iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058779

Ensembl Protein ID

AES60954

UniProt Accession

G7I2L6; A0A0C3UPB7; G7I2L6_MEDTR

Genbank Protein ID

AES60954.2

Protein Name

Pre-mRNA splicing factor

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g072740

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g072740	AES60954	AES60954

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-24	85.7	335	371

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f +d t ++s+++D++ik WD+ tg +
   Q: 335  GHSKAVRDICFtNDgTKFLSAGYDKNIKYWDTETGQV 371
           8***********999*****************99976 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDLLNQYTDN NNDPDSPSQN PNSPENSPPR LLPSRSAAPK VDDTMLALTV ADPKTLSKPI 60
DPTQHLIAFN PTYDQLWAPI QGPSHPYAKD GLAQGMRNHK LGFVEDANIE PFLFDEQHNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAATCTCA CTCAATATTC CTTTCCCTTC TTCAATTAAC ACATTCACAA CAATGGATCT 60
ACTCAACCAA TACACCGACA ACAACAACGA TCCAGACTCA CCATCTCAAA ACCCTAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

mtr:MTR_1g072740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002243	Ailuropoda melanoleuca	45.21	3.00e-97	348.00
IUUC-Aca-005200	Anolis carolinensis	69.81	5.00e-68	248.00
IUUC-Ani-009323	Aspergillus nidulans	41.72	3.00e-105	374.00
IUUC-Csv-025868	Ciona savignyi	67.39	7.00e-37	144.00
IUUC-Oru-084807	Oryza rufipogon	70.47	0.00e+00	733.00
IUUC-Pab-097838	Pongo abelii	48.44	6.00e-130	457.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	51.62	2.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence