iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118749

Ensembl Protein ID

ENSTRUP00000000471.1

UniProt Accession

H2RK08; H2RK08_TAKRU

Protein Name

Uncharacterized protein

Gene Name

wdr13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000000214.1	ENSTRUT00000000474.1	ENSTRUP00000000471.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-21	75.1	212	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++vt++a+  s++++vs s Dgt+++W++ +g++++
   Q: 212  GHGGPVTDFAWslSNDIIVSTSLDGTLRIWNTEDGRCIR 250
           8***********987**********************87 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MAAVWQQVLA VDARYNAYRT PTFPQFRTQY IRRRSQLLRE NAKCGFEPGL RRQYLRLRSQ 60
LLAQRYGPLS EQSSFRASSV RSSRTTLDRM EDFEEDPRAQ GARGHRRSVS RGSYQLQAQM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCAG TTTGGCAGCA GGTTTTGGCA GTCGACGCAA GGTGAGACTC CAGATAGCAC 60
AATAATGGCC TTTAATGGCC TAAACTGAGG AAGAAGCTGC TGGAATCAGG TTTGACAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	35.47	5.00e-29	121.00
IUUC-Aml-001761	Ailuropoda melanoleuca	81.52	0.00e+00	730.00
IUUC-Atr-002577	Amborella trichopoda	39.27	8.00e-58	218.00
IUUC-Aca-004423	Anolis carolinensis	85.22	0.00e+00	819.00
IUUC-Aly-005453	Arabidopsis lyrata	37.88	2.00e-53	202.00
IUUC-Ath-007256	Arabidopsis thaliana	37.58	8.00e-53	201.00
IUUC-Ame-010600	Astyanax mexicanus	94.83	0.00e+00	803.00
IUUC-Bta-013511	Bos taurus	81.52	0.00e+00	730.00
IUUC-Bdi-014322	Brachypodium distachyon	39.94	1.00e-52	200.00
IUUC-Bol-015992	Brassica oleracea	38.48	2.00e-55	209.00
IUUC-Bra-017399	Brassica rapa	37.87	2.00e-55	209.00
IUUC-Cja-019508	Callithrix jacchus	81.72	0.00e+00	731.00
IUUC-Cfa-020273	Canis familiaris	81.52	0.00e+00	729.00
IUUC-Cpo-022002	Cavia porcellus	80.90	0.00e+00	729.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	29.45	2.00e-10	60.50
IUUC-Csa-023862	Chlorocebus sabaeus	81.40	0.00e+00	724.00
IUUC-Cin-025687	Ciona intestinalis	55.65	3.00e-153	534.00
IUUC-Csv-025992	Ciona savignyi	55.60	8.00e-155	540.00
IUUC-Dre-028697	Danio rerio	95.04	0.00e+00	811.00
IUUC-Dno-029208	Dasypus novemcinctus	81.52	0.00e+00	730.00
IUUC-Dor-030316	Dipodomys ordii	82.86	9.00e-93	333.00
IUUC-Eca-033362	Equus caballus	82.08	0.00e+00	628.00
IUUC-Eeu-034599	Erinaceus europaeus	66.99	8.00e-104	370.00
IUUC-Fca-035874	Felis catus	81.72	0.00e+00	733.00
IUUC-Gmo-039176	Gadus morhua	96.08	0.00e+00	826.00
IUUC-Gga-040458	Gallus gallus	62.99	7.00e-56	209.00
IUUC-Gac-041802	Gasterosteus aculeatus	96.90	0.00e+00	865.00
IUUC-Gma-043284	Glycine max	33.69	1.00e-53	203.00
IUUC-Ggo-045546	Gorilla gorilla	81.72	0.00e+00	732.00
IUUC-Hsa-046407	Homo sapiens	81.72	0.00e+00	732.00
IUUC-Hvu-047726	Hordeum vulgare	36.87	5.00e-48	184.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	81.52	0.00e+00	730.00
IUUC-Lpe-051374	Leersia perrieri	39.58	4.00e-53	202.00
IUUC-Loc-052403	Lepisosteus oculatus	84.71	0.00e+00	755.00
IUUC-Laf-053721	Loxodonta africana	81.31	0.00e+00	729.00
IUUC-Mcc-055449	Macaca mulatta	81.40	0.00e+00	724.00
IUUC-Meu-056487	Macropus eugenii	81.93	0.00e+00	790.00
IUUC-Mtr-058659	Medicago truncatula	33.70	7.00e-47	181.00
IUUC-Mmr-061406	Microcebus murinus	80.00	4.00e-177	613.00
IUUC-Mdo-062331	Monodelphis domestica	81.86	0.00e+00	755.00
IUUC-Mmu-064001	Mus musculus	81.52	0.00e+00	730.00
IUUC-Mac-064934	Musa acuminata	37.46	3.00e-51	196.00
IUUC-Mpu-065871	Mustela putorius furo	81.31	0.00e+00	729.00
IUUC-Mlu-067463	Myotis lucifugus	81.20	0.00e+00	723.00
IUUC-Nle-070136	Nomascus leucogenys	81.40	0.00e+00	724.00
IUUC-Opr-070913	Ochotona princeps	73.92	0.00e+00	634.00
IUUC-Ont-071347	Oreochromis niloticus	97.52	0.00e+00	909.00
IUUC-Oan-073527	Ornithorhynchus anatinus	75.63	9.00e-162	562.00
IUUC-Ocu-074829	Oryctolagus cuniculus	78.69	0.00e+00	693.00
IUUC-Oba-075666	Oryza barthii	39.27	3.00e-52	199.00
IUUC-Obr-076413	Oryza brachyantha	39.22	3.00e-52	199.00
IUUC-Ogl-076998	Oryza glaberrima	39.27	4.00e-52	198.00
IUUC-Ogu-078287	Oryza glumaepatula	39.58	8.00e-53	201.00
IUUC-Oin-079359	Oryza indica	39.27	4.00e-52	198.00
IUUC-Olo-080438	Oryza longistaminata	36.25	8.00e-28	117.00
IUUC-Ome-081328	Oryza meridionalis	39.58	3.00e-56	212.00
IUUC-Oni-082574	Oryza nivara	39.27	3.00e-52	199.00
IUUC-Opu-083376	Oryza punctata	36.65	6.00e-47	181.00
IUUC-Oru-085162	Oryza rufipogon	39.27	4.00e-52	198.00
IUUC-Osa-085507	Oryza sativa	39.27	4.00e-52	198.00
IUUC-Ola-087387	Oryzias latipes	93.39	0.00e+00	842.00
IUUC-Oga-088694	Otolemur garnettii	81.52	0.00e+00	730.00
IUUC-Oar-090355	Ovis aries	80.29	0.00e+00	711.00
IUUC-Ptr-091488	Pan troglodytes	79.79	4.00e-153	534.00
IUUC-Pan-092516	Papio anubis	81.40	0.00e+00	724.00
IUUC-Pma-094572	Petromyzon marinus	76.28	0.00e+00	742.00
IUUC-Ppa-096003	Physcomitrella patens	34.63	3.00e-40	159.00
IUUC-Pfo-096819	Poecilia formosa	92.04	0.00e+00	844.00
IUUC-Pab-098373	Pongo abelii	78.31	0.00e+00	709.00
IUUC-Pop-099930	Populus trichocarpa	39.52	3.00e-54	206.00
IUUC-Pca-100248	Procavia capensis	79.06	0.00e+00	710.00
IUUC-Ppe-101592	Prunus persica	37.95	2.00e-50	193.00
IUUC-Pva-102971	Pteropus vampyrus	81.11	0.00e+00	729.00
IUUC-Rno-105386	Rattus norvegicus	79.49	7.00e-176	609.00
IUUC-Sha-106520	Sarcophilus harrisii	80.08	0.00e+00	775.00
IUUC-Smo-108859	Selaginella moellendorffii	40.96	4.00e-60	225.00
IUUC-Sit-109987	Setaria italica	39.82	1.00e-52	200.00
IUUC-Sly-111433	Solanum lycopersicum	36.09	2.00e-51	196.00
IUUC-Stu-112677	Solanum tuberosum	35.34	2.00e-54	206.00
IUUC-Sar-113317	Sorex araneus	78.34	3.00e-116	412.00
IUUC-Sbi-114115	Sorghum bicolor	39.88	4.00e-23	101.00
IUUC-Ssc-115697	Sus scrofa	80.39	8.00e-109	386.00
IUUC-Tni-119685	Tetraodon nigroviridis	95.28	0.00e+00	840.00
IUUC-Tca-121769	Theobroma cacao	38.44	3.00e-53	202.00
IUUC-Tae-125563	Triticum aestivum	35.82	2.00e-34	139.00
IUUC-Tur-126403	Triticum urartu	35.47	7.00e-28	117.00
IUUC-Tbe-127245	Tupaia belangeri	82.45	1.00e-105	377.00
IUUC-Ttr-128854	Tursiops truncatus	81.52	0.00e+00	756.00
IUUC-Vvi-131113	Vitis vinifera	37.35	1.00e-51	197.00
IUUC-Xtr-132420	Xenopus tropicalis	80.58	0.00e+00	692.00
IUUC-Xma-134302	Xiphophorus maculatus	96.49	0.00e+00	901.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence