iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000016382.3	ENSOCUT00000023009.1	ENSOCUP00000024388.1
ENSOCUG00000016382.3	ENSOCUT00000016389.3	ENSOCUP00000014086.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-18	63.9	1563	1603
UBD/Beta-Prp	1.50e-43	149.1	1661	1797

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtl...lvsGsdDgtikvWDlrtgvll 36
           gHt++v+cl     s+     l +Gs D+ti+++ ++t  ++
   Q: 1563 GHTSKVNCLLVtqtSG-KnaaLYTGSSDHTIRCYHVKTRECV 1603
           8*******95587533.24579*************9998886 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
              ++ll++gs+d ti v d+++g llr+l+gh++++ ++k  +d  +  +gs+D+ ++  ++ tg+ v+++kgh++ v+ +++   
   Q: 1661 EGARKLLVVGSYDCTISVRDARNGLLLRTLEGHSKTILCMKVVND--LVFSGSSDQSVHAHNIHTGELVRIYKGHNHAVTVVNILG- 1744
           445689***************************************..9*************************************9. PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvr 162
            +++v++  d+ +rv++l++   l+ +  gh+++++c+++h+  +++ +G++D+ ++
   Q: 1745 -KVMVTACLDKFVRVYELQSHDRLQ-VYGGHKDMIMCMTIHK--SMIYTGCYDGSIQ 1797
           .************************.****************..**********997 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MPVGRIECPS SPSFPRDSSH ECRVCGVTEV GLSAYAKHIS GQLHKDKVDA QEREDDGKEE 60
EEEEDYFDKE LVQLIKQRKE QSRQDEPSNS SQEINSDDRR PQRRREDRIP YQDRESYSQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAGTGG GGAGAATTGA ATGTCCCTCA TCTCCCTCTT TCCCTAGGGA TAGTAGTCAT 60
GAGTGCCGAG TGTGCGGGGT CACAGAAGTG GGTCTTTCTG CATATGCGAA GCACATTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00400--WD40

SMART

SM00320--WD40
SM00355--ZnF_C2H2

Gene Ontology

GO:0046872--F:metal ion binding
GO:0003723--F:RNA binding

KEGG

ocu:100342651

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001928	Ailuropoda melanoleuca	85.14	0.00e+00	3012.00
IUUC-Apl-003674	Anas platyrhynchos	57.48	0.00e+00	1712.00
IUUC-Aca-005018	Anolis carolinensis	53.40	0.00e+00	1603.00
IUUC-Ame-011431	Astyanax mexicanus	68.52	0.00e+00	683.00
IUUC-Bta-013436	Bos taurus	84.27	0.00e+00	2967.00
IUUC-Cfa-020278	Canis familiaris	83.55	0.00e+00	2442.00
IUUC-Cpo-022278	Cavia porcellus	78.82	0.00e+00	2697.00
IUUC-Csa-023115	Chlorocebus sabaeus	82.35	0.00e+00	1710.00
IUUC-Cho-024829	Choloepus hoffmanni	79.76	0.00e+00	2112.00
IUUC-Dre-028112	Danio rerio	65.39	0.00e+00	670.00
IUUC-Dno-029127	Dasypus novemcinctus	84.28	0.00e+00	2890.00
IUUC-Dor-030367	Dipodomys ordii	80.26	0.00e+00	1191.00
IUUC-Ete-032500	Echinops telfairi	70.93	0.00e+00	1212.00
IUUC-Eca-034319	Equus caballus	86.22	0.00e+00	2968.00
IUUC-Eeu-034754	Erinaceus europaeus	74.71	0.00e+00	2307.00
IUUC-Fca-036181	Felis catus	85.46	0.00e+00	2944.00
IUUC-Fal-036865	Ficedula albicollis	54.65	0.00e+00	1555.00
IUUC-Gmo-039227	Gadus morhua	64.24	4.00e-175	608.00
IUUC-Gga-041178	Gallus gallus	57.27	0.00e+00	1755.00
IUUC-Gac-042209	Gasterosteus aculeatus	64.32	1.00e-166	580.00
IUUC-Ggo-044636	Gorilla gorilla	85.26	0.00e+00	2985.00
IUUC-Hsa-045949	Homo sapiens	86.62	0.00e+00	3049.00
IUUC-Itr-048628	Ictidomys tridecemlineatus	85.94	0.00e+00	3002.00
IUUC-Lch-049753	Latimeria chalumnae	50.36	0.00e+00	1404.00
IUUC-Loc-052333	Lepisosteus oculatus	69.37	0.00e+00	729.00
IUUC-Laf-053530	Loxodonta africana	82.16	0.00e+00	2883.00
IUUC-Mcc-054664	Macaca mulatta	86.36	0.00e+00	3003.00
IUUC-Meu-056609	Macropus eugenii	74.21	0.00e+00	1052.00
IUUC-Mga-059632	Meleagris gallopavo	57.77	0.00e+00	1729.00
IUUC-Mmr-060742	Microcebus murinus	85.93	0.00e+00	2990.00
IUUC-Mdo-061831	Monodelphis domestica	78.87	0.00e+00	1319.00
IUUC-Mmu-064055	Mus musculus	75.44	0.00e+00	2485.00
IUUC-Mpu-066458	Mustela putorius furo	90.95	0.00e+00	1557.00
IUUC-Mlu-067767	Myotis lucifugus	82.89	0.00e+00	2869.00
IUUC-Nle-069728	Nomascus leucogenys	86.36	0.00e+00	3036.00
IUUC-Opr-070914	Ochotona princeps	83.91	0.00e+00	2950.00
IUUC-Ont-072353	Oreochromis niloticus	68.20	0.00e+00	644.00
IUUC-Ola-087573	Oryzias latipes	68.23	3.00e-162	565.00
IUUC-Oga-088664	Otolemur garnettii	87.50	0.00e+00	1826.00
IUUC-Oar-090256	Ovis aries	81.49	0.00e+00	2282.00
IUUC-Ptr-090884	Pan troglodytes	85.47	0.00e+00	2593.00
IUUC-Pan-091779	Papio anubis	82.35	0.00e+00	1711.00
IUUC-Psi-093267	Pelodiscus sinensis	92.73	7.00e-165	572.00
IUUC-Pma-094414	Petromyzon marinus	44.52	2.00e-60	227.00
IUUC-Pfo-097009	Poecilia formosa	64.23	5.00e-159	555.00
IUUC-Pca-100820	Procavia capensis	76.47	0.00e+00	2096.00
IUUC-Pva-103044	Pteropus vampyrus	77.19	0.00e+00	1121.00
IUUC-Rno-105960	Rattus norvegicus	70.13	0.00e+00	2262.00
IUUC-Sar-113018	Sorex araneus	73.96	0.00e+00	1290.00
IUUC-Ssc-115278	Sus scrofa	84.96	0.00e+00	2999.00
IUUC-Tgu-117231	Taeniopygia guttata	55.38	0.00e+00	1617.00
IUUC-Tru-118472	Takifugu rubripes	55.73	9.00e-165	575.00
IUUC-Tsy-118877	Tarsius syrichta	80.75	0.00e+00	1993.00
IUUC-Tni-119881	Tetraodon nigroviridis	56.67	3.00e-177	616.00
IUUC-Tbe-127499	Tupaia belangeri	76.74	0.00e+00	1539.00
IUUC-Ttr-128962	Tursiops truncatus	85.82	0.00e+00	2994.00
IUUC-Vpa-130089	Vicugna pacos	80.75	0.00e+00	1332.00
IUUC-Xtr-132940	Xenopus tropicalis	45.21	0.00e+00	1271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence