iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054287

Ensembl Protein ID

ENSLAFP00000011750.3

UniProt Accession

G3TCG2; G3TCG2_LOXAF

Protein Name

Uncharacterized protein

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000014031.3	ENSLAFT00000014030.3	ENSLAFP00000011750.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-14	52.3	51	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ vt++++ ++ +++v+++ D + +vW l
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWTL 81
           9**********888***************76 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR SQIAICPNNH EVHIYEKSGA KWVKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGHVWKPTL VILRINRAAR CVRWAPRENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTACC ACAGCTTCCT GGTGGAGCCC ATCAGCTGCC ATGCCTGGAA CAAGGACCGT 60
TCCCGTGAGT GCCTGCTGGG CCGTGGGGGC GGGTGGGAGG CAGGCTTGGG CACCCTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001709	Ailuropoda melanoleuca	93.88	0.00e+00	720.00
IUUC-Ame-011512	Astyanax mexicanus	78.67	0.00e+00	634.00
IUUC-Bta-012442	Bos taurus	91.73	0.00e+00	696.00
IUUC-Cja-019899	Callithrix jacchus	92.57	0.00e+00	704.00
IUUC-Cfa-020067	Canis familiaris	92.82	0.00e+00	702.00
IUUC-Cpo-022461	Cavia porcellus	93.62	0.00e+00	709.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.71	6.00e-35	140.00
IUUC-Csa-023277	Chlorocebus sabaeus	86.17	0.00e+00	661.00
IUUC-Dre-028141	Danio rerio	78.93	1.00e-180	625.00
IUUC-Dor-030559	Dipodomys ordii	93.09	0.00e+00	707.00
IUUC-Ete-032299	Echinops telfairi	92.82	0.00e+00	703.00
IUUC-Eca-033593	Equus caballus	92.57	0.00e+00	699.00
IUUC-Fca-036254	Felis catus	94.41	0.00e+00	711.00
IUUC-Fal-037453	Ficedula albicollis	85.19	0.00e+00	671.00
IUUC-Gmo-038471	Gadus morhua	69.58	4.00e-161	560.00
IUUC-Gga-040898	Gallus gallus	84.57	0.00e+00	672.00
IUUC-Gac-042236	Gasterosteus aculeatus	73.25	1.00e-171	595.00
IUUC-Ggo-045355	Gorilla gorilla	77.98	8.00e-162	562.00
IUUC-Hsa-046623	Homo sapiens	93.09	0.00e+00	706.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	93.88	0.00e+00	714.00
IUUC-Lch-049679	Latimeria chalumnae	76.80	8.00e-179	619.00
IUUC-Loc-052140	Lepisosteus oculatus	78.13	3.00e-180	624.00
IUUC-Meu-056302	Macropus eugenii	87.23	0.00e+00	687.00
IUUC-Mga-059279	Meleagris gallopavo	84.57	0.00e+00	672.00
IUUC-Mmr-060752	Microcebus murinus	93.15	0.00e+00	692.00
IUUC-Mdo-062836	Monodelphis domestica	83.78	0.00e+00	648.00
IUUC-Mmu-064099	Mus musculus	94.41	0.00e+00	715.00
IUUC-Mpu-066247	Mustela putorius furo	93.35	0.00e+00	696.00
IUUC-Mlu-067571	Myotis lucifugus	92.29	0.00e+00	706.00
IUUC-Nle-069492	Nomascus leucogenys	80.90	7.00e-167	579.00
IUUC-Ont-071316	Oreochromis niloticus	74.29	2.00e-174	604.00
IUUC-Oan-072692	Ornithorhynchus anatinus	85.64	0.00e+00	677.00
IUUC-Ocu-074187	Oryctolagus cuniculus	88.83	0.00e+00	676.00
IUUC-Oga-088610	Otolemur garnettii	94.15	0.00e+00	709.00
IUUC-Oar-089639	Ovis aries	90.67	0.00e+00	681.00
IUUC-Ptr-091023	Pan troglodytes	93.35	0.00e+00	709.00
IUUC-Pan-091727	Papio anubis	93.35	0.00e+00	709.00
IUUC-Pfo-097058	Poecilia formosa	72.21	8.00e-170	589.00
IUUC-Pab-098238	Pongo abelii	92.82	0.00e+00	710.00
IUUC-Pca-100580	Procavia capensis	94.15	0.00e+00	701.00
IUUC-Ppe-101681	Prunus persica	41.62	2.00e-79	288.00
IUUC-Pva-102928	Pteropus vampyrus	90.69	0.00e+00	673.00
IUUC-Rno-104846	Rattus norvegicus	93.09	0.00e+00	704.00
IUUC-Sar-113404	Sorex araneus	94.24	7.00e-135	473.00
IUUC-Tru-118106	Takifugu rubripes	72.40	4.00e-172	597.00
IUUC-Tni-120079	Tetraodon nigroviridis	73.44	1.00e-173	602.00
IUUC-Ttr-128698	Tursiops truncatus	92.82	0.00e+00	711.00
IUUC-Vvi-131647	Vitis vinifera	41.82	3.00e-79	288.00
IUUC-Xtr-131893	Xenopus tropicalis	80.05	0.00e+00	639.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence