iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000001847.1	ENSORLT00000002302.1	ENSORLP00000002301.1
ENSORLG00000001847.1	ENSORLT00000002303.1	ENSORLP00000002302.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-16	60.7	80	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH++ v ++++    +++++s+s D +++vW++
   Q: 80   GHQGNVLDIKWnpfFENIIASCSEDTSVRVWEI 112
           8**********9875589*************96 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSWRPTYRSS KFRNVYGKVA NREHCFDGIP ITKNVHDNHF CAVNSKFLAV VTESAGGGSF 60
IVVPISQYGR LDSHQPKVCG HQGNVLDIKW NPFFENIIAS CSEDTSVRVW EIPDSGLRRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAGGTGGA AAAGACACTA AAAATGCCAT CTCTGCCAGA AGCGGTTCAC CAATGAATGA 60
GCATCCTTGT AGAGAAAACT CAAAGCAGAC GAGGCTCCTC ACTGTCCCTC GGGCCACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027339--CORO2B
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane
GO:0030036--P:actin cytoskeleton organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002018	Ailuropoda melanoleuca	73.17	0.00e+00	811.00
IUUC-Apl-003786	Anas platyrhynchos	72.97	0.00e+00	833.00
IUUC-Aca-004750	Anolis carolinensis	76.79	0.00e+00	845.00
IUUC-Ame-011201	Astyanax mexicanus	68.09	0.00e+00	746.00
IUUC-Bta-012392	Bos taurus	86.37	0.00e+00	813.00
IUUC-Cja-019618	Callithrix jacchus	77.51	0.00e+00	728.00
IUUC-Cfa-020090	Canis familiaris	77.95	0.00e+00	855.00
IUUC-Cpo-021875	Cavia porcellus	77.95	0.00e+00	853.00
IUUC-Csa-023813	Chlorocebus sabaeus	78.72	0.00e+00	862.00
IUUC-Dre-028472	Danio rerio	81.26	0.00e+00	865.00
IUUC-Dno-029558	Dasypus novemcinctus	77.73	0.00e+00	851.00
IUUC-Dor-031144	Dipodomys ordii	77.11	0.00e+00	818.00
IUUC-Ete-032835	Echinops telfairi	77.55	0.00e+00	723.00
IUUC-Eca-033620	Equus caballus	78.34	0.00e+00	857.00
IUUC-Fca-035729	Felis catus	78.53	0.00e+00	860.00
IUUC-Fal-037197	Ficedula albicollis	76.60	0.00e+00	850.00
IUUC-Gmo-039540	Gadus morhua	83.20	0.00e+00	876.00
IUUC-Gga-040455	Gallus gallus	78.72	0.00e+00	863.00
IUUC-Gac-042218	Gasterosteus aculeatus	86.68	0.00e+00	926.00
IUUC-Ggo-044922	Gorilla gorilla	78.72	0.00e+00	861.00
IUUC-Hsa-045750	Homo sapiens	78.72	0.00e+00	861.00
IUUC-Itr-048866	Ictidomys tridecemlineatus	78.53	0.00e+00	858.00
IUUC-Lch-049567	Latimeria chalumnae	72.63	0.00e+00	842.00
IUUC-Loc-052145	Lepisosteus oculatus	88.91	0.00e+00	831.00
IUUC-Laf-054013	Loxodonta africana	78.32	0.00e+00	852.00
IUUC-Mcc-055230	Macaca mulatta	75.93	0.00e+00	848.00
IUUC-Meu-056208	Macropus eugenii	78.21	1.00e-144	505.00
IUUC-Mga-059825	Meleagris gallopavo	73.81	0.00e+00	833.00
IUUC-Mmr-060944	Microcebus murinus	78.92	0.00e+00	861.00
IUUC-Mdo-061845	Monodelphis domestica	73.90	0.00e+00	828.00
IUUC-Mmu-064197	Mus musculus	78.34	0.00e+00	858.00
IUUC-Mpu-065993	Mustela putorius furo	78.53	0.00e+00	858.00
IUUC-Mlu-067427	Myotis lucifugus	79.07	0.00e+00	797.00
IUUC-Nle-069666	Nomascus leucogenys	77.38	0.00e+00	730.00
IUUC-Opr-070358	Ochotona princeps	78.14	0.00e+00	853.00
IUUC-Ont-072071	Oreochromis niloticus	87.26	0.00e+00	902.00
IUUC-Oan-073064	Ornithorhynchus anatinus	75.23	0.00e+00	829.00
IUUC-Ocu-074888	Oryctolagus cuniculus	77.38	0.00e+00	729.00
IUUC-Oga-088842	Otolemur garnettii	78.72	0.00e+00	859.00
IUUC-Oar-089753	Ovis aries	78.53	0.00e+00	858.00
IUUC-Ptr-090933	Pan troglodytes	78.72	0.00e+00	855.00
IUUC-Pan-092127	Papio anubis	77.38	0.00e+00	729.00
IUUC-Psi-092947	Pelodiscus sinensis	78.53	0.00e+00	862.00
IUUC-Pma-094375	Petromyzon marinus	74.04	2.00e-133	468.00
IUUC-Pfo-096261	Poecilia formosa	85.21	0.00e+00	786.00
IUUC-Pab-098546	Pongo abelii	86.57	0.00e+00	816.00
IUUC-Pca-100133	Procavia capensis	86.46	1.00e-156	545.00
IUUC-Pva-102257	Pteropus vampyrus	76.84	0.00e+00	726.00
IUUC-Rno-105827	Rattus norvegicus	78.14	0.00e+00	857.00
IUUC-Sha-106730	Sarcophilus harrisii	79.11	0.00e+00	863.00
IUUC-Ssc-115774	Sus scrofa	75.32	0.00e+00	846.00
IUUC-Tru-117702	Takifugu rubripes	77.40	0.00e+00	874.00
IUUC-Tni-120573	Tetraodon nigroviridis	79.96	0.00e+00	894.00
IUUC-Tbe-127746	Tupaia belangeri	75.65	6.00e-176	609.00
IUUC-Ttr-128935	Tursiops truncatus	86.11	0.00e+00	805.00
IUUC-Xtr-132098	Xenopus tropicalis	73.89	0.00e+00	810.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence