iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132290

Ensembl Protein ID

ENSXETP00000044667.3

UniProt Accession

F7E7X5; F7E7X5_XENTR

Genbank Protein ID

ENSXETP00000044667

Protein Name

WD and tetratricopeptide repeats 1

Genbank Nucleotide ID

AAMC01036080

Gene Name

wdtc1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020662.3	ENSXETT00000044667.3	ENSXETP00000044667.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-27	92.8	51	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf..sdtllvsGsdDgtikvWDl 30
           +cl++   ++ll+sGsdD  +++WD+
   Q: 51   NCLEWneKGNLLASGSDDQHMMLWDP 76
           7****65339***************6 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MARVNIAQDI INRQIKDKRA LSFQRQHHVT DPFIRRLGLE AELQVSQFRG NCLEWNEKGN 60
LLASGSDDQH MMLWDPFHHK KLLSMHTGHT ANIFSVKFLP HSGDRILITG AADAKVHVHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCGAG TCAATATTGC TCAAGACATC ATTAACAGAC AGATAAAGGT ATGTGCAGGA 60
GATAAAATGG TCTAAAATAT GTCTTCTGCT ATGTTCTTAA CTTGGTTCGT TACTTGTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR023114--Elongated_TPR_rpt_dom
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50293--TPR_REGION
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13174--TPR_6
PF00400--WD40

SMART

SM00028--TPR
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000083	Aegilops tauschii	27.74	1.00e-52	200.00
IUUC-Aml-001699	Ailuropoda melanoleuca	77.60	0.00e+00	1080.00
IUUC-Atr-002509	Amborella trichopoda	31.95	1.00e-49	190.00
IUUC-Apl-003379	Anas platyrhynchos	78.67	0.00e+00	1097.00
IUUC-Aca-005202	Anolis carolinensis	78.79	0.00e+00	1080.00
IUUC-Aly-006475	Arabidopsis lyrata	31.74	1.00e-48	187.00
IUUC-Ath-007666	Arabidopsis thaliana	31.94	1.00e-49	191.00
IUUC-Ame-010988	Astyanax mexicanus	75.89	0.00e+00	934.00
IUUC-Bdi-014100	Brachypodium distachyon	30.28	3.00e-45	176.00
IUUC-Bol-016409	Brassica oleracea	32.60	1.00e-47	184.00
IUUC-Bra-016979	Brassica rapa	31.56	5.00e-48	186.00
IUUC-Cel-018561	Caenorhabditis elegans	30.47	2.00e-55	209.00
IUUC-Cja-019212	Callithrix jacchus	75.77	0.00e+00	1040.00
IUUC-Cfa-020200	Canis familiaris	77.45	0.00e+00	1079.00
IUUC-Cpo-021739	Cavia porcellus	77.42	0.00e+00	1078.00
IUUC-Cre-022659	Chlamydomonas reinhardtii	30.15	2.00e-27	116.00
IUUC-Csa-023648	Chlorocebus sabaeus	77.53	0.00e+00	1081.00
IUUC-Cin-025155	Ciona intestinalis	42.12	2.00e-58	219.00
IUUC-Csv-026289	Ciona savignyi	46.66	9.00e-144	503.00
IUUC-Dre-028745	Danio rerio	76.01	0.00e+00	1041.00
IUUC-Dno-029403	Dasypus novemcinctus	74.23	0.00e+00	1011.00
IUUC-Dor-030332	Dipodomys ordii	71.76	0.00e+00	963.00
IUUC-Dme-031811	Drosophila melanogaster	39.61	3.00e-112	399.00
IUUC-Ete-032331	Echinops telfairi	71.54	9.00e-110	390.00
IUUC-Eca-033783	Equus caballus	77.49	0.00e+00	1080.00
IUUC-Eeu-034732	Erinaceus europaeus	75.95	0.00e+00	1048.00
IUUC-Fca-036543	Felis catus	77.60	0.00e+00	1080.00
IUUC-Fal-037245	Ficedula albicollis	79.25	0.00e+00	1099.00
IUUC-Gmo-039346	Gadus morhua	74.00	0.00e+00	1046.00
IUUC-Gga-041034	Gallus gallus	78.67	0.00e+00	1094.00
IUUC-Gac-041297	Gasterosteus aculeatus	74.70	0.00e+00	1038.00
IUUC-Gma-042727	Glycine max	32.39	6.00e-46	179.00
IUUC-Ggo-045309	Gorilla gorilla	77.53	0.00e+00	1081.00
IUUC-Hsa-046622	Homo sapiens	77.53	0.00e+00	1081.00
IUUC-Itr-049052	Ictidomys tridecemlineatus	77.83	0.00e+00	945.00
IUUC-Lch-049810	Latimeria chalumnae	78.30	0.00e+00	1058.00
IUUC-Lpe-051600	Leersia perrieri	26.15	2.00e-48	187.00
IUUC-Loc-052088	Lepisosteus oculatus	77.48	0.00e+00	1085.00
IUUC-Laf-054097	Loxodonta africana	77.53	0.00e+00	1079.00
IUUC-Mcc-054848	Macaca mulatta	77.53	0.00e+00	1081.00
IUUC-Meu-056022	Macropus eugenii	59.89	0.00e+00	664.00
IUUC-Mtr-057735	Medicago truncatula	29.58	7.00e-44	172.00
IUUC-Mga-059622	Meleagris gallopavo	78.67	0.00e+00	1095.00
IUUC-Mmr-060709	Microcebus murinus	77.39	0.00e+00	1078.00
IUUC-Mdo-062401	Monodelphis domestica	78.49	0.00e+00	1078.00
IUUC-Mmu-063899	Mus musculus	76.25	0.00e+00	1057.00
IUUC-Mac-064840	Musa acuminata	31.80	6.00e-45	176.00
IUUC-Mpu-066268	Mustela putorius furo	77.60	0.00e+00	1080.00
IUUC-Mlu-067211	Myotis lucifugus	77.37	0.00e+00	673.00
IUUC-Nle-070019	Nomascus leucogenys	77.39	0.00e+00	1076.00
IUUC-Opr-071008	Ochotona princeps	78.09	0.00e+00	1095.00
IUUC-Ont-072123	Oreochromis niloticus	75.48	0.00e+00	1057.00
IUUC-Ocu-074166	Oryctolagus cuniculus	77.94	0.00e+00	1091.00
IUUC-Oba-075298	Oryza barthii	28.66	3.00e-38	153.00
IUUC-Obr-076849	Oryza brachyantha	27.81	3.00e-38	153.00
IUUC-Ogl-077515	Oryza glaberrima	28.66	3.00e-38	153.00
IUUC-Ogu-077968	Oryza glumaepatula	28.70	2.00e-36	147.00
IUUC-Oin-079231	Oryza indica	28.70	5.00e-36	145.00
IUUC-Olo-081045	Oryza longistaminata	27.91	8.00e-36	146.00
IUUC-Ome-081395	Oryza meridionalis	28.70	2.00e-35	144.00
IUUC-Oni-082801	Oryza nivara	28.66	3.00e-38	153.00
IUUC-Opu-083585	Oryza punctata	28.99	4.00e-36	146.00
IUUC-Oru-085163	Oryza rufipogon	28.87	1.00e-37	151.00
IUUC-Osa-085550	Oryza sativa	36.15	8.00e-24	103.00
IUUC-Ola-086925	Oryzias latipes	74.59	0.00e+00	1041.00
IUUC-Oga-088095	Otolemur garnettii	78.06	0.00e+00	1097.00
IUUC-Oar-090285	Ovis aries	75.95	0.00e+00	1043.00
IUUC-Ptr-091221	Pan troglodytes	77.53	0.00e+00	1081.00
IUUC-Pan-091771	Papio anubis	77.53	0.00e+00	1081.00
IUUC-Psi-093977	Pelodiscus sinensis	78.96	0.00e+00	1102.00
IUUC-Ppa-095373	Physcomitrella patens	30.44	1.00e-43	171.00
IUUC-Pfo-096640	Poecilia formosa	75.58	0.00e+00	1043.00
IUUC-Pab-098513	Pongo abelii	77.53	0.00e+00	1081.00
IUUC-Pop-098837	Populus trichocarpa	30.83	4.00e-45	176.00
IUUC-Pca-101095	Procavia capensis	71.37	0.00e+00	965.00
IUUC-Ppe-101507	Prunus persica	29.91	7.00e-44	172.00
IUUC-Pva-102444	Pteropus vampyrus	77.57	0.00e+00	1081.00
IUUC-Rno-105952	Rattus norvegicus	76.51	0.00e+00	1058.00
IUUC-Sha-106614	Sarcophilus harrisii	78.34	0.00e+00	1090.00
IUUC-Smo-108844	Selaginella moellendorffii	32.37	1.00e-42	167.00
IUUC-Sly-111707	Solanum lycopersicum	31.46	7.00e-46	178.00
IUUC-Sar-113129	Sorex araneus	69.26	0.00e+00	700.00
IUUC-Sbi-113858	Sorghum bicolor	28.83	1.00e-61	231.00
IUUC-Ssc-116275	Sus scrofa	77.71	0.00e+00	1080.00
IUUC-Tgu-117507	Taeniopygia guttata	78.81	0.00e+00	1097.00
IUUC-Tru-117969	Takifugu rubripes	74.05	0.00e+00	1049.00
IUUC-Tsy-119374	Tarsius syrichta	66.87	0.00e+00	661.00
IUUC-Tni-119887	Tetraodon nigroviridis	71.37	0.00e+00	1001.00
IUUC-Tca-121722	Theobroma cacao	30.52	2.00e-44	174.00
IUUC-Tae-125332	Triticum aestivum	29.28	2.00e-64	240.00
IUUC-Tur-125968	Triticum urartu	39.88	4.00e-32	134.00
IUUC-Tbe-127511	Tupaia belangeri	75.00	5.00e-70	258.00
IUUC-Ttr-128390	Tursiops truncatus	75.56	0.00e+00	998.00
IUUC-Vpa-130124	Vicugna pacos	46.40	1.00e-111	397.00
IUUC-Vvi-131565	Vitis vinifera	29.71	1.00e-32	135.00
IUUC-Xma-134025	Xiphophorus maculatus	75.27	0.00e+00	1045.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence