUT00000024621.1	ENSTRUP00000024522.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-19	68.7	117	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+c+++ ++  ll sGsdD +i  WDl tg+ 
   Q: 117  GHSGGVNCVQWhPEdSLLYSGSDDTNIVEWDLQTGKT 153
           8***********7779****************99975 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MAADGGSASV QLPCVFSPKT QQYLALCAQD GKLRIWNTDS KTLHQEYVPS AHLSATCICI 60
SWGPCRTLKE RPQRKKRKSE AARVEESADL LAMGTAAGTV LIYSTTKGAL HCTLDGGHSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCAGAAA TGGCGGCCGA TGGTGGCAGC GCTTCGGTCC AGCTACCTTG CGTTTTTTCA 60
CCCAAAACAC AGCAGTACTT AGCTTTGTGT GCCCAAGACG GCAAACTTCG CATATGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001525--P:angiogenesis
GO:0048703--P:embryonic viscerocranium morphogenesis
GO:0060218--P:hematopoietic stem cell differentiation
GO:0042254--P:ribosome biogenesis
GO:0001570--P:vasculogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	53.92	2.00e-179	622.00
IUUC-Atr-002533	Amborella trichopoda	21.86	2.00e-25	110.00
IUUC-Apl-003242	Anas platyrhynchos	57.01	2.00e-174	605.00
IUUC-Aca-004607	Anolis carolinensis	55.39	0.00e+00	645.00
IUUC-Aly-006074	Arabidopsis lyrata	29.89	2.00e-20	94.00
IUUC-Ath-007222	Arabidopsis thaliana	30.15	4.00e-20	92.80
IUUC-Ame-011014	Astyanax mexicanus	69.15	0.00e+00	775.00
IUUC-Bta-012605	Bos taurus	53.80	3.00e-180	625.00
IUUC-Bdi-014072	Brachypodium distachyon	21.43	1.00e-21	98.20
IUUC-Bol-016255	Brassica oleracea	25.13	4.00e-28	119.00
IUUC-Bra-017484	Brassica rapa	31.92	3.00e-26	113.00
IUUC-Cja-019620	Callithrix jacchus	53.96	0.00e+00	633.00
IUUC-Cfa-020520	Canis familiaris	53.32	4.00e-180	624.00
IUUC-Cpo-022456	Cavia porcellus	52.31	7.00e-172	597.00
IUUC-Cho-024726	Choloepus hoffmanni	54.44	2.00e-170	592.00
IUUC-Cin-025761	Ciona intestinalis	34.49	5.00e-84	305.00
IUUC-Dre-028051	Danio rerio	70.82	0.00e+00	794.00
IUUC-Dno-030031	Dasypus novemcinctus	53.99	0.00e+00	632.00
IUUC-Dme-031653	Drosophila melanogaster	25.99	2.00e-39	157.00
IUUC-Ete-032863	Echinops telfairi	62.24	9.00e-52	198.00
IUUC-Eca-033243	Equus caballus	53.19	3.00e-152	531.00
IUUC-Eeu-034970	Erinaceus europaeus	51.58	5.00e-124	438.00
IUUC-Fca-036009	Felis catus	54.78	7.00e-179	620.00
IUUC-Fal-037264	Ficedula albicollis	56.30	5.00e-168	584.00
IUUC-Gmo-039124	Gadus morhua	77.60	0.00e+00	887.00
IUUC-Gga-040862	Gallus gallus	56.14	0.00e+00	644.00
IUUC-Gac-041468	Gasterosteus aculeatus	80.73	0.00e+00	934.00
IUUC-Gma-042795	Glycine max	23.27	6.00e-17	82.80
IUUC-Ggo-044432	Gorilla gorilla	53.47	0.00e+00	630.00
IUUC-Hsa-047036	Homo sapiens	53.63	0.00e+00	630.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	53.55	4.00e-178	618.00
IUUC-Lch-049553	Latimeria chalumnae	56.00	1.00e-175	609.00
IUUC-Laf-053462	Loxodonta africana	53.49	0.00e+00	630.00
IUUC-Mcc-055239	Macaca mulatta	53.47	1.00e-180	626.00
IUUC-Mtr-057977	Medicago truncatula	27.16	8.00e-19	88.60
IUUC-Mga-060079	Meleagris gallopavo	56.82	7.00e-167	580.00
IUUC-Mmr-061472	Microcebus murinus	54.29	0.00e+00	635.00
IUUC-Mdo-061972	Monodelphis domestica	53.99	0.00e+00	644.00
IUUC-Mmu-063354	Mus musculus	53.39	2.00e-179	622.00
IUUC-Mac-065064	Musa acuminata	25.88	1.00e-20	94.40
IUUC-Mpu-066877	Mustela putorius furo	54.78	0.00e+00	627.00
IUUC-Mlu-067476	Myotis lucifugus	51.58	1.00e-172	600.00
IUUC-Nle-069119	Nomascus leucogenys	53.96	0.00e+00	631.00
IUUC-Ont-072093	Oreochromis niloticus	78.97	0.00e+00	1019.00
IUUC-Oan-072944	Ornithorhynchus anatinus	55.01	2.00e-164	572.00
IUUC-Ocu-074472	Oryctolagus cuniculus	53.82	1.00e-174	606.00
IUUC-Oba-075009	Oryza barthii	23.63	2.00e-17	84.00
IUUC-Ogl-077189	Oryza glaberrima	22.95	1.00e-16	81.30
IUUC-Oin-079064	Oryza indica	23.63	4.00e-17	83.20
IUUC-Opu-083604	Oryza punctata	23.69	4.00e-18	86.70
IUUC-Oru-084620	Oryza rufipogon	23.63	4.00e-17	83.20
IUUC-Osa-085345	Oryza sativa	23.63	2.00e-17	84.00
IUUC-Ola-086626	Oryzias latipes	74.52	0.00e+00	958.00
IUUC-Oga-087911	Otolemur garnettii	54.21	4.00e-180	624.00
IUUC-Ptr-091603	Pan troglodytes	53.80	0.00e+00	631.00
IUUC-Pan-092569	Papio anubis	53.47	1.00e-180	626.00
IUUC-Pma-094287	Petromyzon marinus	50.34	4.00e-166	577.00
IUUC-Ppa-095327	Physcomitrella patens	27.25	3.00e-25	110.00
IUUC-Pfo-097292	Poecilia formosa	80.07	0.00e+00	934.00
IUUC-Pab-097878	Pongo abelii	54.04	0.00e+00	627.00
IUUC-Pop-099418	Populus trichocarpa	28.29	1.00e-19	91.30
IUUC-Pca-100941	Procavia capensis	51.49	9.00e-162	563.00
IUUC-Ppe-101779	Prunus persica	26.69	2.00e-19	90.90
IUUC-Pva-102493	Pteropus vampyrus	50.17	3.00e-159	555.00
IUUC-Rno-105084	Rattus norvegicus	52.89	1.00e-173	603.00
IUUC-Sha-107486	Sarcophilus harrisii	55.22	0.00e+00	642.00
IUUC-Smo-108825	Selaginella moellendorffii	22.26	7.00e-19	89.00
IUUC-Sit-110825	Setaria italica	25.00	9.00e-18	85.10
IUUC-Sly-111365	Solanum lycopersicum	22.98	3.00e-21	96.70
IUUC-Stu-112812	Solanum tuberosum	24.62	3.00e-19	90.10
IUUC-Sar-113326	Sorex araneus	60.09	7.00e-83	301.00
IUUC-Sbi-114426	Sorghum bicolor	23.12	5.00e-21	95.90
IUUC-Tgu-116726	Taeniopygia guttata	55.54	0.00e+00	642.00
IUUC-Tsy-119091	Tarsius syrichta	43.23	4.00e-78	285.00
IUUC-Tni-120591	Tetraodon nigroviridis	83.87	0.00e+00	1058.00
IUUC-Tca-121576	Theobroma cacao	26.75	1.00e-18	88.20
IUUC-Tae-122683	Triticum aestivum	23.95	3.00e-20	93.20
IUUC-Tbe-127832	Tupaia belangeri	54.32	1.00e-158	552.00
IUUC-Ttr-128812	Tursiops truncatus	53.51	7.00e-154	537.00
IUUC-Xma-133557	Xiphophorus maculatus	79.90	0.00e+00	931.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence