iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000079440.5	ENSDART00000148590.2	ENSDARP00000124519.1
ENSDARG00000079440.5	ENSDART00000084530.5	ENSDARP00000078965.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-18	64.9	80	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH++ v ++++   +d++++s+s D ++++W++ +g l
   Q: 80   GHQGNVLDIKWnpfHDNIIASCSEDSSVRIWEIPDGGL 117
           8************988****************999876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSWRPTYRSS KFRNVYGKVA NREHCFEGIP ITKNVHDNHF CAVNAKFLAI VTESAGGGSF 60
VVIPVTQFGR IDPHYPKVCG HQGNVLDIKW NPFHDNIIAS CSEDSSVRIW EIPDGGLRRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCACTGC AGTATCCAGA CTATACAGGA CCACGGCTGC TGCGCCACTG ATAGGCTCAG 60
ATACTTAAAG AGAGACAGCG ACCAGACCCT CCCTCTCTCT CTCTCTCTGT TTCACAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027339--CORO2B
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0016020--C:membrane
GO:0051015--F:actin filament binding
GO:0030036--P:actin cytoskeleton organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002018	Ailuropoda melanoleuca	81.47	0.00e+00	838.00
IUUC-Apl-003786	Anas platyrhynchos	81.51	0.00e+00	852.00
IUUC-Aca-004750	Anolis carolinensis	85.81	0.00e+00	861.00
IUUC-Ame-011201	Astyanax mexicanus	76.77	0.00e+00	769.00
IUUC-Bta-012392	Bos taurus	86.99	0.00e+00	817.00
IUUC-Cja-019618	Callithrix jacchus	87.15	0.00e+00	741.00
IUUC-Cfa-020090	Canis familiaris	87.31	0.00e+00	872.00
IUUC-Cpo-021875	Cavia porcellus	87.10	0.00e+00	871.00
IUUC-Csa-023813	Chlorocebus sabaeus	87.53	0.00e+00	874.00
IUUC-Dno-029558	Dasypus novemcinctus	87.31	0.00e+00	872.00
IUUC-Dor-031144	Dipodomys ordii	85.96	0.00e+00	841.00
IUUC-Ete-032835	Echinops telfairi	78.70	0.00e+00	721.00
IUUC-Eca-033620	Equus caballus	87.53	0.00e+00	872.00
IUUC-Fca-035729	Felis catus	87.31	0.00e+00	871.00
IUUC-Fal-037197	Ficedula albicollis	86.02	0.00e+00	864.00
IUUC-Gmo-039540	Gadus morhua	86.45	0.00e+00	839.00
IUUC-Gga-040455	Gallus gallus	88.17	0.00e+00	876.00
IUUC-Gac-042218	Gasterosteus aculeatus	87.53	0.00e+00	872.00
IUUC-Ggo-044922	Gorilla gorilla	87.31	0.00e+00	872.00
IUUC-Hsa-045750	Homo sapiens	87.31	0.00e+00	872.00
IUUC-Itr-048866	Ictidomys tridecemlineatus	87.31	0.00e+00	872.00
IUUC-Kpa-049089	Komagataella pastoris	42.68	1.00e-92	333.00
IUUC-Lch-049567	Latimeria chalumnae	79.88	0.00e+00	845.00
IUUC-Loc-052145	Lepisosteus oculatus	91.22	0.00e+00	836.00
IUUC-Laf-054013	Loxodonta africana	86.88	0.00e+00	868.00
IUUC-Mcc-055230	Macaca mulatta	84.09	0.00e+00	863.00
IUUC-Meu-056208	Macropus eugenii	77.88	1.00e-141	496.00
IUUC-Mga-059825	Meleagris gallopavo	82.39	0.00e+00	848.00
IUUC-Mmr-060944	Microcebus murinus	87.53	0.00e+00	872.00
IUUC-Mdo-061845	Monodelphis domestica	81.91	0.00e+00	842.00
IUUC-Mmu-064197	Mus musculus	87.31	0.00e+00	872.00
IUUC-Mpu-065993	Mustela putorius furo	87.74	0.00e+00	873.00
IUUC-Mlu-067427	Myotis lucifugus	80.55	0.00e+00	800.00
IUUC-Nle-069666	Nomascus leucogenys	86.97	0.00e+00	743.00
IUUC-Opr-070358	Ochotona princeps	87.10	0.00e+00	867.00
IUUC-Ont-072071	Oreochromis niloticus	88.39	0.00e+00	853.00
IUUC-Oan-073064	Ornithorhynchus anatinus	83.30	0.00e+00	843.00
IUUC-Ocu-074888	Oryctolagus cuniculus	86.47	0.00e+00	738.00
IUUC-Ola-086733	Oryzias latipes	81.26	0.00e+00	865.00
IUUC-Oga-088842	Otolemur garnettii	87.10	0.00e+00	870.00
IUUC-Oar-089753	Ovis aries	87.74	0.00e+00	873.00
IUUC-Ptr-090933	Pan troglodytes	87.10	0.00e+00	866.00
IUUC-Pan-092127	Papio anubis	86.97	0.00e+00	744.00
IUUC-Psi-092947	Pelodiscus sinensis	86.45	0.00e+00	869.00
IUUC-Pma-094375	Petromyzon marinus	73.33	6.00e-133	466.00
IUUC-Pfo-096261	Poecilia formosa	88.00	0.00e+00	745.00
IUUC-Pab-098546	Pongo abelii	87.73	0.00e+00	816.00
IUUC-Pca-100133	Procavia capensis	87.50	1.00e-156	546.00
IUUC-Pva-102257	Pteropus vampyrus	86.90	0.00e+00	742.00
IUUC-Rno-105827	Rattus norvegicus	87.10	0.00e+00	871.00
IUUC-Sha-106730	Sarcophilus harrisii	87.96	0.00e+00	873.00
IUUC-Ssc-115774	Sus scrofa	83.78	0.00e+00	862.00
IUUC-Tru-117702	Takifugu rubripes	79.41	0.00e+00	840.00
IUUC-Tni-120573	Tetraodon nigroviridis	81.67	0.00e+00	853.00
IUUC-Tbe-127746	Tupaia belangeri	76.94	1.00e-176	612.00
IUUC-Ttr-128935	Tursiops truncatus	87.96	0.00e+00	808.00
IUUC-Xtr-132098	Xenopus tropicalis	83.23	0.00e+00	830.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence