iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109980

Ensembl Protein ID

Si028811m

UniProt Accession

K3ZQD1; K3ZQD1_SETIT

Genbank Protein ID

KQL23604.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

CM003529

Gene Name

LOC101757891; SETIT_028811mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si028811m.g	Si028845m	Si028845m
Si028811m.g	Si028811m	Si028811m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-21	76.0	123	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+sGs D+t+++W+++ g ++
   Q: 123  GHTADVVDLSWsPDdSTLASGSLDNTVHIWNMTNGMCT 160
           8***********77799****************99986 PP

Organism

Setaria italica

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MITEKPSWIR HEGLQIFSID IQAGGLRFAT GGGDQKVRIW SMKSVEKNNA NNDSSQSLLA 60
TMRDHFGSVN CVRWARHGRY LASGSDDQVI LIHERKAGSG TAEFGSGEPA DVENWKVVMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCGATTGG AGATCTAAAA AAGGCCAAAA GGTGGATTAA ATTCCTGACA CGTCTTTGCC 60
TTTCCTTTGC ACTTTTCGTT TGAGTTCAAT TTTTCACTCG AATTCGGATT CGTGTTTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sita:101757891

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	81.64	0.00e+00	1670.00
IUUC-Aml-001723	Ailuropoda melanoleuca	42.45	6.00e-83	301.00
IUUC-Atr-003132	Amborella trichopoda	68.76	0.00e+00	1367.00
IUUC-Ago-007766	Ashbya gossypii	30.52	5.00e-63	235.00
IUUC-Ate-010530	Aspergillus terreus	29.75	3.00e-55	209.00
IUUC-Bta-013320	Bos taurus	37.95	1.00e-83	304.00
IUUC-Bci-013795	Botrytis cinerea	32.18	5.00e-70	259.00
IUUC-Cel-018692	Caenorhabditis elegans	28.39	4.00e-45	176.00
IUUC-Cfa-020132	Canis familiaris	42.01	4.00e-83	302.00
IUUC-Cpo-021484	Cavia porcellus	42.60	6.00e-87	315.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	37.60	5.00e-74	272.00
IUUC-Csa-023081	Chlorocebus sabaeus	37.77	2.00e-87	316.00
IUUC-Csv-026154	Ciona savignyi	38.28	2.00e-85	310.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	31.38	1.00e-66	248.00
IUUC-Cne-026891	Cryptococcus neoformans	37.76	7.00e-80	291.00
IUUC-Dno-029557	Dasypus novemcinctus	43.43	6.00e-72	265.00
IUUC-Dor-030687	Dipodomys ordii	36.22	1.00e-66	247.00
IUUC-Dme-031746	Drosophila melanogaster	36.70	2.00e-88	320.00
IUUC-Fca-036121	Felis catus	42.56	1.00e-84	307.00
IUUC-Fso-038409	Fusarium solani	26.32	2.00e-89	323.00
IUUC-Gmo-039151	Gadus morhua	39.79	2.00e-82	300.00
IUUC-Ggr-040016	Gaeumannomyces graminis	35.58	3.00e-69	256.00
IUUC-Gac-041405	Gasterosteus aculeatus	41.36	9.00e-81	294.00
IUUC-Ggo-045430	Gorilla gorilla	37.77	2.00e-87	317.00
IUUC-Hsa-046442	Homo sapiens	37.77	2.00e-87	316.00
IUUC-Hvu-047587	Hordeum vulgare	84.95	0.00e+00	1614.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	42.72	2.00e-64	238.00
IUUC-Kpa-049145	Komagataella pastoris	31.28	3.00e-58	219.00
IUUC-Laf-053718	Loxodonta africana	38.32	2.00e-88	320.00
IUUC-Mcc-055621	Macaca mulatta	37.04	5.00e-76	278.00
IUUC-Mla-058914	Melampsora laricipopulina	27.30	3.00e-81	295.00
IUUC-Mvi-060432	Microbotryum violaceum	33.50	2.00e-59	224.00
IUUC-Mmr-060871	Microcebus murinus	37.92	4.00e-89	322.00
IUUC-Mac-064768	Musa acuminata	72.37	0.00e+00	1404.00
IUUC-Mlu-067542	Myotis lucifugus	37.40	6.00e-84	305.00
IUUC-Opr-070808	Ochotona princeps	42.59	4.00e-55	209.00
IUUC-Ont-072105	Oreochromis niloticus	37.05	4.00e-83	302.00
IUUC-Ocu-074962	Oryctolagus cuniculus	37.12	4.00e-83	302.00
IUUC-Olo-081048	Oryza longistaminata	86.17	0.00e+00	724.00
IUUC-Oar-089229	Ovis aries	33.80	2.00e-67	250.00
IUUC-Ptr-090715	Pan troglodytes	37.77	2.00e-87	316.00
IUUC-Pan-092318	Papio anubis	37.35	2.00e-83	303.00
IUUC-Pfo-096857	Poecilia formosa	41.12	6.00e-79	288.00
IUUC-Pab-098047	Pongo abelii	37.77	2.00e-87	317.00
IUUC-Pop-099587	Populus trichocarpa	71.28	0.00e+00	1371.00
IUUC-Pva-102683	Pteropus vampyrus	37.33	7.00e-85	308.00
IUUC-Pte-104209	Pyrenophora teres	34.35	3.00e-70	259.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	34.35	2.00e-69	256.00
IUUC-Sce-106291	Saccharomyces cerevisiae	34.46	1.00e-63	237.00
IUUC-Sha-107514	Sarcophilus harrisii	35.83	4.00e-72	265.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	34.06	5.00e-71	261.00
IUUC-Spo-108162	Schizosaccharomyces pombe	36.90	2.00e-74	273.00
IUUC-Smo-109186	Selaginella moellendorffii	51.02	0.00e+00	919.00
IUUC-Sly-111547	Solanum lycopersicum	68.38	0.00e+00	1337.00
IUUC-Stu-112705	Solanum tuberosum	69.83	0.00e+00	1323.00
IUUC-Sbi-114272	Sorghum bicolor	91.38	0.00e+00	1759.00
IUUC-Ssc-116364	Sus scrofa	37.07	1.00e-83	303.00
IUUC-Tsy-119212	Tarsius syrichta	42.56	5.00e-71	262.00
IUUC-Tca-121765	Theobroma cacao	71.33	0.00e+00	1398.00
IUUC-Tre-121887	Trichoderma reesei	26.78	3.00e-86	313.00
IUUC-Tvi-122262	Trichoderma virens	26.54	2.00e-85	310.00
IUUC-Tae-123009	Triticum aestivum	68.95	0.00e+00	1141.00
IUUC-Tur-126483	Triticum urartu	84.20	0.00e+00	1693.00
IUUC-Tbe-127350	Tupaia belangeri	38.91	3.00e-50	192.00
IUUC-Uma-129465	Ustilago maydis	34.88	2.00e-73	270.00
IUUC-Xma-134139	Xiphophorus maculatus	39.83	9.00e-69	254.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence