iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ath-007704

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING/U-box protein with C6HC-type zinc finger

Genbank Nucleotide ID

AEC07797.1

Gene Name

RSL1;At2g26130;T19L18.6;T19L18_6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G26130	AT2G26130.1	AT2G26130.1

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	24388521

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEEDDLNPAG KPLYRLYFKG LVTEEKEMLL AGFGVAICGD KDDLLFDLKV SIHDPTITLL 60
EVELIALKSG LNQAVSLGIN HISICCDHEY IFELVMGIST PKQESIALLL RDVQGIRKYL 120

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Sequence Source

UniProt

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR012337--RNaseH-like_dom
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0000151--C:ubiquitin ligase complex
GO:0046872--F:metal ion binding
GO:0003676--F:nucleic acid binding
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0010431--P:seed maturation

KEGG

ath:AT2G26130

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000190	Aegilops tauschii	29.56	1.00e-20	93.20
IUUC-Ata-000190	Aegilops tauschii	29.56	1.00e-20	93.20
IUUC-Aml-001257	Ailuropoda melanoleuca	29.90	3.00e-14	72.00
IUUC-Aml-001257	Ailuropoda melanoleuca	29.90	3.00e-14	72.00
IUUC-Atr-002709	Amborella trichopoda	31.96	2.00e-22	100.00
IUUC-Atr-002709	Amborella trichopoda	31.96	2.00e-22	100.00
IUUC-Aly-006073	Arabidopsis lyrata	82.04	2.00e-107	380.00
IUUC-Aly-006073	Arabidopsis lyrata	82.04	2.00e-107	380.00
IUUC-Bol-016316	Brassica oleracea	29.92	1.00e-35	144.00
IUUC-Bol-016316	Brassica oleracea	29.92	1.00e-35	144.00
IUUC-Bra-018037	Brassica rapa	27.47	2.00e-26	113.00
IUUC-Bra-018037	Brassica rapa	27.47	2.00e-26	113.00
IUUC-Cpo-022147	Cavia porcellus	29.90	7.00e-14	70.50
IUUC-Cpo-022147	Cavia porcellus	29.90	7.00e-14	70.50
IUUC-Dme-031816	Drosophila melanogaster	23.56	1.00e-09	59.70
IUUC-Dme-031816	Drosophila melanogaster	23.56	1.00e-09	59.70
IUUC-Hvu-047484	Hordeum vulgare	33.00	2.00e-27	116.00
IUUC-Hvu-047484	Hordeum vulgare	33.00	2.00e-27	116.00
IUUC-Lch-050168	Latimeria chalumnae	29.85	1.00e-14	73.20
IUUC-Lch-050168	Latimeria chalumnae	29.85	1.00e-14	73.20
IUUC-Lpe-051649	Leersia perrieri	32.49	2.00e-24	107.00
IUUC-Lpe-051649	Leersia perrieri	32.49	2.00e-24	107.00
IUUC-Mtr-057989	Medicago truncatula	29.74	5.00e-28	117.00
IUUC-Mtr-057989	Medicago truncatula	29.74	5.00e-28	117.00
IUUC-Mdo-062839	Monodelphis domestica	30.67	6.00e-14	70.90
IUUC-Mdo-062839	Monodelphis domestica	30.67	6.00e-14	70.90
IUUC-Mac-065414	Musa acuminata	28.43	2.00e-20	92.40
IUUC-Mac-065414	Musa acuminata	28.43	2.00e-20	92.40
IUUC-Opu-083215	Oryza punctata	29.19	2.00e-23	103.00
IUUC-Opu-083215	Oryza punctata	29.19	2.00e-23	103.00
IUUC-Ppa-095998	Physcomitrella patens	28.45	2.00e-32	133.00
IUUC-Ppa-095998	Physcomitrella patens	28.45	2.00e-32	133.00
IUUC-Pop-099816	Populus trichocarpa	33.16	5.00e-26	111.00
IUUC-Pop-099816	Populus trichocarpa	33.16	5.00e-26	111.00
IUUC-Ppe-101728	Prunus persica	27.20	8.00e-29	120.00
IUUC-Ppe-101728	Prunus persica	27.20	8.00e-29	120.00
IUUC-Sha-107425	Sarcophilus harrisii	29.73	4.00e-15	74.70
IUUC-Sha-107425	Sarcophilus harrisii	29.73	4.00e-15	74.70
IUUC-Ssl-108396	Sclerotinia sclerotiorum	24.87	4.00e-12	66.20
IUUC-Ssl-108396	Sclerotinia sclerotiorum	24.87	4.00e-12	66.20
IUUC-Sly-111393	Solanum lycopersicum	26.67	3.00e-29	122.00
IUUC-Sly-111393	Solanum lycopersicum	26.67	3.00e-29	122.00
IUUC-Stu-112779	Solanum tuberosum	29.04	2.00e-27	115.00
IUUC-Stu-112779	Solanum tuberosum	29.04	2.00e-27	115.00
IUUC-Sbi-114532	Sorghum bicolor	27.14	3.00e-22	98.20
IUUC-Sbi-114532	Sorghum bicolor	27.14	3.00e-22	98.20
IUUC-Tca-121059	Theobroma cacao	33.17	2.00e-25	108.00
IUUC-Tca-121059	Theobroma cacao	33.17	2.00e-25	108.00
IUUC-Tae-124420	Triticum aestivum	34.69	3.00e-27	115.00
IUUC-Tae-124420	Triticum aestivum	34.69	3.00e-27	115.00
IUUC-Tur-126368	Triticum urartu	29.61	2.00e-22	99.00
IUUC-Tur-126368	Triticum urartu	29.61	2.00e-22	99.00
IUUC-Tme-127083	Tuber melanosporum	27.01	4.00e-11	62.00
IUUC-Tme-127083	Tuber melanosporum	27.01	4.00e-11	62.00
IUUC-Vvi-130951	Vitis vinifera	29.80	1.00e-22	99.80

Created Date

25-Jun-2017

Protein Fasta Sequence