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Tag Content
UUCD2 ID IUUC-Xtr-131987
UUCD1 version UUC-XeT-00342
Ensembl Protein ID ENSXETP00000019381.3
UniProt Accession F6VLN2; F6VLN2_XENTR
Genbank Protein ID ENSXETP00000019381
Protein Name Damage-specific DNA-binding protein 1
Genbank Nucleotide ID AAMC01072441
Gene Name ddb1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000008820.3 ENSXETT00000019381.3 ENSXETP00000019381.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DDB1 0 1759.0 1 1144
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DDB1

   S: 2    mldrYvvtarkpsavvklvvgnftshkelNLliaksnrieiflvtpeglrpvvevklegsiavlrlfrpknekkdllfilteryntl 88
    m+++Yvvta+kp+av+++v+g+fts+++lNLliak++r+ei++vtpeglrpv+ev ++g+iav++lfrpk+e+kdllfilt++yn++
   Q: 1 MSYNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNAC 87
    799************************************************************************************ PP
   S: 89 ilelrdidessevvtradgevlDdigrssdsGlinviepkirlialelyqglfklIvldndikelkafnirleelnvsdvkflillt 175
    ile+++ ++s++++tra+g+v+D+igr+s++G+i++i+p++r+i+l+ly+glfk+I+l++d+kelkafnirleel+v+dvkfl+ ++
   Q: 88 ILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLEELHVIDVKFLYSCQ 174
    *************************************************************************************** PP
   S: 176 qptgrvlviyqdddgkhlktyelslkdKeFvkis.kqesiekeaellipvpsqlvgvlvlgeesivyksadnykdvdPylirqstai 261
    +pt ++++yqd++g+h+ktye+sl++KeF k++ kqe++e+ea+++i+vp++++g++++g+esi+y+++d+y +++P++i+qst++
   Q: 175 APT--ICFVYQDPQGRHVKTYEVSLREKEFSKGPwKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIV 259
    ***..********************************************************************************** PP
   S: 262 ryervdnngirylLgdfdGelkllllsaeeemsG.vevkslkielLgeisiaesisyldngllfvgsrfgdsQlvklisestgkgsy 347
    +++rvd ng+rylLgd++G+l++lll++ee+m+G v++k+l++elLge+siae+++yldng++fvgsr+gdsQlvkl es+++gsy
   Q: 260 CHNRVDVNGSRYLLGDMEGRLFMLLLEKEEQMDGsVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLTAESNEQGSY 346
    *************************************************************************************** PP
   S: 348 vvilerfknlkpIvdlvvvdldrrgqgqvvtvsgaskdGslRvirlgigieelasvdlkgvigllslkstidestdnslvlafvset 434
    vv++e+f+nl+pIvd++vvdl+r+gqgq+vt+sga+k+GslR+ir+gigi+e+as+dl+g++gl++l++ d++td++lvl+fv++t
   Q: 347 VVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQT 433
    *************************************************************************************** PP
   S: 435 kvlnlntgeeledtelsgvlsdlqtlltqdvidykqllqvTsqsvrLvssqikrllkeWkaknleiigvassNteqvliaatsndlv 521
    +vl+l+ gee+e+t l g+++d+qt+++ +v +++ql+q+Ts+svrLv ++ + l++eWk+++++ ++v s+N+ qvl+a+ ++ l+
   Q: 434 RVLTLT-GEEVEETDLAGFVDDQQTFFCGNV-AHQQLIQITSASVRLVAQNPQSLVSEWKEPQGRKVSVCSCNSRQVLLAV-GRVLY 517
    *****9.************************.*************************************************.***** PP
   S: 522 yleigdgeldltstttlenevavldlinieddpnlsdleavglltdiskrililpdletiykeklggeiipRsilltefEnvtYlLi 608
    ylei++gel+++s t++e+eva+ld+++++ ++ ls l+a+gl+tdis+ril+lp +++++ke+lggeiipRsil+t fE+ +YlL+
   Q: 518 YLEIHPGELRQISCTEMEHEVACLDVTPLGGSDTLSSLCAIGLWTDISARILSLPGFQLLHKEMLGGEIIPRSILMTSFESSHYLLC 604
    *************************************************************************************** PP
   S: 609 algdGalvsyildidtg.desdakksnlgtspgtlktfkslsttqvfassDrPtvIyssskkLvfSnVnlkeVqylCsldseaypds 694
    algdGal+++ l++dt+ +sd+kk++lgt+p++l+tf+slstt+vfa+sDrPtvIyss++kLvfSnVnlkeV+y+C+l+se+ypds
   Q: 605 ALGDGALFYFSLNTDTVgLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDS 691
    ***************96268******************************************************************* PP
   S: 695 lalanngslvigtvddiqklkiRsiplgeslrriayqesvitfgvisdrreldf.klklkalrnnasilalvpdiennklfsdglri 780
    lalann++l+igt+d+iqkl+iR++pl+es+r+i+yqe++++fgv+s+r+e+++ ++++ +lr++as++al+++++ +klfs+++
   Q: 692 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDaSGGSSPLRPSASTQALSSSVSCSKLFSGSTSP 778
    ******************************************************9******************************** PP
   S: 781 lelseleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltv 867
    +e+s++ee+ev++ll++D++tfe+l+++++ ++E+++sl+S+kl++D+ +y+vv+ta+v+p+e+e+k+gri+vf+++d+ kL+tv
   Q: 779 HETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQNEYTLSLVSCKLGKDPTTYFVVGTAMVYPDEAEPKQGRIVVFQYNDG---KLQTV 862
    *******************************************************************************...***** PP
   S: 868 aekkvkgavidlvklNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeE 954
    aek+vkgav+++v++Ngklla+ins++rlyew t ekelr+eC+++n+i+aL+lkt++dfi+VgDlmrsv Ll+yk +eg+feE
   Q: 863 AEKEVKGAVYSMVEFNGKLLASINSTVRLYEW----TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEE 945
    ********************************....*************************************************** PP
   S: 955 sardynlewmsaveilnddiflgaencgNlfvvkkdi..kagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssev 1039
    +ard+n++wmsaveil+dd+flgaen++Nlfv++kd +a++tdeer++l+evg f+lgefv+vf++g+lv+q++ge++ +++++v
   Q: 946 IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDRipSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSPPTQGSV 1032
    ************************************656899********************************************* PP
   S: 1040 ifgtengeigvilrlrrellkflrnlestlkkvikrvakieHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvl.ye 1125
    +fgt+ng+ig++++l+++++++l +++++l+kvik+v+kieHs++RsF+te++te+a+gf+dgdLies+lD+sr+k+++++++l +
   Q: 1033 LFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTE

Organism Xenopus tropicalis
Protein Sequence
(Fasta)
MSYNYVVTAQ KPTAVNACVT GHFTSEDDLN LLIAKNTRLE IYVVTPEGLR PVKEVGMYGK 60
IAVMELFRPK GESKDLLFIL TAKYNACILE YKQNGDSIDI ITRAHGNVQD RIGRPSETGI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Xtr-131987|E3,DDB1|Xenopus tropicalis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGTACA ACTACGTGGT GACAGCTCAG AAACCCACAG CGGTCAATGC CTGTGTGACA 60
GGTATGAGTT GTGCGGGACG TATCCTTGCT GGCATGCTTG TATGCAGGGC TATTGGCTGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Xtr-131987|E3,DDB1|Xenopus tropicalis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000120 Aegilops tauschii 49.46 0.00e+00 1109.00
IUUC-Aml-002096 Ailuropoda melanoleuca 93.27 0.00e+00 2171.00
IUUC-Atr-002742 Amborella trichopoda 52.43 0.00e+00 1174.00
IUUC-Apl-003624 Anas platyrhynchos 91.28 0.00e+00 2095.00
IUUC-Aca-005085 Anolis carolinensis 92.66 0.00e+00 2156.00
IUUC-Aly-005857 Arabidopsis lyrata 52.43 0.00e+00 1174.00
IUUC-Ath-006658 Arabidopsis thaliana 52.52 0.00e+00 1174.00
IUUC-Acl-008149 Aspergillus clavatus 27.01 8.00e-106 378.00
IUUC-Afl-008549 Aspergillus flavus 28.12 3.00e-109 390.00
IUUC-Afu-009076 Aspergillus fumigatus 26.79 1.00e-113 404.00
IUUC-Ani-009302 Aspergillus nidulans 27.31 1.00e-89 324.00
IUUC-Ang-009636 Aspergillus niger 27.17 2.00e-89 324.00
IUUC-Aor-010073 Aspergillus oryzae 28.08 1.00e-113 404.00
IUUC-Ate-010422 Aspergillus terreus 26.71 3.00e-105 376.00
IUUC-Ame-011643 Astyanax mexicanus 79.50 0.00e+00 1816.00
IUUC-Bgr-012164 Blumeria graminis 26.34 1.00e-96 348.00
IUUC-Bta-012494 Bos taurus 93.09 0.00e+00 2169.00
IUUC-Bci-013957 Botrytis cinerea 25.57 1.00e-87 318.00
IUUC-Bdi-014186 Brachypodium distachyon 51.83 0.00e+00 1150.00
IUUC-Bol-015922 Brassica oleracea 52.78 0.00e+00 1184.00
IUUC-Bra-017300 Brassica rapa 52.78 0.00e+00 1179.00
IUUC-Cel-018239 Caenorhabditis elegans 37.07 0.00e+00 772.00
IUUC-Cja-019165 Callithrix jacchus 93.18 0.00e+00 2168.00
IUUC-Cfa-020406 Canis familiaris 93.27 0.00e+00 2171.00
IUUC-Cpo-022154 Cavia porcellus 93.09 0.00e+00 2162.00
IUUC-Cre-022557 Chlamydomonas reinhardtii 40.22 0.00e+00 768.00
IUUC-Csa-024061 Chlorocebus sabaeus 93.18 0.00e+00 2168.00
IUUC-Cho-024554 Choloepus hoffmanni 87.97 0.00e+00 900.00
IUUC-Cin-025466 Ciona intestinalis 61.51 0.00e+00 1464.00
IUUC-Csv-026370 Ciona savignyi 59.38 0.00e+00 1301.00
IUUC-Cgl-026595 Colletotrichum gloeosporioides 25.88 2.00e-96 347.00
IUUC-Cme-027342 Cyanidioschyzon merolae 26.70 9.00e-109 388.00
IUUC-Dre-027448 Danio rerio 89.64 0.00e+00 1008.00
IUUC-Dno-029794 Dasypus novemcinctus 92.86 0.00e+00 2033.00
IUUC-Dor-030789 Dipodomys ordii 78.36 0.00e+00 911.00
IUUC-Dse-031491 Dothistroma septosporum 27.74 2.00e-112 400.00
IUUC-Dme-031940 Drosophila melanogaster 60.26 0.00e+00 1372.00
IUUC-Ete-032913 Echinops telfairi 85.86 0.00e+00 671.00
IUUC-Eca-033777 Equus caballus 92.57 0.00e+00 2145.00
IUUC-Eeu-034900 Erinaceus europaeus 89.80 0.00e+00 1050.00
IUUC-Fca-035869 Felis catus 93.27 0.00e+00 2171.00
IUUC-Fal-036777 Ficedula albicollis 92.24 0.00e+00 2141.00
IUUC-Fox-037954 Fusarium oxysporum 26.27 8.00e-104 372.00
IUUC-Fso-038292 Fusarium solani 25.87 4.00e-107 383.00
IUUC-Gmo-038815 Gadus morhua 79.64 0.00e+00 932.00
IUUC-Ggr-039907 Gaeumannomyces graminis 25.77 1.00e-96 348.00
IUUC-Gga-040995 Gallus gallus 92.40 0.00e+00 2154.00
IUUC-Gac-042390 Gasterosteus aculeatus 87.67 0.00e+00 1935.00
IUUC-Gma-042743 Glycine max 51.87 0.00e+00 1138.00
IUUC-Ggo-044891 Gorilla gorilla 92.85 0.00e+00 2159.00
IUUC-Hsa-046709 Homo sapiens 93.18 0.00e+00 2168.00
IUUC-Hvu-047504 Hordeum vulgare 51.57 0.00e+00 1134.00
IUUC-Itr-048678 Ictidomys tridecemlineatus 93.18 0.00e+00 2170.00
IUUC-Lch-050565 Latimeria chalumnae 91.10 0.00e+00 2120.00
IUUC-Lpe-051260 Leersia perrieri 52.13 0.00e+00 1149.00
IUUC-Loc-052091 Lepisosteus oculatus 81.16 0.00e+00 1462.00
IUUC-Lma-053246 Leptosphaeria maculans 26.03 2.00e-102 367.00
IUUC-Laf-053502 Loxodonta africana 93.18 0.00e+00 2167.00
IUUC-Mcc-054802 Macaca mulatta 93.13 0.00e+00 2153.00
IUUC-Meu-056808 Macropus eugenii 89.37 0.00e+00 1356.00
IUUC-Mor-057253 Magnaporthe oryzae 25.52 3.00e-76 280.00
IUUC-Mpo-057562 Magnaporthe poae 25.43 5.00e-95 342.00
IUUC-Mtr-057743 Medicago truncatula 51.09 0.00e+00 1133.00
IUUC-Mla-059154 Melampsora laricipopulina 24.24 3.00e-77 283.00
IUUC-Mga-059824 Meleagris gallopavo 91.74 0.00e+00 2010.00
IUUC-Mvi-060279 Microbotryum violaceum 27.15 9.00e-112 398.00
IUUC-Mmr-061215 Microcebus murinus 92.66 0.00e+00 2151.00
IUUC-Mdo-062028 Monodelphis domestica 91.07 0.00e+00 1778.00
IUUC-Mmu-064327 Mus musculus 93.18 0.00e+00 2169.00
IUUC-Mac-065445 Musa acuminata 52.22 0.00e+00 1134.00
IUUC-Mpu-065814 Mustela putorius furo 90.12 0.00e+00 2079.00
IUUC-Mlu-067136 Myotis lucifugus 93.18 0.00e+00 2164.00
IUUC-Nfi-068355 Neosartorya fischeri 26.87 8.00e-108 385.00
IUUC-Ncr-068620 Neurospora crassa 25.34 2.00e-87 317.00
IUUC-Nle-069566 Nomascus leucogenys 92.95 0.00e+00 2139.00
IUUC-Opr-070915 Ochotona princeps 90.14 0.00e+00 1588.00
IUUC-Ont-071753 Oreochromis niloticus 88.64 0.00e+00 2057.00
IUUC-Oan-073187 Ornithorhynchus anatinus 92.76 0.00e+00 1956.00
IUUC-Ocu-074619 Oryctolagus cuniculus 93.18 0.00e+00 2167.00
IUUC-Oba-075091 Oryza barthii 51.25 0.00e+00 795.00
IUUC-Obr-076425 Oryza brachyantha 52.24 0.00e+00 1150.00
IUUC-Ogu-078794 Oryza glumaepatula 52.22 0.00e+00 1157.00
IUUC-Oin-079725 Oryza indica 51.87 0.00e+00 1143.00
IUUC-Olo-080842 Oryza longistaminata 51.06 0.00e+00 1051.00
IUUC-Ome-081818 Oryza meridionalis 52.31 0.00e+00 1159.00
IUUC-Oni-082879 Oryza nivara 51.52 0.00e+00 1134.00
IUUC-Opu-083361 Oryza punctata 51.72 0.00e+00 1148.00
IUUC-Oru-084781 Oryza rufipogon 52.22 0.00e+00 1158.00
IUUC-Osa-086293 Oryza sativa 52.22 0.00e+00 1158.00
IUUC-Ola-086881 Oryzias latipes 87.88 0.00e+00 2045.00
IUUC-Olu-087674 Ostreococcus lucimarinus 44.82 0.00e+00 930.00
IUUC-Oga-089056 Otolemur garnettii 93.18 0.00e+00 2168.00
IUUC-Oar-089457 Ovis aries 93.17 0.00e+00 2135.00
IUUC-Ptr-091179 Pan troglodytes 92.98 0.00e+00 2131.00
IUUC-Pan-092019 Papio anubis 92.69 0.00e+00 2155.00
IUUC-Psi-093407 Pelodiscus sinensis 92.20 0.00e+00 2118.00
IUUC-Pma-094272 Petromyzon marinus 83.95 0.00e+00 1792.00
IUUC-Pno-094864 Phaeosphaeria nodorum 27.13 3.00e-111 396.00
IUUC-Ppa-095885 Physcomitrella patens 52.43 0.00e+00 1143.00
IUUC-Pfo-096083 Poecilia formosa 88.12 0.00e+00 2046.00
IUUC-Pab-098652 Pongo abelii 88.87 0.00e+00 2040.00
IUUC-Pop-099593 Populus trichocarpa 52.39 0.00e+00 1118.00
IUUC-Pca-100189 Procavia capensis 91.99 0.00e+00 1244.00
IUUC-Ppe-101987 Prunus persica 52.00 0.00e+00 1100.00
IUUC-Pva-102605 Pteropus vampyrus 93.09 0.00e+00 2166.00
IUUC-Pgr-103659 Puccinia graminis 24.27 4.00e-64 240.00
IUUC-Ptt-103884 Puccinia triticina 23.28 7.00e-59 223.00
IUUC-Pte-104233 Pyrenophora teres 27.15 1.00e-113 404.00
IUUC-Pyt-104454 Pyrenophora triticirepentis 27.31 2.00e-111 396.00
IUUC-Rno-106004 Rattus norvegicus 93.27 0.00e+00 2169.00
IUUC-Sha-106726 Sarcophilus harrisii 90.78 0.00e+00 1964.00
IUUC-Sja-107864 Schizosaccharomyces japonicus 23.55 3.00e-73 270.00
IUUC-Spo-108029 Schizosaccharomyces pombe 25.77 7.00e-101 362.00
IUUC-Ssl-108441 Sclerotinia sclerotiorum 25.47 2.00e-81 297.00
IUUC-Smo-108808 Selaginella moellendorffii 51.83 0.00e+00 1190.00
IUUC-Sit-109735 Setaria italica 52.51 0.00e+00 1151.00
IUUC-Sly-111520 Solanum lycopersicum 52.12 0.00e+00 1142.00
IUUC-Sar-113606 Sorex araneus 84.58 2.00e-119 424.00
IUUC-Sbi-114539 Sorghum bicolor 51.38 0.00e+00 1136.00
IUUC-Sre-114936 Sporisorium reilianum 25.97 1.00e-67 252.00
IUUC-Ssc-116038 Sus scrofa 93.18 0.00e+00 2170.00
IUUC-Tgu-117512 Taeniopygia guttata 92.40 0.00e+00 2145.00
IUUC-Tru-117593 Takifugu rubripes 87.50 0.00e+00 2040.00
IUUC-Tsy-119513 Tarsius syrichta 88.01 0.00e+00 1106.00
IUUC-Tni-120551 Tetraodon nigroviridis 82.50 0.00e+00 1649.00
IUUC-Tca-121505 Theobroma cacao 52.83 0.00e+00 1142.00
IUUC-Tre-122136 Trichoderma reesei 26.32 6.00e-102 365.00
IUUC-Tvi-122512 Trichoderma virens 25.69 9.00e-99 355.00
IUUC-Tae-124186 Triticum aestivum 51.48 0.00e+00 1134.00
IUUC-Tur-126451 Triticum urartu 51.90 0.00e+00 1028.00
IUUC-Tme-127057 Tuber melanosporum 28.29 1.00e-106 380.00
IUUC-Ttr-128891 Tursiops truncatus 87.92 0.00e+00 1386.00
IUUC-Uma-129583 Ustilago maydis 26.22 4.00e-57 217.00
IUUC-Vda-129870 Verticillium dahliae 25.06 3.00e-88 320.00
IUUC-Vpa-130117 Vicugna pacos 88.10 0.00e+00 1627.00
IUUC-Vvi-131033 Vitis vinifera 51.96 0.00e+00 1146.00
IUUC-Xma-134117 Xiphophorus maculatus 86.24 0.00e+00 1996.00
IUUC-Zma-134758 Zea mays 52.31 0.00e+00 1155.00
Created Date 25-Jun-2017

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