iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002203

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01155114

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000007255.1	ENSAMET00000007965.1	ENSAMEP00000007644.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-11	43.4	240	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +vt +a+    d++l+++s D t+k+WDlr+
   Q: 240  HKKKVTHVALnpcCDWFLATASVDQTVKIWDLRQ 273
           7888999999975559***************986 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MAPRKRPETQ KTPEVSVRPK SKRSRSPREL EPEAKKLCVK GPGSSRRFDS GCLWAGLASL 60
QVPPPYSIVR ALHQHKLGNT AWPSLQQGLQ QAFLHSLASY RIFQKAAPFD RRATSLAWHP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCTA GGAAACGCCC AGAAACCCAG AAGACCCCCG AGGTGTCTGT GCGCCCCAAG 60
AGCAAGAGGA GCAGAAGCCC CCGGGAGCTG GAGCCCGAGG CCAAGAAGCT CTGTGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

KEGG

aml:100479738

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	29.01	4.00e-29	122.00
IUUC-Atr-002957	Amborella trichopoda	29.88	1.00e-34	140.00
IUUC-Apl-003832	Anas platyrhynchos	53.27	8.00e-126	443.00
IUUC-Aca-004358	Anolis carolinensis	54.28	4.00e-132	464.00
IUUC-Aly-006296	Arabidopsis lyrata	30.49	4.00e-33	136.00
IUUC-Ath-007115	Arabidopsis thaliana	30.49	2.00e-34	140.00
IUUC-Ago-007715	Ashbya gossypii	22.89	7.00e-11	62.00
IUUC-Ame-010817	Astyanax mexicanus	51.13	2.00e-122	432.00
IUUC-Bta-012914	Bos taurus	91.75	0.00e+00	808.00
IUUC-Bdi-014261	Brachypodium distachyon	29.63	1.00e-29	124.00
IUUC-Bol-015317	Brassica oleracea	29.45	4.00e-33	135.00
IUUC-Bra-016848	Brassica rapa	30.37	3.00e-33	136.00
IUUC-Cja-018967	Callithrix jacchus	86.38	0.00e+00	737.00
IUUC-Cfa-021238	Canis familiaris	96.48	0.00e+00	786.00
IUUC-Cpo-022063	Cavia porcellus	79.72	0.00e+00	703.00
IUUC-Csa-023382	Chlorocebus sabaeus	86.62	0.00e+00	776.00
IUUC-Cho-024805	Choloepus hoffmanni	61.94	7.00e-97	346.00
IUUC-Cin-025651	Ciona intestinalis	23.12	4.00e-10	59.70
IUUC-Cgl-026604	Colletotrichum gloeosporioides	23.30	9.00e-13	68.20
IUUC-Dre-028732	Danio rerio	49.45	5.00e-110	391.00
IUUC-Dor-030461	Dipodomys ordii	78.43	4.00e-121	427.00
IUUC-Dse-031299	Dothistroma septosporum	21.89	4.00e-10	59.70
IUUC-Ete-033038	Echinops telfairi	74.06	0.00e+00	642.00
IUUC-Eca-033772	Equus caballus	91.51	0.00e+00	746.00
IUUC-Eeu-034662	Erinaceus europaeus	66.50	1.00e-69	256.00
IUUC-Fca-036095	Felis catus	94.13	0.00e+00	792.00
IUUC-Fox-037750	Fusarium oxysporum	25.86	4.00e-13	69.30
IUUC-Fso-038198	Fusarium solani	28.02	6.00e-11	62.00
IUUC-Gmo-039683	Gadus morhua	50.42	4.00e-108	384.00
IUUC-Gga-040530	Gallus gallus	53.72	9.00e-127	446.00
IUUC-Gac-041517	Gasterosteus aculeatus	50.14	6.00e-99	354.00
IUUC-Gma-043378	Glycine max	30.72	2.00e-35	144.00
IUUC-Ggo-045364	Gorilla gorilla	87.09	0.00e+00	775.00
IUUC-Hsa-046354	Homo sapiens	86.85	0.00e+00	774.00
IUUC-Hvu-047151	Hordeum vulgare	30.29	5.00e-26	111.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	88.54	0.00e+00	773.00
IUUC-Lpe-051256	Leersia perrieri	29.32	1.00e-28	121.00
IUUC-Loc-052398	Lepisosteus oculatus	59.33	2.00e-126	446.00
IUUC-Laf-053562	Loxodonta africana	88.50	0.00e+00	749.00
IUUC-Mcc-055197	Macaca mulatta	88.81	2.00e-150	525.00
IUUC-Meu-056151	Macropus eugenii	76.28	8.00e-121	426.00
IUUC-Mtr-057940	Medicago truncatula	31.40	5.00e-34	139.00
IUUC-Mga-059923	Meleagris gallopavo	60.61	2.00e-132	466.00
IUUC-Mvi-060555	Microbotryum violaceum	23.32	7.00e-08	52.00
IUUC-Mmr-061465	Microcebus murinus	91.27	2.00e-152	531.00
IUUC-Mdo-063063	Monodelphis domestica	68.75	2.00e-161	561.00
IUUC-Mmu-064294	Mus musculus	77.83	0.00e+00	682.00
IUUC-Mac-065598	Musa acuminata	28.66	3.00e-30	126.00
IUUC-Mpu-066831	Mustela putorius furo	96.01	0.00e+00	827.00
IUUC-Mlu-067222	Myotis lucifugus	87.74	0.00e+00	770.00
IUUC-Ncr-068896	Neurospora crassa	23.47	2.00e-11	64.30
IUUC-Nle-069581	Nomascus leucogenys	87.09	0.00e+00	778.00
IUUC-Opr-070644	Ochotona princeps	82.71	0.00e+00	719.00
IUUC-Ont-072605	Oreochromis niloticus	50.97	3.00e-114	405.00
IUUC-Oan-072973	Ornithorhynchus anatinus	72.14	8.00e-150	523.00
IUUC-Ocu-074615	Oryctolagus cuniculus	84.98	0.00e+00	751.00
IUUC-Oba-075283	Oryza barthii	28.40	2.00e-28	120.00
IUUC-Obr-076605	Oryza brachyantha	30.46	2.00e-31	130.00
IUUC-Ogl-077512	Oryza glaberrima	28.40	3.00e-28	120.00
IUUC-Ogu-078329	Oryza glumaepatula	28.40	2.00e-28	120.00
IUUC-Oin-079980	Oryza indica	28.40	4.00e-28	119.00
IUUC-Olo-080516	Oryza longistaminata	28.40	1.00e-28	121.00
IUUC-Ome-081415	Oryza meridionalis	28.40	3.00e-28	120.00
IUUC-Oni-082985	Oryza nivara	28.40	4.00e-28	119.00
IUUC-Opu-084159	Oryza punctata	29.94	6.00e-30	125.00
IUUC-Oru-085137	Oryza rufipogon	28.40	1.00e-28	120.00
IUUC-Osa-085614	Oryza sativa	28.40	1.00e-28	120.00
IUUC-Ola-087044	Oryzias latipes	46.70	3.00e-104	372.00
IUUC-Olu-087680	Ostreococcus lucimarinus	24.55	3.00e-12	66.60
IUUC-Oga-088274	Otolemur garnettii	87.03	0.00e+00	753.00
IUUC-Oar-089826	Ovis aries	91.98	0.00e+00	817.00
IUUC-Ptr-091631	Pan troglodytes	86.85	0.00e+00	774.00
IUUC-Pan-092535	Papio anubis	86.85	0.00e+00	777.00
IUUC-Psi-093815	Pelodiscus sinensis	56.49	2.00e-127	449.00
IUUC-Pma-094474	Petromyzon marinus	47.77	2.00e-95	342.00
IUUC-Pno-094824	Phaeosphaeria nodorum	22.99	8.00e-11	61.60
IUUC-Ppa-095414	Physcomitrella patens	27.71	1.00e-26	114.00
IUUC-Pfo-096559	Poecilia formosa	46.47	4.00e-103	368.00
IUUC-Pab-098528	Pongo abelii	86.85	0.00e+00	775.00
IUUC-Pop-100064	Populus trichocarpa	28.05	2.00e-31	130.00
IUUC-Pca-100803	Procavia capensis	84.91	0.00e+00	731.00
IUUC-Ppe-101966	Prunus persica	29.88	1.00e-33	137.00
IUUC-Pva-103213	Pteropus vampyrus	89.62	0.00e+00	747.00
IUUC-Ptt-103899	Puccinia triticina	22.22	2.00e-09	57.40
IUUC-Rno-105087	Rattus norvegicus	80.42	0.00e+00	699.00
IUUC-Sha-107466	Sarcophilus harrisii	72.33	1.00e-159	555.00
IUUC-Smo-108958	Selaginella moellendorffii	26.95	2.00e-24	107.00
IUUC-Sit-109968	Setaria italica	28.09	5.00e-27	115.00
IUUC-Sly-111495	Solanum lycopersicum	28.83	2.00e-30	127.00
IUUC-Stu-112182	Solanum tuberosum	24.62	2.00e-12	68.20
IUUC-Sar-113272	Sorex araneus	81.36	1.00e-169	588.00
IUUC-Sbi-114706	Sorghum bicolor	26.25	8.00e-24	105.00
IUUC-Ssc-115437	Sus scrofa	91.31	0.00e+00	801.00
IUUC-Tgu-116602	Taeniopygia guttata	53.57	9.00e-126	443.00
IUUC-Tru-118698	Takifugu rubripes	50.97	3.00e-102	365.00
IUUC-Tsy-119027	Tarsius syrichta	84.21	0.00e+00	684.00
IUUC-Tni-119787	Tetraodon nigroviridis	49.44	1.00e-102	366.00
IUUC-Tca-121447	Theobroma cacao	29.00	1.00e-32	134.00
IUUC-Tre-121932	Trichoderma reesei	26.09	3.00e-13	70.10
IUUC-Tvi-122567	Trichoderma virens	24.28	2.00e-11	63.50
IUUC-Tae-125839	Triticum aestivum	29.32	2.00e-29	123.00
IUUC-Tur-126724	Triticum urartu	29.32	2.00e-29	123.00
IUUC-Tme-126958	Tuber melanosporum	28.49	3.00e-10	59.30
IUUC-Tbe-127680	Tupaia belangeri	66.67	2.00e-141	495.00
IUUC-Ttr-128201	Tursiops truncatus	82.59	0.00e+00	698.00
IUUC-Vda-129981	Verticillium dahliae	29.65	6.00e-10	59.30
IUUC-Vpa-130451	Vicugna pacos	75.46	7.00e-116	410.00
IUUC-Vvi-131001	Vitis vinifera	29.23	1.00e-33	137.00
IUUC-Xtr-132266	Xenopus tropicalis	55.02	6.00e-129	454.00
IUUC-Xma-133034	Xiphophorus maculatus	50.50	6.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence