iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007256

Ensembl Protein ID

AT2G16405.1

UniProt Accession

Q0V845; Q0V845_ARATH

Genbank Protein ID

ABH04482.1; AEC06494.1

Protein Name

At2g16405; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

BT026375; CP002685

Gene Name

At2g16405

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G16405	AT2G16405.1	AT2G16405.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-24	83.6	214	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +vt+++f s+  +++s+s D+ti+vW+l++gv+++
   Q: 214  GHSKDVTDFDFsSNnQYIASSSLDKTIRVWELSRGVCIR 252
           8***********555*********************986 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEEKNGSSEV EIGEKDETKK QSKDLEFLSC MMQPKTADSD PHYIGIRRIL LHRKADSGVI 60
SRRYDWRCNG KGYVAYRNFI SKPRKWENLR TPSLLSSPGN SGRWLPSPSP LSHQFEAESF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAAAAAGA TGACATCCTA AAAAGAGAAT TTACATAAAA TAGAGGGTTT TATTGTAAGT 60
AACTCGCTAT CTTTCGGTTA TCTTCGGTTT GTAATTTTTC ATGATCTTCT TCGACTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ath:AT2G16405

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	53.85	2.00e-93	335.00
IUUC-Aml-001761	Ailuropoda melanoleuca	35.73	1.00e-52	199.00
IUUC-Atr-002577	Amborella trichopoda	65.13	0.00e+00	645.00
IUUC-Aca-004423	Anolis carolinensis	36.00	5.00e-51	194.00
IUUC-Aly-005453	Arabidopsis lyrata	97.30	0.00e+00	939.00
IUUC-Ame-010600	Astyanax mexicanus	34.85	4.00e-46	178.00
IUUC-Bta-013511	Bos taurus	35.73	1.00e-52	199.00
IUUC-Bdi-014322	Brachypodium distachyon	62.26	4.00e-153	533.00
IUUC-Bol-015992	Brassica oleracea	91.65	0.00e+00	868.00
IUUC-Bra-017399	Brassica rapa	92.95	0.00e+00	845.00
IUUC-Cja-019508	Callithrix jacchus	35.47	2.00e-52	199.00
IUUC-Cfa-020273	Canis familiaris	35.47	1.00e-52	200.00
IUUC-Cpo-022002	Cavia porcellus	35.73	2.00e-52	199.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	25.70	1.00e-14	74.30
IUUC-Csa-023862	Chlorocebus sabaeus	35.73	1.00e-52	200.00
IUUC-Cin-025687	Ciona intestinalis	37.84	2.00e-62	232.00
IUUC-Csv-025992	Ciona savignyi	36.91	6.00e-63	234.00
IUUC-Dre-028697	Danio rerio	34.48	7.00e-49	187.00
IUUC-Dno-029208	Dasypus novemcinctus	35.47	2.00e-52	199.00
IUUC-Dor-030316	Dipodomys ordii	38.55	4.00e-30	125.00
IUUC-Eca-033362	Equus caballus	31.11	2.00e-33	136.00
IUUC-Eeu-034599	Erinaceus europaeus	33.51	5.00e-25	108.00
IUUC-Fca-035874	Felis catus	35.73	2.00e-52	199.00
IUUC-Gmo-039176	Gadus morhua	37.50	3.00e-49	188.00
IUUC-Gac-041802	Gasterosteus aculeatus	35.73	7.00e-52	197.00
IUUC-Gma-043284	Glycine max	75.97	0.00e+00	708.00
IUUC-Ggo-045546	Gorilla gorilla	35.73	2.00e-52	199.00
IUUC-Hsa-046407	Homo sapiens	35.73	2.00e-52	199.00
IUUC-Hvu-047726	Hordeum vulgare	61.00	4.00e-147	513.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	35.73	1.00e-52	199.00
IUUC-Lpe-051374	Leersia perrieri	61.22	2.00e-153	535.00
IUUC-Loc-052403	Lepisosteus oculatus	32.09	2.00e-45	176.00
IUUC-Laf-053721	Loxodonta africana	35.73	1.00e-52	199.00
IUUC-Mcc-055449	Macaca mulatta	35.73	2.00e-52	199.00
IUUC-Meu-056487	Macropus eugenii	35.47	7.00e-50	191.00
IUUC-Mtr-058659	Medicago truncatula	69.84	0.00e+00	684.00
IUUC-Mmr-061406	Microcebus murinus	35.73	2.00e-52	198.00
IUUC-Mdo-062331	Monodelphis domestica	34.99	2.00e-44	173.00
IUUC-Mmu-064001	Mus musculus	35.47	5.00e-52	197.00
IUUC-Mac-064934	Musa acuminata	69.64	0.00e+00	654.00
IUUC-Mpu-065871	Mustela putorius furo	35.73	1.00e-52	199.00
IUUC-Mlu-067463	Myotis lucifugus	36.00	8.00e-52	197.00
IUUC-Nle-070136	Nomascus leucogenys	35.73	8.00e-53	200.00
IUUC-Opr-070913	Ochotona princeps	38.11	2.00e-49	189.00
IUUC-Ont-071347	Oreochromis niloticus	35.20	5.00e-51	194.00
IUUC-Oan-073527	Ornithorhynchus anatinus	31.84	2.00e-43	169.00
IUUC-Ocu-074829	Oryctolagus cuniculus	34.46	1.00e-47	183.00
IUUC-Oba-075666	Oryza barthii	62.61	2.00e-155	541.00
IUUC-Obr-076413	Oryza brachyantha	62.39	2.00e-151	527.00
IUUC-Ogl-076998	Oryza glaberrima	63.70	4.00e-155	540.00
IUUC-Ogu-078287	Oryza glumaepatula	62.83	5.00e-156	543.00
IUUC-Oin-079359	Oryza indica	62.39	3.00e-155	540.00
IUUC-Olo-080438	Oryza longistaminata	67.23	2.00e-92	331.00
IUUC-Ome-081328	Oryza meridionalis	62.61	9.00e-159	552.00
IUUC-Oni-082574	Oryza nivara	62.61	2.00e-155	541.00
IUUC-Opu-083376	Oryza punctata	57.74	2.00e-139	488.00
IUUC-Oru-085162	Oryza rufipogon	62.26	7.00e-151	526.00
IUUC-Osa-085507	Oryza sativa	62.26	7.00e-151	526.00
IUUC-Ola-087387	Oryzias latipes	34.13	1.00e-46	180.00
IUUC-Oga-088694	Otolemur garnettii	35.73	2.00e-52	199.00
IUUC-Oar-090355	Ovis aries	35.73	1.00e-52	199.00
IUUC-Ptr-091488	Pan troglodytes	31.75	1.00e-29	123.00
IUUC-Pan-092516	Papio anubis	35.73	9.00e-53	200.00
IUUC-Pma-094572	Petromyzon marinus	35.04	3.00e-57	215.00
IUUC-Ppa-096003	Physcomitrella patens	53.80	2.00e-128	451.00
IUUC-Pfo-096819	Poecilia formosa	37.80	4.00e-48	185.00
IUUC-Pab-098373	Pongo abelii	35.66	6.00e-52	197.00
IUUC-Pop-099930	Populus trichocarpa	77.61	0.00e+00	731.00
IUUC-Pca-100248	Procavia capensis	35.47	6.00e-50	191.00
IUUC-Ppe-101592	Prunus persica	73.20	0.00e+00	680.00
IUUC-Pva-102971	Pteropus vampyrus	36.00	2.00e-52	199.00
IUUC-Rno-105386	Rattus norvegicus	35.66	1.00e-51	196.00
IUUC-Sha-107418	Sarcophilus harrisii	35.47	2.00e-49	189.00
IUUC-Smo-108859	Selaginella moellendorffii	51.32	2.00e-127	448.00
IUUC-Sit-109987	Setaria italica	62.98	2.00e-160	557.00
IUUC-Sly-111433	Solanum lycopersicum	78.12	1.00e-155	541.00
IUUC-Stu-112677	Solanum tuberosum	72.06	0.00e+00	705.00
IUUC-Sar-113317	Sorex araneus	33.94	2.00e-18	86.30
IUUC-Sbi-114115	Sorghum bicolor	60.26	5.00e-89	320.00
IUUC-Tru-118749	Takifugu rubripes	35.01	7.00e-50	190.00
IUUC-Tni-119685	Tetraodon nigroviridis	35.28	8.00e-50	190.00
IUUC-Tca-121769	Theobroma cacao	74.48	0.00e+00	724.00
IUUC-Tae-125563	Triticum aestivum	60.36	2.00e-92	331.00
IUUC-Tur-126403	Triticum urartu	54.70	1.00e-93	335.00
IUUC-Tbe-127245	Tupaia belangeri	37.04	5.00e-35	141.00
IUUC-Ttr-128854	Tursiops truncatus	35.73	6.00e-54	204.00
IUUC-Vvi-131113	Vitis vinifera	74.08	0.00e+00	686.00
IUUC-Xtr-132420	Xenopus tropicalis	31.58	1.00e-45	176.00
IUUC-Xma-134302	Xiphophorus maculatus	34.93	8.00e-51	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence