iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131572

UUCD1 version

UUC-ViV-00874

Ensembl Protein ID

VIT_09s0002g06030.t01

UniProt Accession

F6HX91; F6HX91_VITVI

Genbank Protein ID

CCB59561.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

PWP2; VIT_09s0002g06030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g06030	VIT_09s0002g06030.t01	VIT_09s0002g06030.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-33	113.4	476	509
UBD/Beta-Prp	9.10e-96	321.1	319	558

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+++v++l f ++  +l+s+s+D+t+++WD+ +
   Q: 476  GHEGPVHGLMFsPTnAILASSSWDKTVRLWDVFE 509
           8**********9665889*************855 PP

UBD/Beta-Prp

   S: 22   ksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdk 108
           +++l+ g++  g + vw++++++++ + +gh   v+++ +spd+++l+tg++D+ +kvw +s+g c++t+++h++ v++l+f+ +++ 
   Q: 319  GNWLTFGCAKlGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFSEHTNAVTALHFMSNNNC 406
           677888886557899************************************************************************* PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           l+s+s d t+r wdl  +  ++++ ++ ++   +++++++g ++ +G+lD++ + +W++ktg+ll+ l+g h+++v+ l f+++   l
   Q: 407  LLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFeIFVWSMKTGRLLDILSG-HEGPVHGLMFSPTNAIL 493
           **********************999999999999*****9**********965****************9.***************** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           +s s d+tv+lwd+ +g+  ++  +ht  v+ v   p+++ l++ + Dg+i +Wd   g l+ t+
   Q: 494  ASSSWDKTVRLWDVFEGKGAVETFNHTHDVLTVVYRPDGKQLACSTLDGQIHFWDPIDGLLMYTI 558
           ******************************************************96666555555 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNFRFQNLLG APYRGGNVVV SNNTLLISSV GNRISVTDLL KSQTQTLPTQ SSSNIARIAV 60
SPDGNFLLAV DDRNRCLFIN LPRRIVLHRI SFKKPVSAIR FSPDAALIAV ATGKLLQIWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTCTGCCA AAAATCATGA ATTTCAGGTT TCAAAACCTC CTGGGAGCTC CGTACAGAGG 60
TGGAAACGTC GTCGTTTCGA ACAACACTCT CCTCATCTCT TCCGTTGGCA ACCGTATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0009553--P:embryo sac development
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	40.97	0.00e+00	682.00
IUUC-Atr-003033	Amborella trichopoda	67.20	0.00e+00	1202.00
IUUC-Apl-003219	Anas platyrhynchos	41.57	0.00e+00	696.00
IUUC-Aca-004950	Anolis carolinensis	41.48	0.00e+00	697.00
IUUC-Aly-006213	Arabidopsis lyrata	70.42	0.00e+00	1260.00
IUUC-Ath-006593	Arabidopsis thaliana	69.12	0.00e+00	1249.00
IUUC-Ago-007916	Ashbya gossypii	46.26	3.00e-159	554.00
IUUC-Acl-008225	Aspergillus clavatus	42.42	0.00e+00	701.00
IUUC-Afl-008390	Aspergillus flavus	42.66	0.00e+00	710.00
IUUC-Afu-009039	Aspergillus fumigatus	43.45	0.00e+00	708.00
IUUC-Ani-009228	Aspergillus nidulans	40.07	2.00e-176	612.00
IUUC-Ang-009663	Aspergillus niger	42.99	0.00e+00	686.00
IUUC-Aor-009923	Aspergillus oryzae	42.66	0.00e+00	710.00
IUUC-Ate-010264	Aspergillus terreus	42.95	0.00e+00	710.00
IUUC-Ame-010790	Astyanax mexicanus	33.03	3.00e-61	228.00
IUUC-Bgr-012066	Blumeria graminis	41.68	0.00e+00	686.00
IUUC-Bta-012399	Bos taurus	40.53	0.00e+00	668.00
IUUC-Bci-013757	Botrytis cinerea	42.99	0.00e+00	673.00
IUUC-Bdi-015028	Brachypodium distachyon	69.64	0.00e+00	1222.00
IUUC-Bol-016040	Brassica oleracea	69.38	0.00e+00	1236.00
IUUC-Bra-017096	Brassica rapa	68.79	0.00e+00	1206.00
IUUC-Cel-018690	Caenorhabditis elegans	33.98	2.00e-141	496.00
IUUC-Cja-019229	Callithrix jacchus	48.65	8.00e-173	600.00
IUUC-Cfa-020504	Canis familiaris	41.12	0.00e+00	681.00
IUUC-Cpo-021574	Cavia porcellus	42.59	0.00e+00	706.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	52.42	0.00e+00	658.00
IUUC-Csa-023436	Chlorocebus sabaeus	42.89	0.00e+00	676.00
IUUC-Cin-025397	Ciona intestinalis	40.03	2.00e-151	528.00
IUUC-Csv-026194	Ciona savignyi	46.57	1.00e-137	483.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	41.10	0.00e+00	638.00
IUUC-Cne-027031	Cryptococcus neoformans	42.04	0.00e+00	720.00
IUUC-Cme-027276	Cyanidioschyzon merolae	30.08	4.00e-99	355.00
IUUC-Dre-027514	Danio rerio	41.87	0.00e+00	680.00
IUUC-Dno-029191	Dasypus novemcinctus	44.53	0.00e+00	629.00
IUUC-Dor-030149	Dipodomys ordii	42.09	0.00e+00	689.00
IUUC-Dse-031260	Dothistroma septosporum	45.94	1.00e-145	509.00
IUUC-Dme-032043	Drosophila melanogaster	37.04	6.00e-163	567.00
IUUC-Ete-033102	Echinops telfairi	49.71	1.00e-154	539.00
IUUC-Eca-033223	Equus caballus	42.29	0.00e+00	696.00
IUUC-Fca-035795	Felis catus	38.00	4.00e-173	600.00
IUUC-Fal-036830	Ficedula albicollis	48.98	5.00e-173	600.00
IUUC-Fox-037835	Fusarium oxysporum	40.89	0.00e+00	644.00
IUUC-Fso-038324	Fusarium solani	40.71	0.00e+00	634.00
IUUC-Gmo-039355	Gadus morhua	42.40	0.00e+00	686.00
IUUC-Ggr-039840	Gaeumannomyces graminis	40.11	2.00e-175	608.00
IUUC-Gga-040907	Gallus gallus	49.71	9.00e-157	546.00
IUUC-Gac-042624	Gasterosteus aculeatus	40.76	0.00e+00	668.00
IUUC-Gma-043034	Glycine max	75.36	0.00e+00	1404.00
IUUC-Hsa-046327	Homo sapiens	42.89	0.00e+00	699.00
IUUC-Hvu-047416	Hordeum vulgare	69.64	0.00e+00	1201.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	49.66	5.00e-176	610.00
IUUC-Kpa-049150	Komagataella pastoris	39.74	0.00e+00	637.00
IUUC-Lch-049460	Latimeria chalumnae	40.95	2.00e-177	615.00
IUUC-Lpe-050840	Leersia perrieri	70.12	0.00e+00	1235.00
IUUC-Loc-052733	Lepisosteus oculatus	40.93	0.00e+00	700.00
IUUC-Lma-053277	Leptosphaeria maculans	42.43	0.00e+00	687.00
IUUC-Laf-054294	Loxodonta africana	41.57	0.00e+00	665.00
IUUC-Mcc-054624	Macaca mulatta	42.78	0.00e+00	696.00
IUUC-Meu-056665	Macropus eugenii	47.03	7.00e-97	347.00
IUUC-Mor-057288	Magnaporthe oryzae	40.21	0.00e+00	627.00
IUUC-Mpo-057594	Magnaporthe poae	41.29	2.00e-174	605.00
IUUC-Mtr-058700	Medicago truncatula	77.14	0.00e+00	1426.00
IUUC-Mla-058846	Melampsora laricipopulina	42.86	0.00e+00	686.00
IUUC-Mga-059207	Meleagris gallopavo	37.82	4.00e-173	601.00
IUUC-Mvi-060327	Microbotryum violaceum	44.08	0.00e+00	749.00
IUUC-Mmr-061264	Microcebus murinus	42.39	0.00e+00	671.00
IUUC-Mdo-062327	Monodelphis domestica	42.60	0.00e+00	689.00
IUUC-Mmu-063542	Mus musculus	41.52	0.00e+00	680.00
IUUC-Mac-065142	Musa acuminata	77.35	0.00e+00	1375.00
IUUC-Mpu-066098	Mustela putorius furo	42.52	5.00e-176	610.00
IUUC-Mlu-067056	Myotis lucifugus	38.68	2.00e-167	582.00
IUUC-Nfi-068323	Neosartorya fischeri	43.19	0.00e+00	709.00
IUUC-Ncr-068925	Neurospora crassa	39.15	0.00e+00	665.00
IUUC-Nle-068970	Nomascus leucogenys	42.66	0.00e+00	693.00
IUUC-Opr-070966	Ochotona princeps	54.92	2.00e-106	379.00
IUUC-Ont-071252	Oreochromis niloticus	42.33	0.00e+00	685.00
IUUC-Oan-072737	Ornithorhynchus anatinus	40.43	0.00e+00	655.00
IUUC-Oba-075794	Oryza barthii	68.39	0.00e+00	1189.00
IUUC-Obr-076617	Oryza brachyantha	70.75	0.00e+00	1239.00
IUUC-Ogl-077022	Oryza glaberrima	70.09	0.00e+00	1240.00
IUUC-Ogu-078757	Oryza glumaepatula	57.05	0.00e+00	923.00
IUUC-Oin-079813	Oryza indica	70.41	0.00e+00	1240.00
IUUC-Olo-080265	Oryza longistaminata	70.75	0.00e+00	1238.00
IUUC-Ome-081494	Oryza meridionalis	70.59	0.00e+00	1239.00
IUUC-Oni-082639	Oryza nivara	57.05	0.00e+00	921.00
IUUC-Opu-084005	Oryza punctata	70.63	0.00e+00	1254.00
IUUC-Oru-084883	Oryza rufipogon	56.83	0.00e+00	918.00
IUUC-Osa-086158	Oryza sativa	70.63	0.00e+00	1242.00
IUUC-Ola-086822	Oryzias latipes	41.10	0.00e+00	672.00
IUUC-Oga-088887	Otolemur garnettii	48.82	2.00e-169	588.00
IUUC-Oar-090110	Ovis aries	40.86	0.00e+00	640.00
IUUC-Pan-092808	Papio anubis	43.42	0.00e+00	700.00
IUUC-Psi-093954	Pelodiscus sinensis	41.74	0.00e+00	710.00
IUUC-Pno-094922	Phaeosphaeria nodorum	42.79	0.00e+00	700.00
IUUC-Ppa-095678	Physcomitrella patens	56.68	0.00e+00	945.00
IUUC-Pfo-097175	Poecilia formosa	42.44	0.00e+00	706.00
IUUC-Pab-098155	Pongo abelii	41.38	0.00e+00	679.00
IUUC-Pop-099635	Populus trichocarpa	79.11	0.00e+00	1410.00
IUUC-Pca-100947	Procavia capensis	39.55	0.00e+00	635.00
IUUC-Ppe-101552	Prunus persica	79.78	0.00e+00	1478.00
IUUC-Pva-102744	Pteropus vampyrus	38.98	7.00e-171	593.00
IUUC-Pgr-103389	Puccinia graminis	42.39	0.00e+00	674.00
IUUC-Ptt-103953	Puccinia triticina	36.10	4.00e-152	531.00
IUUC-Pte-104079	Pyrenophora teres	42.18	0.00e+00	679.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	42.30	0.00e+00	684.00
IUUC-Rno-105502	Rattus norvegicus	41.65	0.00e+00	697.00
IUUC-Sce-106390	Saccharomyces cerevisiae	41.81	0.00e+00	684.00
IUUC-Sha-107264	Sarcophilus harrisii	43.14	3.00e-92	331.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	40.65	0.00e+00	690.00
IUUC-Spo-108348	Schizosaccharomyces pombe	41.44	0.00e+00	671.00
IUUC-Smo-108982	Selaginella moellendorffii	62.81	0.00e+00	1107.00
IUUC-Sit-110304	Setaria italica	70.63	0.00e+00	1273.00
IUUC-Sly-111620	Solanum lycopersicum	87.17	0.00e+00	1049.00
IUUC-Stu-112877	Solanum tuberosum	77.59	0.00e+00	1452.00
IUUC-Sbi-114702	Sorghum bicolor	71.32	0.00e+00	1263.00
IUUC-Sre-115129	Sporisorium reilianum	42.74	0.00e+00	679.00
IUUC-Ssc-115931	Sus scrofa	44.25	7.00e-98	349.00
IUUC-Tgu-116787	Taeniopygia guttata	49.32	4.00e-174	604.00
IUUC-Tru-118218	Takifugu rubripes	42.73	0.00e+00	686.00
IUUC-Tsy-119401	Tarsius syrichta	47.19	8.00e-125	440.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.49	0.00e+00	647.00
IUUC-Tca-121685	Theobroma cacao	78.69	0.00e+00	1448.00
IUUC-Tre-122154	Trichoderma reesei	42.00	0.00e+00	672.00
IUUC-Tvi-122451	Trichoderma virens	41.10	0.00e+00	665.00
IUUC-Tae-125397	Triticum aestivum	79.59	0.00e+00	770.00
IUUC-Tur-126650	Triticum urartu	70.89	0.00e+00	1136.00
IUUC-Tme-127005	Tuber melanosporum	43.42	0.00e+00	682.00
IUUC-Tbe-128102	Tupaia belangeri	56.19	8.00e-107	380.00
IUUC-Ttr-128259	Tursiops truncatus	42.49	0.00e+00	672.00
IUUC-Uma-129511	Ustilago maydis	41.70	0.00e+00	680.00
IUUC-Vda-129833	Verticillium dahliae	42.98	8.00e-140	490.00
IUUC-Xtr-131776	Xenopus tropicalis	35.53	1.00e-62	233.00
IUUC-Xma-133887	Xiphophorus maculatus	41.76	0.00e+00	684.00
IUUC-Yli-134427	Yarrowia lipolytica	42.45	0.00e+00	674.00
IUUC-Zma-135980	Zea mays	70.98	0.00e+00	1254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence