• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Lch-050425
Ensembl Protein ID ENSLACP00000016247.1
UniProt Accession H3B2X6; H3B2X6_LATCH
Genbank Protein ID ENSLACP00000016247
Protein Name Ubiquitinyl hydrolase 1
Genbank Nucleotide ID AFYH01036967
Gene Name USP13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000014314.1 ENSLACT00000016361.1 ENSLACP00000016247.1
ENSLACG00000014314.1 ENSLACT00000016362.1 ENSLACP00000016248.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.00e-54 186.2 317 860
UBD/Alpha-Helix/UBA 9.60e-19 67.1 727 764
Active Site
Position(s) Description Evidence
326 Nucleophile {ECO:0000256|PIRSR:PIRSR016308-1}
823 Proton acceptor {ECO:0000256|PIRSR:PIRSR016308-1}
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel......................wkskkka 67
           tG++NlgN+CY+  v+Q++++ipe+++++   + +++ + +p +p++++ ++++kl + l                      +k +++ 
   Q: 317  TGIQNLGNSCYLSTVMQVIFSIPEFQRAYVG-NLQRIYDFSPLDPTQDFNTQMAKLGQGLlsgqcskplmkselieqvmkeeYKPQQQG 404
           7*****************************9.8899999999*****99999999999998999999988888888876655599999* PP
   S: 68   vsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikc 156
           +spr++++ +++ ++efs+++qqDaqEf+ +l++ +e++                               +++  sd+F++ ++++i+c
   Q: 405  ISPRMFKALVSRGHPEFSSNRQQDAQEFFLHLINLVERNS-----------------------------NGSENPSDVFRFMVEERIQC 464
           **************************************99.............................5678899************* PP
   S: 157  lecdnvs..sreepfldlslpvpgkeetkke.........................slqdcLesftkeeelegenkyycekckkkqeae 218
            + ++v   +r +  ++l++pv+  ++++++                          ++ cL++f ++e++++   ++++  ++k+  +
   Q: 465  CQSRKVRymERIDYLMQLPVPVEAASNKDELiacelkrreaevarrpppalihakvPFSACLQAFGEPENVDD---FWSSALQAKSAGV 550
           99999985666777777777777666555449***************************************97...************* PP
   S: 219  kklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts........................................ 267
           k+ ++ ++Pe+L +++k+f+f  + ++++k++ ++++p+ Ld+++  ++                                        
   Q: 551  KTSRFASFPEYLAVQIKKFTFGLD-WVPKKLDVSIDMPDLLDITHLRATglqpgeeelpniappimipdgpkgttfynddflyyptfyy 638
           *********************997.*******************988888999999999999999999999999999999999999999 PP
   S: 268  ......................................................................................... 267
                                                                                                    
   Q: 639  qnnhlmnhfmeppeidesavmqlaemgfpleacrkavyytgnmgaeiafnwiiahmeepdfaeplvipgfgeassfgvqnavinkqppe 727
           88888888888888888888888888888888888888888888888888888888888888888888777777777777777777777 PP
   S: 268  .....................................peekqke....................................kkkYeLiav 283
                                                p     +                                    + +YeL+a 
   Q: 728  eivaiitsmgfartqaiqalkatnnnleraldwifthP-----DseeeseamsevadteintisnataeaetagprvkdgPGRYELFAF 811
           77777777777777777666666666666666666551.....0444555667777777888888888888889999999********* PP
   S: 284  vvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++H+G s+ +GHYv+++k+ +g+W+ ++D+kV ++  e+  +   + +Y++fY+r
   Q: 812  ISHMGtSTMCGHYVCHIKK-EGRWVIYNDHKVCAS--ERLPK---DLGYMYFYHR 860
           *******************.9***********999..78999...9*******97 PP
   

   UBD/Alpha-Helix/UBA
   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e++++ +++MGF r +a+qaL a+nnnle+A+++++++
   Q: 727  EEIVAIITSMGFARTQAIQALKATNNNLERALDWIFTH 764
           899*********************************98 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MAADLGELLV PYMPTIRVPR SGDRVFKSEC AFSFESPEFE GGIYVCMNTF LGFGREHVER 60
HYRKTGQCVY MHLKRHIREK ATGASGGTLP KIRNVRLFLD LETSAELNND DFEYEDEAKL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050425|DUB,USP;UBD,UBA|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTAAAATACA GCAGCATTGT GGGTTTGGGA GCAGGAATGT GAAGATGGCT GCAGACCTGG 60
GAGAGCTGCT GGTCCCATAC ATGCCCACCA TCAGGGTCCC CAGATCAGGG GATCGGGTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050425|DUB,USP;UBD,UBA|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP
PROSITE

PS50030--UBA
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP
Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP
SMART

SM00165--UBA
SM00290--ZnF_UBP
Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001356 Ailuropoda melanoleuca 76.62 0.00e+00 1323.00
IUUC-Apl-003712 Anas platyrhynchos 79.23 0.00e+00 1310.00
IUUC-Aca-004634 Anolis carolinensis 78.89 0.00e+00 1342.00
IUUC-Ame-011470 Astyanax mexicanus 74.00 0.00e+00 1306.00
IUUC-Bta-013349 Bos taurus 76.53 0.00e+00 1335.00
IUUC-Cja-019021 Callithrix jacchus 76.88 0.00e+00 1319.00
IUUC-Cfa-020614 Canis familiaris 76.74 0.00e+00 1324.00
IUUC-Cpo-022484 Cavia porcellus 76.54 0.00e+00 1258.00
IUUC-Csa-024078 Chlorocebus sabaeus 76.88 0.00e+00 1326.00
IUUC-Cho-024522 Choloepus hoffmanni 64.69 0.00e+00 979.00
IUUC-Dre-027651 Danio rerio 75.17 0.00e+00 1367.00
IUUC-Dno-028975 Dasypus novemcinctus 76.59 0.00e+00 1319.00
IUUC-Dor-030130 Dipodomys ordii 56.92 0.00e+00 858.00
IUUC-Ete-032251 Echinops telfairi 65.54 0.00e+00 1049.00
IUUC-Eca-033568 Equus caballus 76.90 0.00e+00 1263.00
IUUC-Fca-036280 Felis catus 76.76 0.00e+00 1261.00
IUUC-Fal-036610 Ficedula albicollis 78.78 0.00e+00 1289.00
IUUC-Gmo-038906 Gadus morhua 72.02 0.00e+00 1274.00
IUUC-Gga-041215 Gallus gallus 78.18 0.00e+00 1357.00
IUUC-Gac-042441 Gasterosteus aculeatus 72.28 0.00e+00 1298.00
IUUC-Ggo-044446 Gorilla gorilla 76.76 0.00e+00 1328.00
IUUC-Hsa-046546 Homo sapiens 76.76 0.00e+00 1325.00
IUUC-Itr-048147 Ictidomys tridecemlineatus 72.72 0.00e+00 1208.00
IUUC-Loc-052072 Lepisosteus oculatus 77.34 0.00e+00 1347.00
IUUC-Laf-053909 Loxodonta africana 75.46 0.00e+00 1307.00
IUUC-Mcc-054686 Macaca mulatta 76.88 0.00e+00 1326.00
IUUC-Meu-056361 Macropus eugenii 71.81 0.00e+00 1210.00
IUUC-Mga-059972 Meleagris gallopavo 76.29 0.00e+00 1254.00
IUUC-Mmr-060916 Microcebus murinus 76.83 0.00e+00 1322.00
IUUC-Mdo-062302 Monodelphis domestica 79.88 0.00e+00 1411.00
IUUC-Mmu-063639 Mus musculus 76.31 0.00e+00 1328.00
IUUC-Mac-065634 Musa acuminata 38.63 4.00e-172 598.00
IUUC-Mpu-066533 Mustela putorius furo 76.62 0.00e+00 1323.00
IUUC-Mlu-067786 Myotis lucifugus 74.13 0.00e+00 1238.00
IUUC-Nle-069997 Nomascus leucogenys 77.68 0.00e+00 1254.00
IUUC-Ont-071859 Oreochromis niloticus 73.93 0.00e+00 1304.00
IUUC-Oan-072959 Ornithorhynchus anatinus 82.43 5.00e-120 422.00
IUUC-Ocu-074265 Oryctolagus cuniculus 76.42 0.00e+00 1317.00
IUUC-Ola-087344 Oryzias latipes 73.83 0.00e+00 1321.00
IUUC-Oga-088734 Otolemur garnettii 76.81 0.00e+00 1310.00
IUUC-Oar-089636 Ovis aries 77.27 0.00e+00 1297.00
IUUC-Ptr-090982 Pan troglodytes 76.76 0.00e+00 1329.00
IUUC-Pan-091991 Papio anubis 76.99 0.00e+00 1328.00
IUUC-Psi-093509 Pelodiscus sinensis 81.16 0.00e+00 1404.00
IUUC-Pfo-096029 Poecilia formosa 73.27 0.00e+00 1335.00
IUUC-Pab-098672 Pongo abelii 73.18 0.00e+00 1237.00
IUUC-Pca-100860 Procavia capensis 60.45 0.00e+00 874.00
IUUC-Pva-102545 Pteropus vampyrus 71.91 0.00e+00 1216.00
IUUC-Rno-105210 Rattus norvegicus 76.43 0.00e+00 1319.00
IUUC-Sar-113733 Sorex araneus 79.35 0.00e+00 649.00
IUUC-Tgu-116591 Taeniopygia guttata 78.50 0.00e+00 1364.00
IUUC-Tru-118627 Takifugu rubripes 72.07 0.00e+00 1316.00
IUUC-Tsy-119278 Tarsius syrichta 70.01 0.00e+00 1136.00
IUUC-Tni-120804 Tetraodon nigroviridis 74.09 0.00e+00 1332.00
IUUC-Tbe-127699 Tupaia belangeri 63.27 0.00e+00 716.00
IUUC-Ttr-128295 Tursiops truncatus 71.61 0.00e+00 1196.00
IUUC-Vpa-130170 Vicugna pacos 67.31 0.00e+00 1080.00
IUUC-Xtr-132809 Xenopus tropicalis 81.55 0.00e+00 1054.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved