iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088830

Ensembl Protein ID

ENSOGAP00000009527.2

UniProt Accession

H0X352; H0X352_OTOGA

Genbank Protein ID

ENSOGAP00000009527

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03148690

Gene Name

TRIM4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000010646.2	ENSOGAT00000010649.2	ENSOGAP00000009527.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-08	33.6	12	53
E3 activity/RING/U-box	2.60e-07	30.6	7	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ f+d p++  CgH f++ Cl   w     +ss +f+CP Cr
   Q: 12   CSICLDYFED-PVSIECGHNFCRACLrRSW----AQSSCSFSCPECR 53
           **********.***************999*....99**********8 PP

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIek.wlasggk.tcPvtrqplteedlvPnltlrrliqa 67
            ee+ C+I l+ ++dPv +++G+ + r+++++ w +s+ + +cP +rqp  +  l Pn +l rl ++
   Q: 7    REELTCSICLDYFEDPVSIECGHNFCRACLRRsWAQSSCSfSCPECRQPSGPGALRPNWALARLTDR 73
           5899**************************98466665558*******************9988776 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MEAEDLREEL TCSICLDYFE DPVSIECGHN FCRACLRRSW AQSSCSFSCP ECRQPSGPGA 60
LRPNWALARL TDRTRRRCQL PVPSGLCRHH REPLRLFCED DQRPVCLVCR ESQEHQAHVM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCCG AGGACCTCCG GGAGGAACTG ACCTGCTCCA TCTGCCTGGA CTATTTTGAG 60
GACCCGGTGT CCATCGAATG CGGCCACAAC TTCTGCCGCG CCTGCTTGCG CCGCAGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding
GO:0070206--P:protein trimerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002308	Ailuropoda melanoleuca	58.14	9.00e-132	463.00
IUUC-Cja-019204	Callithrix jacchus	62.87	6.00e-169	587.00
IUUC-Cfa-021283	Canis familiaris	65.68	2.00e-170	591.00
IUUC-Csa-023476	Chlorocebus sabaeus	69.26	2.00e-176	612.00
IUUC-Cho-024657	Choloepus hoffmanni	59.49	5.00e-139	487.00
IUUC-Eca-033740	Equus caballus	65.41	3.00e-118	418.00
IUUC-Hsa-046707	Homo sapiens	66.07	1.00e-174	605.00
IUUC-Mcc-055643	Macaca mulatta	66.73	6.00e-173	600.00
IUUC-Mmr-061318	Microcebus murinus	74.32	0.00e+00	682.00
IUUC-Mpu-066377	Mustela putorius furo	65.26	1.00e-161	562.00
IUUC-Mlu-067319	Myotis lucifugus	63.48	5.00e-112	397.00
IUUC-Nle-069382	Nomascus leucogenys	65.51	7.00e-109	387.00
IUUC-Opr-070278	Ochotona princeps	61.60	3.00e-161	561.00
IUUC-Oar-089188	Ovis aries	64.00	1.00e-163	568.00
IUUC-Pan-092332	Papio anubis	66.20	3.00e-172	598.00
IUUC-Ppa-095897	Physcomitrella patens	48.15	5.00e-10	58.50
IUUC-Pab-097648	Pongo abelii	69.89	7.00e-179	619.00
IUUC-Pva-102131	Pteropus vampyrus	63.45	2.00e-164	572.00
IUUC-Ssc-116309	Sus scrofa	58.45	1.00e-142	499.00
IUUC-Tsy-119365	Tarsius syrichta	61.56	1.00e-88	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence