iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019702

UUCD1 version

UUC-CaJ-00725

Ensembl Protein ID

ENSCJAP00000029831.2

UniProt Accession

F7HKM2; F7HKM2_CALJA

Genbank Protein ID

JAB01775.1; JAB13568.1; JAB23249.1; JAB34044.1; JAB43589.1

Protein Name

Leucine-rich repeat and WD repeat-containing protein 1

Genbank Nucleotide ID

ACFV01133828; GAMS01009568; GAMR01010683; GAMQ01007807; GAMP01009166

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000016191.2	ENSCJAT00000031521.2	ENSCJAP00000029831.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-06	27.3	391	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+  +  l+f   ++t+l ++s+D+ i +WD
   Q: 391  HKKAIATLCFspaHETHLFTASYDKRIILWD 421
           888899999*98666**************** PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MGPLSARLLM QRGRPKSDRL GKIRSLDLSG LELLSEHLDP KLLCRLTQLQ ELDLSNNQLE 60
VLPDNLGLSH LRVLRCANNQ LGDVTALCQF PKLEELSLEG NPFLTVNDNL KVSFLLPKLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTCCGGTC GTTACCTCCC ACGGGCTCGT GCGGCGCCAC CTCCTGGGCT CGGATACAGC 60
GGACGCCAGA ACCGGGCTCC AGGAGACGCA GGGTGACTCC AGACGCCGGG GCCGCAGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

KEGG

cjc:100411126

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	84.30	0.00e+00	665.00
IUUC-Bta-012858	Bos taurus	79.66	0.00e+00	998.00
IUUC-Cfa-020910	Canis familiaris	87.69	0.00e+00	1073.00
IUUC-Cpo-022523	Cavia porcellus	82.21	0.00e+00	1070.00
IUUC-Csa-023359	Chlorocebus sabaeus	95.98	0.00e+00	1208.00
IUUC-Dno-029426	Dasypus novemcinctus	87.06	0.00e+00	1054.00
IUUC-Dor-030654	Dipodomys ordii	80.96	0.00e+00	822.00
IUUC-Eca-034035	Equus caballus	88.70	0.00e+00	1090.00
IUUC-Eeu-034711	Erinaceus europaeus	75.95	1.00e-168	586.00
IUUC-Gmo-039096	Gadus morhua	34.36	3.00e-106	379.00
IUUC-Ggo-044714	Gorilla gorilla	95.21	0.00e+00	1169.00
IUUC-Hsa-046826	Homo sapiens	95.21	0.00e+00	1168.00
IUUC-Laf-054449	Loxodonta africana	86.13	0.00e+00	1053.00
IUUC-Mcc-055193	Macaca mulatta	96.91	0.00e+00	1181.00
IUUC-Mmr-061572	Microcebus murinus	88.85	0.00e+00	1115.00
IUUC-Mmu-063240	Mus musculus	77.50	0.00e+00	949.00
IUUC-Mpu-066295	Mustela putorius furo	87.67	0.00e+00	1077.00
IUUC-Mlu-067766	Myotis lucifugus	87.23	0.00e+00	1088.00
IUUC-Nle-069200	Nomascus leucogenys	92.44	0.00e+00	1086.00
IUUC-Ola-086965	Oryzias latipes	41.73	5.00e-85	308.00
IUUC-Oga-088411	Otolemur garnettii	81.16	0.00e+00	1066.00
IUUC-Oar-089415	Ovis aries	81.05	0.00e+00	951.00
IUUC-Ptr-090663	Pan troglodytes	95.52	0.00e+00	1172.00
IUUC-Pan-092467	Papio anubis	94.61	0.00e+00	1142.00
IUUC-Pab-098479	Pongo abelii	95.52	0.00e+00	1170.00
IUUC-Pca-101023	Procavia capensis	75.39	0.00e+00	883.00
IUUC-Pva-102812	Pteropus vampyrus	83.44	0.00e+00	1046.00
IUUC-Rno-105469	Rattus norvegicus	78.36	0.00e+00	976.00
IUUC-Ssc-115884	Sus scrofa	87.52	0.00e+00	1088.00
IUUC-Tbe-127247	Tupaia belangeri	88.24	2.00e-136	479.00
IUUC-Ttr-128723	Tursiops truncatus	85.91	0.00e+00	1065.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence