iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120977

Ensembl Protein ID

EOX98554

UniProt Accession

A0A061E0I9; A0A061E0I9_THECC

Genbank Protein ID

EOX98554.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_007281

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_007281	EOX98554	EOX98554

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-28	98.0	65	109
UBD/Beta-Prp	6.10e-40	138.2	16	223

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tl....lvsGsdDgtikvWDlrtgvllks 38
           gH++ v  la+  +d  +    +vsG+ D  + vWDlrtg +++s
   Q: 65   GHSSFVGPLAWisPDeEFpeggIVSGGMDTMVFVWDLRTGEKVQS 109
           79999999****9775557788******************99986 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls.....tgkcvhtlkghedsvlslsfsp.....sgdklvsGshdrtirvwdletgqcleetlsghd 137
            l ghe+ v+ ++   ++  ++t+s+Drt++ w+l+     ++    +l gh++ v  l++           +vsG+ d ++ vwdl+tg++++  l+gh+
   Q: 16   HLRGHEDDVRGICVCGSE-GIATSSRDRTVRFWSLDssdkrKYVSSKILLGHSSFVGPLAWISpdeefPEGGIVSGGMDTMVFVWDLRTGEKVQ-SLKGHQ 114
           589***********9998.7*************77644522333334566********99987676544578**********************.****** PP
   S: 138  gvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlv 238
             v++v ++     +vs+s D t+r W  ++g+ ++ ++  h+++++ ++  ++g elvsgs+d+t+klw    ++cv+t+ ghtd+v+ +++   +  ++
   Q: 115  LQVTGVLLDN--GDIVSSSVDCTLRRW--RNGQPVESWEA-HKSAIQAVIKLPSG-ELVSGSTDTTLKLWRG--KTCVHTFVGHTDTVRGLAVM-PGLGVL 206
           ********99..889************..99*******98.***********976.9*************87..789*****************.888999 PP
   S: 239  sgssDgsiriWdlrsgdl 256
           s+s+Dgsir+W  +sg++
   Q: 207  SASHDGSIRLW-AQSGEV 223
           ***********.677765 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSMEIDFKE YQLRCHLRGH EDDVRGICVC GSEGIATSSR DRTVRFWSLD SSDKRKYVSS 60
KILLGHSSFV GPLAWISPDE EFPEGGIVSG GMDTMVFVWD LRTGEKVQSL KGHQLQVTGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAATTA GAGACACGTT TGATTCATAG AATAGATAAT AATAAAATAA AATATAATAT 60
AATATTTATT ACTTTATTTG ATATAATGAA TAGAATAAAA TAAAAATTAT TATTATGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	59.76	0.00e+00	910.00
IUUC-Aml-002125	Ailuropoda melanoleuca	30.99	3.00e-100	358.00
IUUC-Atr-002554	Amborella trichopoda	64.56	0.00e+00	985.00
IUUC-Apl-004094	Anas platyrhynchos	30.39	2.00e-93	336.00
IUUC-Aca-004726	Anolis carolinensis	31.10	1.00e-98	353.00
IUUC-Aly-005961	Arabidopsis lyrata	70.76	0.00e+00	1102.00
IUUC-Ath-006639	Arabidopsis thaliana	70.63	0.00e+00	1085.00
IUUC-Ago-007772	Ashbya gossypii	28.01	9.00e-66	244.00
IUUC-Acl-008316	Aspergillus clavatus	29.72	3.00e-67	249.00
IUUC-Afl-008532	Aspergillus flavus	29.99	2.00e-77	282.00
IUUC-Afu-008950	Aspergillus fumigatus	31.32	4.00e-81	295.00
IUUC-Ani-009186	Aspergillus nidulans	30.53	3.00e-81	295.00
IUUC-Ang-009575	Aspergillus niger	30.06	3.00e-73	268.00
IUUC-Aor-010086	Aspergillus oryzae	29.99	2.00e-77	282.00
IUUC-Ate-010541	Aspergillus terreus	30.12	3.00e-79	288.00
IUUC-Ame-011633	Astyanax mexicanus	32.14	2.00e-102	365.00
IUUC-Bgr-012292	Blumeria graminis	27.73	8.00e-73	267.00
IUUC-Bta-013218	Bos taurus	31.25	5.00e-102	364.00
IUUC-Bci-013876	Botrytis cinerea	30.37	6.00e-84	304.00
IUUC-Bdi-014810	Brachypodium distachyon	62.63	0.00e+00	988.00
IUUC-Bol-016006	Brassica oleracea	71.65	0.00e+00	1123.00
IUUC-Bra-017593	Brassica rapa	71.39	0.00e+00	1122.00
IUUC-Cel-018703	Caenorhabditis elegans	22.89	1.00e-34	140.00
IUUC-Cja-019270	Callithrix jacchus	31.20	5.00e-103	367.00
IUUC-Cfa-021262	Canis familiaris	30.91	5.00e-101	361.00
IUUC-Cpo-021449	Cavia porcellus	30.61	2.00e-90	326.00
IUUC-Csa-024140	Chlorocebus sabaeus	31.07	2.00e-103	369.00
IUUC-Cho-024923	Choloepus hoffmanni	37.07	2.00e-39	156.00
IUUC-Cin-025373	Ciona intestinalis	30.28	3.00e-87	315.00
IUUC-Csv-026324	Ciona savignyi	30.52	8.00e-81	294.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	28.50	4.00e-67	248.00
IUUC-Cne-026998	Cryptococcus neoformans	30.36	2.00e-47	183.00
IUUC-Cme-027154	Cyanidioschyzon merolae	30.13	5.00e-46	178.00
IUUC-Dre-028674	Danio rerio	31.35	9.00e-99	353.00
IUUC-Dno-028966	Dasypus novemcinctus	30.29	4.00e-101	361.00
IUUC-Dor-030343	Dipodomys ordii	27.68	8.00e-48	184.00
IUUC-Dse-031385	Dothistroma septosporum	26.72	1.00e-61	230.00
IUUC-Dme-032044	Drosophila melanogaster	27.99	1.00e-71	263.00
IUUC-Ete-032506	Echinops telfairi	32.73	3.00e-35	142.00
IUUC-Eca-033547	Equus caballus	30.59	1.00e-101	363.00
IUUC-Eeu-034462	Erinaceus europaeus	37.50	3.00e-39	155.00
IUUC-Fca-035893	Felis catus	30.80	1.00e-99	357.00
IUUC-Fal-037235	Ficedula albicollis	30.22	4.00e-100	358.00
IUUC-Fox-037836	Fusarium oxysporum	28.55	1.00e-76	280.00
IUUC-Fso-038251	Fusarium solani	27.74	2.00e-75	276.00
IUUC-Gmo-038648	Gadus morhua	32.26	5.00e-97	347.00
IUUC-Ggr-039867	Gaeumannomyces graminis	29.48	9.00e-77	280.00
IUUC-Gga-040989	Gallus gallus	32.92	3.00e-105	375.00
IUUC-Gac-041344	Gasterosteus aculeatus	34.77	1.00e-80	293.00
IUUC-Gma-043067	Glycine max	75.32	0.00e+00	1168.00
IUUC-Ggo-045009	Gorilla gorilla	34.69	5.00e-87	314.00
IUUC-Hsa-046807	Homo sapiens	31.56	3.00e-102	365.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	31.16	4.00e-103	368.00
IUUC-Kpa-049134	Komagataella pastoris	33.04	2.00e-61	229.00
IUUC-Lch-049597	Latimeria chalumnae	34.40	2.00e-68	252.00
IUUC-Lpe-050821	Leersia perrieri	60.43	0.00e+00	957.00
IUUC-Loc-051849	Lepisosteus oculatus	31.97	3.00e-103	368.00
IUUC-Lma-053297	Leptosphaeria maculans	30.46	2.00e-80	293.00
IUUC-Laf-053495	Loxodonta africana	30.65	2.00e-101	362.00
IUUC-Meu-055983	Macropus eugenii	36.87	1.00e-32	134.00
IUUC-Mor-057006	Magnaporthe oryzae	28.09	2.00e-67	249.00
IUUC-Mpo-057465	Magnaporthe poae	28.38	5.00e-73	268.00
IUUC-Mtr-058374	Medicago truncatula	71.59	0.00e+00	1158.00
IUUC-Mla-058895	Melampsora laricipopulina	33.92	7.00e-61	227.00
IUUC-Mvi-060297	Microbotryum violaceum	29.78	8.00e-77	281.00
IUUC-Mmr-060810	Microcebus murinus	29.89	2.00e-91	329.00
IUUC-Mdo-062671	Monodelphis domestica	31.25	1.00e-100	360.00
IUUC-Mmu-063536	Mus musculus	30.94	4.00e-100	358.00
IUUC-Mac-064902	Musa acuminata	66.12	0.00e+00	1038.00
IUUC-Mpu-066085	Mustela putorius furo	31.24	1.00e-101	363.00
IUUC-Mlu-067907	Myotis lucifugus	35.32	2.00e-82	298.00
IUUC-Nfi-068457	Neosartorya fischeri	29.87	3.00e-60	225.00
IUUC-Ncr-068622	Neurospora crassa	28.69	5.00e-77	281.00
IUUC-Nle-069049	Nomascus leucogenys	30.96	3.00e-98	352.00
IUUC-Opr-071013	Ochotona princeps	34.43	2.00e-24	107.00
IUUC-Ont-071339	Oreochromis niloticus	32.98	4.00e-105	375.00
IUUC-Oan-073353	Ornithorhynchus anatinus	39.06	5.00e-40	156.00
IUUC-Ocu-074625	Oryctolagus cuniculus	31.88	1.00e-103	370.00
IUUC-Oba-075226	Oryza barthii	56.36	0.00e+00	844.00
IUUC-Obr-076875	Oryza brachyantha	61.58	0.00e+00	1005.00
IUUC-Ogl-077057	Oryza glaberrima	62.21	0.00e+00	984.00
IUUC-Ogu-078156	Oryza glumaepatula	62.21	0.00e+00	983.00
IUUC-Oin-079373	Oryza indica	62.34	0.00e+00	981.00
IUUC-Olo-080849	Oryza longistaminata	52.37	0.00e+00	663.00
IUUC-Ome-081654	Oryza meridionalis	56.36	0.00e+00	844.00
IUUC-Oni-082221	Oryza nivara	57.12	0.00e+00	858.00
IUUC-Opu-084103	Oryza punctata	57.00	0.00e+00	833.00
IUUC-Oru-084751	Oryza rufipogon	56.36	0.00e+00	841.00
IUUC-Osa-085584	Oryza sativa	62.60	0.00e+00	989.00
IUUC-Ola-086974	Oryzias latipes	31.07	4.00e-100	358.00
IUUC-Oga-088052	Otolemur garnettii	28.82	8.00e-90	324.00
IUUC-Oar-089509	Ovis aries	30.47	5.00e-99	354.00
IUUC-Ptr-090911	Pan troglodytes	31.56	4.00e-102	365.00
IUUC-Pan-092141	Papio anubis	30.96	1.00e-101	363.00
IUUC-Psi-093543	Pelodiscus sinensis	30.93	3.00e-90	325.00
IUUC-Pno-094952	Phaeosphaeria nodorum	28.85	6.00e-74	271.00
IUUC-Ppa-095881	Physcomitrella patens	54.47	0.00e+00	833.00
IUUC-Pfo-096739	Poecilia formosa	31.48	6.00e-97	347.00
IUUC-Pab-098641	Pongo abelii	31.53	3.00e-102	365.00
IUUC-Pop-099493	Populus trichocarpa	75.35	0.00e+00	1154.00
IUUC-Pca-100599	Procavia capensis	28.03	1.00e-77	283.00
IUUC-Ppe-101874	Prunus persica	77.34	0.00e+00	1230.00
IUUC-Pva-103009	Pteropus vampyrus	30.38	7.00e-80	291.00
IUUC-Pgr-103260	Puccinia graminis	30.37	5.00e-74	271.00
IUUC-Ptt-103711	Puccinia triticina	27.81	3.00e-59	222.00
IUUC-Pte-104337	Pyrenophora teres	30.33	4.00e-78	285.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	30.21	4.00e-77	281.00
IUUC-Rno-105273	Rattus norvegicus	30.69	2.00e-100	359.00
IUUC-Sce-106351	Saccharomyces cerevisiae	34.44	7.00e-57	214.00
IUUC-Sha-106758	Sarcophilus harrisii	30.81	5.00e-100	358.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	34.80	1.00e-77	283.00
IUUC-Spo-108093	Schizosaccharomyces pombe	30.12	2.00e-89	322.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	30.59	2.00e-79	290.00
IUUC-Smo-109368	Selaginella moellendorffii	50.50	0.00e+00	758.00
IUUC-Sit-109699	Setaria italica	62.42	0.00e+00	1006.00
IUUC-Sly-111063	Solanum lycopersicum	73.42	0.00e+00	1126.00
IUUC-Sar-113199	Sorex araneus	38.03	1.00e-68	253.00
IUUC-Sbi-114745	Sorghum bicolor	60.20	0.00e+00	966.00
IUUC-Sre-115080	Sporisorium reilianum	35.19	4.00e-71	262.00
IUUC-Ssc-115666	Sus scrofa	30.07	6.00e-101	361.00
IUUC-Tgu-116877	Taeniopygia guttata	30.91	2.00e-99	356.00
IUUC-Tru-117580	Takifugu rubripes	31.94	9.00e-102	363.00
IUUC-Tsy-118946	Tarsius syrichta	29.80	4.00e-89	321.00
IUUC-Tni-119755	Tetraodon nigroviridis	31.01	6.00e-94	337.00
IUUC-Tre-122217	Trichoderma reesei	29.62	1.00e-81	296.00
IUUC-Tvi-122671	Trichoderma virens	29.35	7.00e-79	287.00
IUUC-Tae-125266	Triticum aestivum	61.99	0.00e+00	1003.00
IUUC-Tur-126404	Triticum urartu	42.55	1.00e-76	280.00
IUUC-Tme-126971	Tuber melanosporum	33.42	2.00e-106	379.00
IUUC-Ttr-128173	Tursiops truncatus	31.08	4.00e-101	361.00
IUUC-Uma-129322	Ustilago maydis	27.90	1.00e-76	280.00
IUUC-Vda-129682	Verticillium dahliae	29.60	2.00e-77	282.00
IUUC-Vpa-130607	Vicugna pacos	29.78	2.00e-90	326.00
IUUC-Vvi-131153	Vitis vinifera	75.32	0.00e+00	1192.00
IUUC-Xtr-132208	Xenopus tropicalis	30.12	1.00e-101	363.00
IUUC-Xma-133098	Xiphophorus maculatus	30.15	4.00e-90	325.00
IUUC-Yli-134646	Yarrowia lipolytica	34.24	2.00e-69	256.00
IUUC-Zma-135920	Zea mays	56.85	0.00e+00	934.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence