iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114115

Ensembl Protein ID

Sb03g036200.1

UniProt Accession

A0A1B6Q6F5; A0A1B6Q6F5_SORBI

Genbank Protein ID

KXG33495.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G314300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g036200	Sb03g036200.1	Sb03g036200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-12	46.5	214	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+  +t+++f s+  +++s+s D+t++vW++++g++++
   Q: 214  GHSKNITDFDFsSNnQYIASCSLDKTVRVWEISKGTCIR 252
           8***********555********************9986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEEMAPADSA TASSSSSSPE CSAAPSMPTD PDFLSCVLQP PTSSSSRPDA DYAALRRLLL 60
RRKPPSALQH RMEWRCNGKG YVAYRNFLLR RIDGGSAQST PSNSGRWAPS PVHATLSEAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGA TGGCTCCCGC CGACTCGGCC ACGGCCTCCT CCTCCTCCTC CTCCCCGGAG 60
TGCTCCGCCG CCCCTTCCAT GCCGACGGAC CCTGACTTCC TCAGCTGCGT CCTACAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	73.21	1.00e-109	388.00
IUUC-Aml-001761	Ailuropoda melanoleuca	37.35	2.00e-24	106.00
IUUC-Atr-002577	Amborella trichopoda	62.63	9.00e-104	370.00
IUUC-Aca-004423	Anolis carolinensis	37.35	5.00e-21	94.70
IUUC-Aly-005453	Arabidopsis lyrata	60.26	2.00e-92	332.00
IUUC-Ath-007256	Arabidopsis thaliana	60.26	6.00e-91	327.00
IUUC-Ame-010600	Astyanax mexicanus	37.35	8.00e-22	97.40
IUUC-Bta-013511	Bos taurus	37.35	2.00e-24	106.00
IUUC-Bdi-014322	Brachypodium distachyon	87.46	3.00e-138	484.00
IUUC-Bol-015992	Brassica oleracea	59.93	1.00e-91	329.00
IUUC-Bra-017399	Brassica rapa	60.61	4.00e-88	317.00
IUUC-Cja-019508	Callithrix jacchus	37.35	2.00e-24	106.00
IUUC-Cfa-020273	Canis familiaris	37.95	7.00e-25	107.00
IUUC-Cpo-022002	Cavia porcellus	37.35	2.00e-24	106.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	27.17	6.00e-12	64.70
IUUC-Csa-023862	Chlorocebus sabaeus	37.35	1.00e-24	106.00
IUUC-Cin-025687	Ciona intestinalis	38.15	3.00e-31	128.00
IUUC-Csv-025992	Ciona savignyi	38.15	2.00e-31	129.00
IUUC-Dre-028697	Danio rerio	37.35	9.00e-23	100.00
IUUC-Dno-029208	Dasypus novemcinctus	37.35	2.00e-24	105.00
IUUC-Eca-033362	Equus caballus	37.35	8.00e-25	107.00
IUUC-Eeu-034599	Erinaceus europaeus	37.67	1.00e-20	93.60
IUUC-Fca-035874	Felis catus	37.35	2.00e-24	106.00
IUUC-Gmo-039176	Gadus morhua	37.95	1.00e-23	103.00
IUUC-Gga-040458	Gallus gallus	37.19	2.00e-18	84.30
IUUC-Gac-041802	Gasterosteus aculeatus	39.76	1.00e-23	103.00
IUUC-Gma-043787	Glycine max	61.59	2.00e-97	348.00
IUUC-Ggo-045546	Gorilla gorilla	37.95	8.00e-25	107.00
IUUC-Hsa-046407	Homo sapiens	37.95	8.00e-25	107.00
IUUC-Hvu-047726	Hordeum vulgare	84.98	3.00e-123	434.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	37.35	2.00e-24	106.00
IUUC-Lpe-051374	Leersia perrieri	88.22	8.00e-141	492.00
IUUC-Loc-052403	Lepisosteus oculatus	37.95	1.00e-22	100.00
IUUC-Laf-053721	Loxodonta africana	37.35	2.00e-24	106.00
IUUC-Mcc-055449	Macaca mulatta	37.35	2.00e-24	106.00
IUUC-Meu-056487	Macropus eugenii	36.75	2.00e-20	93.20
IUUC-Mtr-058659	Medicago truncatula	55.72	8.00e-93	333.00
IUUC-Mmr-061406	Microcebus murinus	37.35	4.00e-24	104.00
IUUC-Mdo-062331	Monodelphis domestica	36.75	4.00e-21	95.90
IUUC-Mmu-064001	Mus musculus	37.35	2.00e-24	105.00
IUUC-Mac-064934	Musa acuminata	67.22	3.00e-108	384.00
IUUC-Mpu-065871	Mustela putorius furo	37.35	2.00e-24	106.00
IUUC-Mlu-067463	Myotis lucifugus	37.35	2.00e-23	102.00
IUUC-Nle-070136	Nomascus leucogenys	37.35	1.00e-24	107.00
IUUC-Opr-070913	Ochotona princeps	36.36	6.00e-22	97.80
IUUC-Ont-071347	Oreochromis niloticus	39.16	3.00e-23	102.00
IUUC-Oan-073527	Ornithorhynchus anatinus	37.35	6.00e-21	94.40
IUUC-Ocu-074829	Oryctolagus cuniculus	36.75	5.00e-24	104.00
IUUC-Oba-075666	Oryza barthii	86.20	1.00e-138	485.00
IUUC-Obr-076413	Oryza brachyantha	84.75	4.00e-137	480.00
IUUC-Ogl-076998	Oryza glaberrima	86.59	2.00e-132	464.00
IUUC-Ogu-078287	Oryza glumaepatula	86.20	2.00e-138	484.00
IUUC-Oin-079359	Oryza indica	85.86	2.00e-138	484.00
IUUC-Olo-080438	Oryza longistaminata	88.66	1.00e-98	352.00
IUUC-Ome-081328	Oryza meridionalis	85.08	8.00e-140	489.00
IUUC-Oni-082574	Oryza nivara	86.20	1.00e-138	485.00
IUUC-Opu-083376	Oryza punctata	83.22	3.00e-118	417.00
IUUC-Oru-085162	Oryza rufipogon	84.56	3.00e-131	460.00
IUUC-Osa-085507	Oryza sativa	84.56	3.00e-131	460.00
IUUC-Ola-087387	Oryzias latipes	36.75	2.00e-21	96.30
IUUC-Oga-088694	Otolemur garnettii	37.35	2.00e-24	106.00
IUUC-Oar-090355	Ovis aries	37.35	2.00e-24	106.00
IUUC-Ptr-091488	Pan troglodytes	37.95	3.00e-25	108.00
IUUC-Pan-092516	Papio anubis	37.35	2.00e-24	106.00
IUUC-Pma-094572	Petromyzon marinus	32.84	9.00e-25	107.00
IUUC-Ppa-096003	Physcomitrella patens	51.59	7.00e-55	207.00
IUUC-Pfo-096819	Poecilia formosa	40.12	2.00e-23	102.00
IUUC-Pab-098373	Pongo abelii	37.20	1.00e-24	107.00
IUUC-Pop-099930	Populus trichocarpa	64.43	1.00e-101	362.00
IUUC-Pca-100248	Procavia capensis	37.35	2.00e-24	105.00
IUUC-Ppe-101592	Prunus persica	62.96	1.00e-99	355.00
IUUC-Pva-102971	Pteropus vampyrus	37.35	2.00e-24	105.00
IUUC-Rno-105386	Rattus norvegicus	37.35	5.00e-24	104.00
IUUC-Sha-107418	Sarcophilus harrisii	36.75	1.00e-20	94.00
IUUC-Smo-108859	Selaginella moellendorffii	46.58	2.00e-61	228.00
IUUC-Sit-109987	Setaria italica	92.91	8.00e-154	535.00
IUUC-Sly-111433	Solanum lycopersicum	73.25	5.00e-68	249.00
IUUC-Stu-112677	Solanum tuberosum	63.25	9.00e-101	359.00
IUUC-Sar-113317	Sorex araneus	38.33	5.00e-19	88.20
IUUC-Ssc-115697	Sus scrofa	37.76	5.00e-16	77.40
IUUC-Tru-118749	Takifugu rubripes	38.55	5.00e-23	101.00
IUUC-Tni-119685	Tetraodon nigroviridis	39.16	3.00e-23	102.00
IUUC-Tca-121769	Theobroma cacao	60.73	2.00e-93	335.00
IUUC-Tae-125563	Triticum aestivum	91.76	5.00e-39	153.00
IUUC-Tur-126403	Triticum urartu	73.93	1.00e-110	392.00
IUUC-Ttr-128854	Tursiops truncatus	37.95	1.00e-24	107.00
IUUC-Vvi-131113	Vitis vinifera	65.44	6.00e-102	363.00
IUUC-Xtr-132420	Xenopus tropicalis	38.55	5.00e-25	107.00
IUUC-Xma-134302	Xiphophorus maculatus	38.55	5.00e-23	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence