iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012858

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02058207

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000014742.5	ENSBTAT00000019617.5	ENSBTAP00000019617.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-08	33.6	391	425

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH   +  l+f  +  t+l ++s+D+ i +WD+ t
   Q: 391  GHRKAIATLCFspTHeTHLFTASYDKRIILWDIGT 425
           79999999****6447****************755 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAPLSTRLLI QRGRPKSNRL GKIRSLDLSG LNLLSEDLDH TLLGRLKQLQ ELDLSDNQLE 60
TLPADLGLPH LHVLHCANNQ LSDVTHLCQF PQLEELSLEG NPFLTVSDSL KVTFLLPELR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTCGCGCG GCGCCACCTC CTGGACTGAG GCAAGCGCTG GCGCCAGCAT CGGATTCCCG 60
TGCTGCGGTT TGGGCACACG CGGACGGCGC CTTCTCGCCA TGGCCCCCCT CTCGACGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	79.77	0.00e+00	648.00
IUUC-Cja-019702	Callithrix jacchus	79.66	0.00e+00	957.00
IUUC-Cfa-020910	Canis familiaris	81.64	0.00e+00	1022.00
IUUC-Cpo-022523	Cavia porcellus	77.30	0.00e+00	1003.00
IUUC-Csa-023359	Chlorocebus sabaeus	79.82	0.00e+00	990.00
IUUC-Dno-029426	Dasypus novemcinctus	80.86	0.00e+00	980.00
IUUC-Dor-030654	Dipodomys ordii	74.77	0.00e+00	776.00
IUUC-Eca-034035	Equus caballus	80.09	0.00e+00	993.00
IUUC-Eeu-034711	Erinaceus europaeus	75.72	9.00e-167	580.00
IUUC-Gmo-039096	Gadus morhua	40.52	1.00e-76	280.00
IUUC-Ggo-044714	Gorilla gorilla	79.04	0.00e+00	958.00
IUUC-Hsa-046826	Homo sapiens	79.35	0.00e+00	961.00
IUUC-Laf-054449	Loxodonta africana	80.25	0.00e+00	1001.00
IUUC-Mcc-055193	Macaca mulatta	80.43	0.00e+00	966.00
IUUC-Mmr-061572	Microcebus murinus	80.86	0.00e+00	1025.00
IUUC-Mmu-063240	Mus musculus	72.99	0.00e+00	896.00
IUUC-Mpu-066295	Mustela putorius furo	80.71	0.00e+00	1005.00
IUUC-Mlu-067766	Myotis lucifugus	80.89	0.00e+00	1028.00
IUUC-Nle-069200	Nomascus leucogenys	77.04	0.00e+00	889.00
IUUC-Ola-086965	Oryzias latipes	43.50	5.00e-90	325.00
IUUC-Oga-088411	Otolemur garnettii	75.00	0.00e+00	977.00
IUUC-Oar-089415	Ovis aries	93.83	0.00e+00	1113.00
IUUC-Ptr-090663	Pan troglodytes	79.20	0.00e+00	959.00
IUUC-Pan-092467	Papio anubis	79.51	0.00e+00	946.00
IUUC-Pab-098479	Pongo abelii	79.66	0.00e+00	962.00
IUUC-Pca-101023	Procavia capensis	69.44	0.00e+00	803.00
IUUC-Pva-102812	Pteropus vampyrus	77.93	0.00e+00	984.00
IUUC-Rno-105469	Rattus norvegicus	74.03	0.00e+00	924.00
IUUC-Ssc-115884	Sus scrofa	83.20	0.00e+00	1060.00
IUUC-Tbe-127247	Tupaia belangeri	81.44	5.00e-126	444.00
IUUC-Ttr-128723	Tursiops truncatus	82.43	0.00e+00	1032.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence