iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099099

Ensembl Protein ID

POPTR_0006s18020.1

UniProt Accession

B9N316; B9N316_POPTR

Genbank Protein ID

ERP59585.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_580503; POPTR_0006s18020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s18020	POPTR_0006s18020.1	POPTR_0006s18020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-12	48.3	281	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           H+++v+ l f  sd  +l sG+  g++ vW l+tg++
   Q: 281  HSAEVNVL-FfsSDgAYLYSGGKEGVLVVWQLDTGRK 316
           88889999.4598899******************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIRGGRSYVL SPPAFSNDAK RLLVCTANSV TIFSTATGLP VLSLDGHTAL VTAVIVVPAS 60
TPASKILCYC WTASLDGTIR YWDFSVPELI KIINVNLPII SMVIPSLLSQ TAETNDKSPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTGCAGG ACAGTCTTCA ATTTCTAAAC TCCCCTCCCC TCCCCCCTCT CTCTCGATCG 60
ATTTTATCTT CCTTATATCA TCAAACTCTG AAAATGATTA GAGGCGGTAG AAGCTACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

pop:POPTR_0006s18020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001159	Aegilops tauschii	46.91	0.00e+00	633.00
IUUC-Aml-001772	Ailuropoda melanoleuca	26.02	2.00e-42	167.00
IUUC-Atr-003057	Amborella trichopoda	56.70	0.00e+00	860.00
IUUC-Aca-004528	Anolis carolinensis	27.02	5.00e-53	202.00
IUUC-Afu-009094	Aspergillus fumigatus	42.05	5.00e-16	79.00
IUUC-Ame-011596	Astyanax mexicanus	24.64	2.00e-51	197.00
IUUC-Bta-013087	Bos taurus	25.51	6.00e-44	172.00
IUUC-Bdi-014281	Brachypodium distachyon	53.25	0.00e+00	808.00
IUUC-Cja-019291	Callithrix jacchus	26.61	7.00e-44	171.00
IUUC-Cfa-020826	Canis familiaris	26.02	6.00e-44	172.00
IUUC-Cpo-022075	Cavia porcellus	25.48	5.00e-46	179.00
IUUC-Csa-023922	Chlorocebus sabaeus	26.21	1.00e-47	184.00
IUUC-Cin-025661	Ciona intestinalis	25.40	7.00e-23	101.00
IUUC-Csv-025929	Ciona savignyi	35.00	4.00e-10	57.80
IUUC-Cne-026862	Cryptococcus neoformans	23.23	7.00e-25	109.00
IUUC-Cme-027187	Cyanidioschyzon merolae	33.33	6.00e-08	53.10
IUUC-Dre-028194	Danio rerio	24.85	2.00e-48	186.00
IUUC-Dno-029393	Dasypus novemcinctus	25.88	1.00e-36	147.00
IUUC-Dme-031625	Drosophila melanogaster	22.30	6.00e-22	99.40
IUUC-Ete-033185	Echinops telfairi	27.70	3.00e-41	162.00
IUUC-Eca-034192	Equus caballus	26.04	2.00e-44	173.00
IUUC-Eeu-034737	Erinaceus europaeus	34.94	7.00e-17	82.00
IUUC-Fca-036473	Felis catus	26.50	1.00e-46	181.00
IUUC-Fal-037083	Ficedula albicollis	24.35	1.00e-36	147.00
IUUC-Fso-038117	Fusarium solani	34.02	7.00e-13	69.30
IUUC-Gmo-038612	Gadus morhua	24.47	3.00e-44	172.00
IUUC-Gac-042628	Gasterosteus aculeatus	25.96	4.00e-54	206.00
IUUC-Gma-043929	Glycine max	62.01	0.00e+00	981.00
IUUC-Ggo-044723	Gorilla gorilla	25.92	1.00e-44	174.00
IUUC-Hsa-045976	Homo sapiens	25.92	2.00e-46	180.00
IUUC-Itr-048873	Ictidomys tridecemlineatus	24.72	1.00e-44	174.00
IUUC-Lch-049534	Latimeria chalumnae	24.30	1.00e-47	184.00
IUUC-Lpe-050961	Leersia perrieri	51.60	0.00e+00	800.00
IUUC-Loc-052545	Lepisosteus oculatus	24.30	2.00e-44	173.00
IUUC-Laf-053408	Loxodonta africana	26.35	2.00e-47	184.00
IUUC-Mcc-055400	Macaca mulatta	26.06	9.00e-47	181.00
IUUC-Mor-057047	Magnaporthe oryzae	36.36	1.00e-11	65.10
IUUC-Mtr-058588	Medicago truncatula	60.54	0.00e+00	936.00
IUUC-Mla-059102	Melampsora laricipopulina	24.10	8.00e-17	82.40
IUUC-Mga-059364	Meleagris gallopavo	25.45	3.00e-36	146.00
IUUC-Mmr-061240	Microcebus murinus	24.85	4.00e-46	179.00
IUUC-Mdo-062461	Monodelphis domestica	24.76	5.00e-50	192.00
IUUC-Mmu-063820	Mus musculus	25.00	5.00e-42	166.00
IUUC-Mac-064657	Musa acuminata	55.93	0.00e+00	858.00
IUUC-Mlu-067113	Myotis lucifugus	24.96	1.00e-35	144.00
IUUC-Ncr-068881	Neurospora crassa	21.98	1.00e-16	81.60
IUUC-Nle-069700	Nomascus leucogenys	25.09	8.00e-47	181.00
IUUC-Opr-070788	Ochotona princeps	27.18	1.00e-34	141.00
IUUC-Ont-071934	Oreochromis niloticus	24.76	2.00e-50	193.00
IUUC-Oba-075556	Oryza barthii	53.44	0.00e+00	722.00
IUUC-Obr-076321	Oryza brachyantha	52.21	0.00e+00	797.00
IUUC-Ogl-077721	Oryza glaberrima	53.13	0.00e+00	816.00
IUUC-Ogu-078969	Oryza glumaepatula	52.64	0.00e+00	810.00
IUUC-Oin-079774	Oryza indica	53.05	0.00e+00	814.00
IUUC-Olo-080797	Oryza longistaminata	48.19	2.00e-175	608.00
IUUC-Ome-081288	Oryza meridionalis	52.88	0.00e+00	812.00
IUUC-Oni-082679	Oryza nivara	53.25	0.00e+00	815.00
IUUC-Opu-083382	Oryza punctata	52.99	0.00e+00	817.00
IUUC-Oru-085008	Oryza rufipogon	52.88	0.00e+00	811.00
IUUC-Osa-086286	Oryza sativa	53.01	0.00e+00	813.00
IUUC-Ola-087159	Oryzias latipes	24.97	6.00e-46	178.00
IUUC-Oga-087932	Otolemur garnettii	26.63	2.00e-45	176.00
IUUC-Oar-090087	Ovis aries	25.18	2.00e-43	170.00
IUUC-Ptr-090836	Pan troglodytes	25.92	2.00e-46	180.00
IUUC-Pan-091703	Papio anubis	26.24	7.00e-43	168.00
IUUC-Psi-093289	Pelodiscus sinensis	27.05	7.00e-46	178.00
IUUC-Pma-094549	Petromyzon marinus	24.85	7.00e-36	145.00
IUUC-Pfo-096805	Poecilia formosa	25.03	9.00e-45	174.00
IUUC-Pab-098646	Pongo abelii	25.92	2.00e-46	180.00
IUUC-Pca-100866	Procavia capensis	24.31	2.00e-39	157.00
IUUC-Ppe-101421	Prunus persica	71.58	0.00e+00	803.00
IUUC-Pva-103237	Pteropus vampyrus	28.75	2.00e-19	90.50
IUUC-Pgr-103514	Puccinia graminis	26.15	6.00e-12	66.20
IUUC-Rno-105785	Rattus norvegicus	25.30	3.00e-44	173.00
IUUC-Sha-107623	Sarcophilus harrisii	24.64	7.00e-46	178.00
IUUC-Sit-110013	Setaria italica	51.16	0.00e+00	774.00
IUUC-Sly-111872	Solanum lycopersicum	62.89	0.00e+00	970.00
IUUC-Sbi-114792	Sorghum bicolor	53.48	0.00e+00	797.00
IUUC-Sre-114923	Sporisorium reilianum	26.02	7.00e-40	159.00
IUUC-Ssc-115517	Sus scrofa	26.87	7.00e-47	181.00
IUUC-Tgu-116868	Taeniopygia guttata	25.00	3.00e-39	156.00
IUUC-Tru-118503	Takifugu rubripes	24.12	1.00e-45	177.00
IUUC-Tsy-119349	Tarsius syrichta	26.43	9.00e-47	181.00
IUUC-Tni-120437	Tetraodon nigroviridis	24.34	3.00e-40	159.00
IUUC-Tca-121127	Theobroma cacao	71.78	0.00e+00	1170.00
IUUC-Tae-123418	Triticum aestivum	52.79	0.00e+00	817.00
IUUC-Tbe-127376	Tupaia belangeri	32.34	1.00e-16	80.90
IUUC-Ttr-128949	Tursiops truncatus	24.21	3.00e-39	156.00
IUUC-Uma-129522	Ustilago maydis	26.64	2.00e-43	170.00
IUUC-Vpa-130282	Vicugna pacos	25.41	3.00e-37	149.00
IUUC-Xtr-132078	Xenopus tropicalis	26.69	2.00e-38	154.00
IUUC-Xma-133958	Xiphophorus maculatus	25.30	4.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence