iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000021993.1	ENSSTOT00000029091.1	ENSSTOP00000021366.1
ENSSTOG00000021993.1	ENSSTOT00000022876.1	ENSSTOP00000017777.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-23	81.2	555	588
UBD/Beta-Prp	1.40e-41	142.6	516	807

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH + v+ l++ +d + l+s++ D t+++W++++
   Q: 555  GHDGAVSTLCWsHDqRWLLSAAQDQTLRLWSVHR 588
           8**********988899**************976 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..ghedsv 97
           + ++cv+fs d+++la g +++   +++++   + + lsgh+++v+++++s+d+ +l+++++D+t+++w++   + +  l   +  + v
   Q: 516  TAVSCVQFSGDGRWLACGLANSLSLIFEASLTGTPAALSGHDGAVSTLCWSHDQRWLLSAAQDQTLRLWSVHRKELLLLLDrgRLCKPV 604
           56889***************************************************************************976778999 PP
   S: 98   lslsfspsgdklv..sGshdrtirv...........wdletgqclee..tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgk 170
            s +f+  + +++  sG + + +r            ++ +++++       +g ++v++  +v+++   ++ +++ +rt++++dl+tg+
   Q: 605  PSAQFYYMDAFILlsSGQELQLLRYhvdpvrdeikrYKPRSRYECVLrlSTRGATEVTSLSAVNDFYsHVVLTAGRNRTLQVFDLNTGC 693
           999999955555422444555555566666666666666666655447888999999999999999999******************** PP
   S: 171  llrtltgghtdsvysls......fdsng....kelvsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsir 247
                 ++h ++++ +       f+ ++    + +++ +    v+lwdl+t +c r+++gh     +++++fsp + ++++g++D+  +
   Q: 694  SAAVIAEAHSRPIHQICqnkgssFTTQQfqayNLFLTTAVGEGVRLWDLRTLRCERSFEGHPnrGYPCRIAFSPCGRFVACGAEDRHAY 782
           *****999********96677666666699999***************************973378899******************** PP
   S: 248  iWdlrsgdllktlqlhnssvisvav 272
           +++l  +++ + l++h ++v+ va+
   Q: 783  VYNLGCSTFSHRLAGHTDTVSEVAF 807
           **********************998 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

LKMAQEVSCI GDCEDTIITE KYLAESTEAS SHVQLACSML YCAFPLHGNQ LCLWSIRDPS 60
HQLLILQGHL QSITAMAFGN KENPPLICSA SQDCLMIWNL DECREKSLKG LVPRGTVMGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGAAAATGG CCCAGGAGGT GTCCTGCATC GGTGACTGTG AGGACACTAT CATTACAGAG 60
AAGTACCTGG CTGAGTCCAC GGAGGCTTCG TCTCATGTGC AGCTGGCCTG CAGCATGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002258	Ailuropoda melanoleuca	59.59	0.00e+00	788.00
IUUC-Aca-004807	Anolis carolinensis	50.93	0.00e+00	813.00
IUUC-Bta-013316	Bos taurus	61.17	0.00e+00	950.00
IUUC-Cja-018825	Callithrix jacchus	61.99	0.00e+00	1037.00
IUUC-Cfa-020895	Canis familiaris	63.07	0.00e+00	1023.00
IUUC-Cpo-022282	Cavia porcellus	62.50	0.00e+00	1013.00
IUUC-Csa-023439	Chlorocebus sabaeus	62.79	0.00e+00	985.00
IUUC-Cho-025046	Choloepus hoffmanni	51.92	1.00e-171	596.00
IUUC-Dre-028376	Danio rerio	40.29	3.00e-155	541.00
IUUC-Dno-029649	Dasypus novemcinctus	61.58	0.00e+00	830.00
IUUC-Dor-030824	Dipodomys ordii	56.13	0.00e+00	674.00
IUUC-Eca-033270	Equus caballus	65.28	0.00e+00	1073.00
IUUC-Fca-036149	Felis catus	60.10	0.00e+00	966.00
IUUC-Fal-037410	Ficedula albicollis	48.04	4.00e-180	624.00
IUUC-Gmo-038923	Gadus morhua	38.81	1.00e-115	410.00
IUUC-Gga-040974	Gallus gallus	46.49	0.00e+00	727.00
IUUC-Gac-042310	Gasterosteus aculeatus	36.27	6.00e-100	358.00
IUUC-Ggo-044557	Gorilla gorilla	61.58	0.00e+00	1026.00
IUUC-Hsa-046312	Homo sapiens	62.23	0.00e+00	1040.00
IUUC-Laf-054450	Loxodonta africana	60.05	0.00e+00	908.00
IUUC-Mcc-055807	Macaca mulatta	58.10	0.00e+00	814.00
IUUC-Meu-056116	Macropus eugenii	35.73	6.00e-64	238.00
IUUC-Mga-060088	Meleagris gallopavo	44.95	5.00e-178	617.00
IUUC-Mdo-062857	Monodelphis domestica	54.75	0.00e+00	914.00
IUUC-Mmu-063220	Mus musculus	61.65	0.00e+00	862.00
IUUC-Mpu-066921	Mustela putorius furo	59.65	0.00e+00	914.00
IUUC-Mlu-067717	Myotis lucifugus	55.18	0.00e+00	666.00
IUUC-Nle-069061	Nomascus leucogenys	51.83	0.00e+00	811.00
IUUC-Opr-070612	Ochotona princeps	61.24	1.00e-84	307.00
IUUC-Ont-072187	Oreochromis niloticus	39.35	2.00e-154	539.00
IUUC-Oan-072701	Ornithorhynchus anatinus	48.59	2.00e-128	452.00
IUUC-Ocu-074602	Oryctolagus cuniculus	63.59	0.00e+00	1024.00
IUUC-Ola-086633	Oryzias latipes	35.46	2.00e-119	422.00
IUUC-Oga-088499	Otolemur garnettii	64.84	0.00e+00	1035.00
IUUC-Oar-089256	Ovis aries	60.22	0.00e+00	913.00
IUUC-Ptr-091545	Pan troglodytes	55.83	1.00e-178	619.00
IUUC-Pan-092299	Papio anubis	62.45	0.00e+00	1036.00
IUUC-Psi-093010	Pelodiscus sinensis	51.97	0.00e+00	828.00
IUUC-Pab-097646	Pongo abelii	52.79	5.00e-166	577.00
IUUC-Pca-100720	Procavia capensis	50.94	1.00e-127	450.00
IUUC-Pva-102808	Pteropus vampyrus	54.86	0.00e+00	803.00
IUUC-Rno-105715	Rattus norvegicus	61.66	0.00e+00	970.00
IUUC-Sha-107546	Sarcophilus harrisii	53.55	0.00e+00	904.00
IUUC-Sar-113543	Sorex araneus	48.19	0.00e+00	701.00
IUUC-Ssc-116335	Sus scrofa	67.23	8.00e-41	160.00
IUUC-Tgu-117249	Taeniopygia guttata	46.62	0.00e+00	658.00
IUUC-Tsy-119238	Tarsius syrichta	61.09	0.00e+00	800.00
IUUC-Tni-120639	Tetraodon nigroviridis	33.68	1.00e-46	180.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence