iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108778

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377609

Gene Name

SELMODRAFT_444442

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_444442	EFJ18617	EFJ18617

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-25	88.8	297	334
UBD/Beta-Prp	3.40e-45	155.2	246	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+ ++f +d   ++s s+D +ik+WD+ tg+++
   Q: 297  GHSATVRHVSFtNDgLKFLSVSYDTKIKLWDTETGKVI 334
           8***********99888*****************9976 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
            c+ht+ gh+ +v++++f+p +g+ l+sGs+d  +++wd+++ ++c++ t +gh+++v++v++  dg  + s s+D++++lWd +tgk++  +t g+t++v
   Q: 246  RCIHTWVGHKGNVMTIQFFPkYGHLLLSGSSDHQVKIWDVHNhRKCVR-TYKGHSATVRHVSFTNDGLKFLSVSYDTKIKLWDTETGKVISSFTTGKTPYV 345
           6*******************999****************987256666.********************************************999***** PP
   S: 184  yslsfdsngkelvsgs.ldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
            +l  d++++ ++ ++ +d++v  wd+ +g++ +++  h d v+ + f +n+ r+++ s+D+s+r+W 
   Q: 346  AKLHPDDDKQNVLMVAmKDKKVVQWDVDSGKITQEYDQHLDAVNTITFVDNNRRFITSSDDRSLRVWE 413
           ****999987777665279************************************************5 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEVSFNVGRC SAPDVPVAHG GAAAAESALA VVDPLQKRVT FNPRYEQMWA PMEGPIHPYN 60
KDGLSRGMKN HALGVVEDSS ISPFTFDEQY HTFQAFGYAA DTSAPNGANL IGDPDKIKDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGA GCTTCAATGT GGGGCGCTGC AGCGCGCCGG ACGTTCCCGT GGCGCACGGT 60
GGCGCCGCGG CGGCGGAGTC GGCGCTGGCG GTGGTGGATC CTCTCCAGAA GCGAGTGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

smo:SELMODRAFT_444442

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002243	Ailuropoda melanoleuca	42.05	6.00e-80	290.00
IUUC-Apl-003885	Anas platyrhynchos	44.98	4.00e-126	444.00
IUUC-Acl-008220	Aspergillus clavatus	39.49	5.00e-109	387.00
IUUC-Afl-008473	Aspergillus flavus	37.77	4.00e-104	371.00
IUUC-Afu-008773	Aspergillus fumigatus	40.77	4.00e-111	394.00
IUUC-Ani-009323	Aspergillus nidulans	37.09	1.00e-94	339.00
IUUC-Aor-009950	Aspergillus oryzae	37.77	4.00e-104	371.00
IUUC-Ate-010372	Aspergillus terreus	38.20	3.00e-109	388.00
IUUC-Ame-011660	Astyanax mexicanus	45.15	2.00e-128	452.00
IUUC-Bgr-012230	Blumeria graminis	39.04	5.00e-97	347.00
IUUC-Bci-013646	Botrytis cinerea	38.52	1.00e-96	346.00
IUUC-Cel-018535	Caenorhabditis elegans	39.21	1.00e-109	389.00
IUUC-Cja-019071	Callithrix jacchus	45.78	3.00e-128	451.00
IUUC-Cho-024676	Choloepus hoffmanni	42.96	2.00e-118	418.00
IUUC-Cin-025229	Ciona intestinalis	43.67	6.00e-126	443.00
IUUC-Csv-025868	Ciona savignyi	58.70	1.00e-29	120.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	43.50	3.00e-83	301.00
IUUC-Cne-026885	Cryptococcus neoformans	42.62	2.00e-112	399.00
IUUC-Dre-027631	Danio rerio	46.46	5.00e-134	470.00
IUUC-Dno-029815	Dasypus novemcinctus	43.31	6.00e-121	427.00
IUUC-Dor-030978	Dipodomys ordii	45.32	1.00e-109	389.00
IUUC-Dse-031520	Dothistroma septosporum	43.60	9.00e-85	306.00
IUUC-Dme-032050	Drosophila melanogaster	41.92	2.00e-129	455.00
IUUC-Ete-032866	Echinops telfairi	44.28	5.00e-123	434.00
IUUC-Eca-033384	Equus caballus	45.68	8.00e-129	453.00
IUUC-Eeu-034471	Erinaceus europaeus	38.13	3.00e-86	311.00
IUUC-Fal-036774	Ficedula albicollis	45.42	2.00e-130	458.00
IUUC-Fox-037951	Fusarium oxysporum	37.08	1.00e-96	346.00
IUUC-Fso-038287	Fusarium solani	48.57	2.00e-95	342.00
IUUC-Ggr-039764	Gaeumannomyces graminis	36.25	4.00e-92	331.00
IUUC-Gga-040293	Gallus gallus	45.40	1.00e-128	452.00
IUUC-Ggo-044864	Gorilla gorilla	45.78	1.00e-128	452.00
IUUC-Hsa-046602	Homo sapiens	45.78	1.00e-128	452.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	47.86	4.00e-112	397.00
IUUC-Kpa-049318	Komagataella pastoris	48.82	5.00e-84	304.00
IUUC-Loc-052467	Lepisosteus oculatus	45.52	3.00e-132	464.00
IUUC-Lma-053107	Leptosphaeria maculans	46.31	2.00e-93	335.00
IUUC-Laf-053787	Loxodonta africana	45.23	1.00e-127	449.00
IUUC-Mcc-055706	Macaca mulatta	45.78	2.00e-128	451.00
IUUC-Meu-056757	Macropus eugenii	49.13	3.00e-93	335.00
IUUC-Mor-057079	Magnaporthe oryzae	45.21	2.00e-92	332.00
IUUC-Mpo-057533	Magnaporthe poae	46.61	9.00e-92	330.00
IUUC-Mtr-057950	Medicago truncatula	60.11	0.00e+00	639.00
IUUC-Mla-058910	Melampsora laricipopulina	38.05	2.00e-109	389.00
IUUC-Mga-059366	Meleagris gallopavo	45.40	2.00e-128	451.00
IUUC-Mvi-060349	Microbotryum violaceum	49.29	1.00e-100	360.00
IUUC-Mmr-061209	Microcebus murinus	45.78	5.00e-130	457.00
IUUC-Mdo-062118	Monodelphis domestica	45.59	2.00e-131	461.00
IUUC-Mmu-063173	Mus musculus	45.78	1.00e-128	452.00
IUUC-Nfi-068334	Neosartorya fischeri	39.53	1.00e-110	393.00
IUUC-Ncr-068675	Neurospora crassa	44.44	1.00e-83	303.00
IUUC-Nle-070113	Nomascus leucogenys	45.78	1.00e-128	452.00
IUUC-Opr-070685	Ochotona princeps	51.31	1.00e-113	402.00
IUUC-Oan-073573	Ornithorhynchus anatinus	45.25	6.00e-118	416.00
IUUC-Olu-087627	Ostreococcus lucimarinus	46.05	2.00e-131	462.00
IUUC-Oar-089390	Ovis aries	45.59	1.00e-127	449.00
IUUC-Ptr-090894	Pan troglodytes	45.78	1.00e-128	452.00
IUUC-Pan-092476	Papio anubis	45.78	2.00e-128	451.00
IUUC-Pfo-096139	Poecilia formosa	45.62	5.00e-130	457.00
IUUC-Pab-097838	Pongo abelii	45.16	8.00e-108	383.00
IUUC-Pva-102418	Pteropus vampyrus	45.40	8.00e-128	449.00
IUUC-Pte-104386	Pyrenophora teres	47.03	2.00e-92	332.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	46.86	6.00e-92	330.00
IUUC-Rno-105694	Rattus norvegicus	45.03	3.00e-122	431.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.24	1.00e-68	252.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	36.36	3.00e-97	348.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	38.12	2.00e-86	312.00
IUUC-Sar-113065	Sorex araneus	29.97	8.00e-25	107.00
IUUC-Ssc-115760	Sus scrofa	45.59	6.00e-128	450.00
IUUC-Tgu-116493	Taeniopygia guttata	44.86	1.00e-131	462.00
IUUC-Tru-118489	Takifugu rubripes	44.27	4.00e-132	464.00
IUUC-Tsy-119332	Tarsius syrichta	45.78	4.00e-130	457.00
IUUC-Tni-120202	Tetraodon nigroviridis	43.99	8.00e-126	443.00
IUUC-Tre-122162	Trichoderma reesei	48.22	7.00e-99	353.00
IUUC-Tvi-122500	Trichoderma virens	47.40	6.00e-98	350.00
IUUC-Tbe-127968	Tupaia belangeri	42.43	4.00e-115	407.00
IUUC-Vpa-130617	Vicugna pacos	44.86	1.00e-122	432.00
IUUC-Vvi-131238	Vitis vinifera	60.29	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence