iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oar-089469

Ensembl Protein ID

ENSOARP00000016285.1

UniProt Accession

W5Q0P9; W5Q0P9_SHEEP

Genbank Protein ID

ENSOARP00000016285

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AMGL01100850

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOARG00000015178.1	ENSOART00000016519.1	ENSOARP00000016285.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	34.8	136	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s + + +CP+Cr
   Q: 136  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKSANTCPTCR 181
           ********55553322255788*********9......44599********8 PP

Organism

Ovis aries

Protein Sequence
(Fasta)

FFPGNPQRKR RGGTVNSRQA QKRTRETTSP PEMALEAEPI ELVESAGDEI VDLTCESLEP 60
VVVDLTHNDS VVFVEERRRP RRNGRRLRQD HADSCVVSSD EEELARDKDV YVTTHSPRSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCCCTG GAAACCCTCA GAGAAAGCGT CGTGGTGGGA CAGTAAACTC TAGACAAGCC 60
CAGAAGCGAA CTCGGGAAAC CACCTCCCCA CCTGAGATGG CCTTGGAGGC AGAACCTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	40.00	5.00e-11	61.20
IUUC-Aml-002206	Ailuropoda melanoleuca	90.58	2.00e-85	307.00
IUUC-Atr-002771	Amborella trichopoda	34.25	3.00e-10	58.50
IUUC-Apl-004120	Anas platyrhynchos	71.35	1.00e-71	262.00
IUUC-Aca-004236	Anolis carolinensis	62.43	6.00e-60	223.00
IUUC-Ame-011555	Astyanax mexicanus	52.50	2.00e-37	148.00
IUUC-Bta-012913	Bos taurus	94.12	4.00e-90	323.00
IUUC-Bdi-014655	Brachypodium distachyon	43.33	5.00e-11	61.20
IUUC-Bol-016418	Brassica oleracea	37.70	9.00e-09	54.30
IUUC-Bra-016890	Brassica rapa	36.84	2.00e-07	48.90
IUUC-Cja-019151	Callithrix jacchus	85.11	2.00e-77	281.00
IUUC-Cfa-020868	Canis familiaris	87.63	5.00e-82	296.00
IUUC-Cpo-022249	Cavia porcellus	84.54	4.00e-76	276.00
IUUC-Csa-024125	Chlorocebus sabaeus	86.10	2.00e-80	291.00
IUUC-Cin-025749	Ciona intestinalis	42.62	3.00e-14	71.60
IUUC-Csv-026318	Ciona savignyi	39.73	3.00e-14	71.60
IUUC-Dre-028145	Danio rerio	43.18	3.00e-33	134.00
IUUC-Dno-029605	Dasypus novemcinctus	87.70	4.00e-87	313.00
IUUC-Dor-030898	Dipodomys ordii	87.70	4.00e-84	303.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	5.00e-11	61.60
IUUC-Ete-032694	Echinops telfairi	81.28	2.00e-69	254.00
IUUC-Eca-033443	Equus caballus	90.91	3.00e-83	300.00
IUUC-Eeu-034603	Erinaceus europaeus	88.35	5.00e-53	198.00
IUUC-Fca-035507	Felis catus	90.37	3.00e-80	290.00
IUUC-Fal-037382	Ficedula albicollis	70.31	1.00e-65	242.00
IUUC-Gmo-038960	Gadus morhua	71.43	7.00e-19	85.50
IUUC-Gga-040493	Gallus gallus	66.67	5.00e-67	246.00
IUUC-Gac-042194	Gasterosteus aculeatus	48.47	1.00e-36	145.00
IUUC-Gma-042666	Glycine max	38.33	1.00e-08	52.80
IUUC-Ggo-044726	Gorilla gorilla	87.70	3.00e-81	293.00
IUUC-Hsa-046212	Homo sapiens	87.70	3.00e-81	293.00
IUUC-Hvu-047337	Hordeum vulgare	35.44	4.00e-11	62.00
IUUC-Itr-047892	Ictidomys tridecemlineatus	87.30	1.00e-80	291.00
IUUC-Lpe-050920	Leersia perrieri	38.33	1.00e-10	59.70
IUUC-Loc-051907	Lepisosteus oculatus	46.24	1.00e-35	142.00
IUUC-Laf-054145	Loxodonta africana	87.11	1.00e-80	291.00
IUUC-Mcc-055689	Macaca mulatta	86.63	3.00e-80	290.00
IUUC-Meu-056654	Macropus eugenii	46.52	2.00e-39	154.00
IUUC-Mtr-058314	Medicago truncatula	43.64	1.00e-10	58.90
IUUC-Mla-058874	Melampsora laricipopulina	30.00	3.00e-05	43.50
IUUC-Mga-059303	Meleagris gallopavo	70.16	1.00e-70	258.00
IUUC-Mmr-061355	Microcebus murinus	88.24	4.00e-81	293.00
IUUC-Mdo-062968	Monodelphis domestica	65.79	2.00e-65	241.00
IUUC-Mmu-064421	Mus musculus	88.95	3.00e-91	327.00
IUUC-Mac-064573	Musa acuminata	30.69	4.00e-12	65.50
IUUC-Mpu-066522	Mustela putorius furo	89.12	2.00e-85	307.00
IUUC-Mlu-067065	Myotis lucifugus	86.77	2.00e-80	291.00
IUUC-Nle-069198	Nomascus leucogenys	86.63	6.00e-80	289.00
IUUC-Opr-071141	Ochotona princeps	86.63	4.00e-85	306.00
IUUC-Oan-073341	Ornithorhynchus anatinus	66.43	5.00e-36	143.00
IUUC-Ocu-073787	Oryctolagus cuniculus	89.36	4.00e-91	327.00
IUUC-Oba-075460	Oryza barthii	40.32	2.00e-11	62.40
IUUC-Obr-076349	Oryza brachyantha	38.33	3.00e-10	58.90
IUUC-Ogl-077094	Oryza glaberrima	35.44	1.00e-11	62.80
IUUC-Ogu-078677	Oryza glumaepatula	40.32	2.00e-11	62.80
IUUC-Oin-079992	Oryza indica	35.44	1.00e-11	62.80
IUUC-Olo-080257	Oryza longistaminata	41.94	1.00e-11	63.20
IUUC-Ome-081943	Oryza meridionalis	35.44	1.00e-11	63.50
IUUC-Oni-082671	Oryza nivara	40.32	2.00e-11	62.40
IUUC-Opu-083644	Oryza punctata	40.32	2.00e-11	62.40
IUUC-Oru-084650	Oryza rufipogon	40.32	2.00e-11	62.40
IUUC-Osa-086110	Oryza sativa	35.44	1.00e-11	63.20
IUUC-Ola-086970	Oryzias latipes	43.22	6.00e-35	140.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	6.00e-10	57.00
IUUC-Oga-088242	Otolemur garnettii	88.83	2.00e-90	324.00
IUUC-Ptr-091254	Pan troglodytes	81.82	4.00e-74	270.00
IUUC-Pan-092919	Papio anubis	86.70	7.00e-81	292.00
IUUC-Psi-093929	Pelodiscus sinensis	69.95	5.00e-69	253.00
IUUC-Pma-094118	Petromyzon marinus	50.00	7.00e-21	91.30
IUUC-Ppa-095567	Physcomitrella patens	45.90	1.00e-11	63.50
IUUC-Pfo-097412	Poecilia formosa	47.83	2.00e-34	138.00
IUUC-Pab-098424	Pongo abelii	88.24	9.00e-82	295.00
IUUC-Pop-098917	Populus trichocarpa	40.85	3.00e-09	55.50
IUUC-Pca-100463	Procavia capensis	84.78	2.00e-48	184.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-09	54.70
IUUC-Pva-102594	Pteropus vampyrus	88.41	6.00e-59	219.00
IUUC-Rno-105460	Rattus norvegicus	86.46	5.00e-80	289.00
IUUC-Sha-107487	Sarcophilus harrisii	70.10	2.00e-68	251.00
IUUC-Smo-108908	Selaginella moellendorffii	37.10	3.00e-08	51.60
IUUC-Sit-109959	Setaria italica	34.43	1.00e-04	40.40
IUUC-Stu-112694	Solanum tuberosum	39.06	1.00e-09	56.60
IUUC-Sar-113601	Sorex araneus	85.56	5.00e-76	276.00
IUUC-Sbi-114398	Sorghum bicolor	36.67	6.00e-05	40.80
IUUC-Ssc-115911	Sus scrofa	90.91	1.00e-82	298.00
IUUC-Tgu-117264	Taeniopygia guttata	70.53	1.00e-63	235.00
IUUC-Tru-117663	Takifugu rubripes	51.57	3.00e-38	150.00
IUUC-Tsy-118883	Tarsius syrichta	82.43	8.00e-63	232.00
IUUC-Tae-124035	Triticum aestivum	40.00	4.00e-11	61.60
IUUC-Tur-126408	Triticum urartu	40.00	4.00e-11	61.60
IUUC-Ttr-128950	Tursiops truncatus	66.84	1.00e-65	242.00
IUUC-Vvi-130833	Vitis vinifera	40.32	2.00e-10	59.30
IUUC-Xtr-132879	Xenopus tropicalis	53.75	8.00e-38	149.00
IUUC-Xma-133319	Xiphophorus maculatus	46.94	7.00e-32	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence