iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105786

Ensembl Protein ID

ENSRNOP00000001813.6

UniProt Accession

F1LWI8; F1LWI8_RAT

Genbank Protein ID

ENSRNOP00000001813

Protein Name

WD repeat domain 66

Genbank Nucleotide ID

AC123330

Gene Name

Wdr66

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000001342.8	ENSRNOT00000001813.6	ENSRNOP00000001813.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-08	35.6	654	682

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
           d v++++  +  +l+++Gs  g ikvWD+
   Q: 654  DAVHAISChPYqPLIAVGSVCGIIKVWDF 682
           5677777775568***************6 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSDKEEKPLA ESRESGDMDK EEEGEEEEEE EEYNPSFEED RLQQSLTEGT LSWEESQEDG 60
EGLEGKWIEK EEQIEGKEVR GEEEEMRGKE EREERWEEEE TGEEEKSEEK EGSKEKGGEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAACCAGAA CTGTTTCTGC CCGTTTCGAC GTGTTAGCAC ATCAGGAAGC TGGCATAGGA 60
AACAGAGGGG CCTGCTGAAT TTATGTCAAA TTTTCTGTAG AGGAAACTAC AGAAGAATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011992--EF-hand-dom_pair
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002305	Ailuropoda melanoleuca	76.92	0.00e+00	1583.00
IUUC-Apl-003833	Anas platyrhynchos	53.59	0.00e+00	945.00
IUUC-Ame-011318	Astyanax mexicanus	47.73	0.00e+00	850.00
IUUC-Bta-013319	Bos taurus	80.15	0.00e+00	1560.00
IUUC-Cja-019874	Callithrix jacchus	77.30	0.00e+00	1594.00
IUUC-Cfa-021224	Canis familiaris	79.89	0.00e+00	1582.00
IUUC-Cpo-022038	Cavia porcellus	68.83	0.00e+00	1296.00
IUUC-Cre-022950	Chlamydomonas reinhardtii	27.05	5.00e-55	209.00
IUUC-Csa-024266	Chlorocebus sabaeus	78.39	0.00e+00	1507.00
IUUC-Cin-025361	Ciona intestinalis	43.40	0.00e+00	784.00
IUUC-Csv-026051	Ciona savignyi	42.42	0.00e+00	761.00
IUUC-Dre-028130	Danio rerio	43.30	0.00e+00	842.00
IUUC-Dno-029069	Dasypus novemcinctus	75.04	0.00e+00	1074.00
IUUC-Ete-032698	Echinops telfairi	70.39	0.00e+00	691.00
IUUC-Eca-033728	Equus caballus	79.03	0.00e+00	1558.00
IUUC-Eeu-034707	Erinaceus europaeus	81.07	5.00e-138	485.00
IUUC-Fca-035974	Felis catus	77.51	0.00e+00	1544.00
IUUC-Fal-037073	Ficedula albicollis	50.88	0.00e+00	926.00
IUUC-Gmo-039607	Gadus morhua	47.72	2.00e-143	503.00
IUUC-Gga-040440	Gallus gallus	52.81	0.00e+00	947.00
IUUC-Gac-042234	Gasterosteus aculeatus	43.48	0.00e+00	759.00
IUUC-Ggo-044473	Gorilla gorilla	84.82	0.00e+00	1020.00
IUUC-Hsa-046770	Homo sapiens	78.32	0.00e+00	1611.00
IUUC-Itr-049034	Ictidomys tridecemlineatus	70.67	0.00e+00	1477.00
IUUC-Lch-049489	Latimeria chalumnae	48.83	0.00e+00	872.00
IUUC-Loc-052793	Lepisosteus oculatus	51.63	0.00e+00	982.00
IUUC-Laf-054246	Loxodonta africana	75.36	0.00e+00	705.00
IUUC-Mcc-054827	Macaca mulatta	75.48	0.00e+00	1538.00
IUUC-Meu-056344	Macropus eugenii	61.24	0.00e+00	858.00
IUUC-Mga-059830	Meleagris gallopavo	52.38	0.00e+00	934.00
IUUC-Mmr-061157	Microcebus murinus	75.89	0.00e+00	1551.00
IUUC-Mdo-062870	Monodelphis domestica	64.48	0.00e+00	1278.00
IUUC-Mmu-064101	Mus musculus	86.20	0.00e+00	1754.00
IUUC-Mpu-066432	Mustela putorius furo	79.13	0.00e+00	1550.00
IUUC-Mlu-068011	Myotis lucifugus	70.76	0.00e+00	1410.00
IUUC-Nle-069572	Nomascus leucogenys	69.76	0.00e+00	1447.00
IUUC-Opr-070235	Ochotona princeps	76.86	0.00e+00	1422.00
IUUC-Oan-073735	Ornithorhynchus anatinus	63.41	0.00e+00	1227.00
IUUC-Ocu-074669	Oryctolagus cuniculus	75.44	0.00e+00	1453.00
IUUC-Oga-089007	Otolemur garnettii	78.28	0.00e+00	1587.00
IUUC-Ptr-091286	Pan troglodytes	78.12	0.00e+00	1608.00
IUUC-Pan-091905	Papio anubis	77.15	0.00e+00	1587.00
IUUC-Psi-093555	Pelodiscus sinensis	55.77	0.00e+00	1010.00
IUUC-Pma-094736	Petromyzon marinus	35.85	1.00e-179	623.00
IUUC-Pfo-097081	Poecilia formosa	43.23	0.00e+00	747.00
IUUC-Pab-097893	Pongo abelii	76.89	0.00e+00	1575.00
IUUC-Sha-107399	Sarcophilus harrisii	64.58	0.00e+00	1267.00
IUUC-Tgu-116796	Taeniopygia guttata	51.92	0.00e+00	964.00
IUUC-Tru-118592	Takifugu rubripes	42.62	0.00e+00	713.00
IUUC-Tni-120456	Tetraodon nigroviridis	39.37	0.00e+00	657.00
IUUC-Tbe-127411	Tupaia belangeri	67.66	3.00e-90	326.00
IUUC-Xtr-131990	Xenopus tropicalis	50.49	0.00e+00	959.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence