iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015641

Ensembl Protein ID

Bo3g055680.1

UniProt Accession

A0A0D3B9F2; A0A0D3B9F2_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g055680	Bo3g055680.1	Bo3g055680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.60e-22	79.7	170	211
ULD/UDP/UBQ/UBQ_PIM	4.30e-14	53.7	17	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ + q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 170  LESTILQILDMGggaWDRDTVVRALRAAFNNPERAVEYLYSG 211
           78999**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 21   dtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
            +v+++K++i++++g   +p++++ LI++G++LkD+tt++e+++ ++s++++++ ksk
   Q: 17   PKVADVKKNIETVQGadvYPAAKLMLIHQGRVLKDETTIEENKVAENSFIVIMMAKSK 74
           589**************************************************99987 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MCFLGHNPVV EISREPPKVA DVKKNIETVQ GADVYPAAKL MLIHQGRVLK DETTIEENKV 60
AENSFIVIMM AKSKPSSSGS SSASSGPTVQ AKSMPTSSTQ PPASVAIPAA TAPAPVAATE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGCTTCT TGGGCCACAA TCCAGTAGTG GAGATATCGA GGGAACCACC AAAGGTAGGG 60
GCCAGATTTC GTGTGCATCA TCATCTTTAC CTACTCGCCT TCTCCCCAAG TTATTGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	38.85	6.00e-31	128.00
IUUC-Atr-003116	Amborella trichopoda	78.23	5.00e-97	347.00
IUUC-Aly-005498	Arabidopsis lyrata	91.60	5.00e-118	417.00
IUUC-Ath-006676	Arabidopsis thaliana	90.08	2.00e-119	422.00
IUUC-Bra-017983	Brassica rapa	93.08	2.00e-155	541.00
IUUC-Cpo-022145	Cavia porcellus	38.17	7.00e-33	134.00
IUUC-Gga-040544	Gallus gallus	36.80	8.00e-31	127.00
IUUC-Mtr-058148	Medicago truncatula	77.87	1.00e-106	379.00
IUUC-Psi-093477	Pelodiscus sinensis	38.64	2.00e-27	116.00
IUUC-Pgr-103618	Puccinia graminis	40.07	6.00e-26	111.00
IUUC-Sly-111480	Solanum lycopersicum	65.97	2.00e-124	438.00
IUUC-Sbi-113871	Sorghum bicolor	66.39	3.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence