iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049433

Ensembl Protein ID

ENSLACP00000008445.2

UniProt Accession

H3AFM4; H3AFM4_LATCH

Genbank Protein ID

ENSLACP00000008445

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01182310

Gene Name

TRIM8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000007476.2	ENSLACT00000008513.2	ENSLACP00000008445.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-08	33.0	15	56
E3 activity/RING/U-box	4.90e-06	26.8	11	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl  f + p+ lpC+H f++ C+ ++w     ++ +  rCP C+
   Q: 15   CPICLHVFVE-PVQLPCKHNFCRGCIgEAW----AKEAGLVRCPECN 56
           ********99.999****************....88**********7 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssI.ekwlasggk.tcPvtrqpl.teedlvPnltlrrliqaw 68
           ee++CpI l ++ +Pv lp+ + + r +I e w ++ g   cP ++q   ++ +l  nl l ++++++
   Q: 11   EELICPICLHVFVEPVQLPCKHNFCRGCIgEAWAKEAGLvRCPECNQAYnQKPSLEKNLKLTNIVEKF 78
           799**************************677887777689*******96677889999999998887 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MAENWKSCFE EELICPICLH VFVEPVQLPC KHNFCRGCIG EAWAKEAGLV RCPECNQAYN 60
QKPSLEKNLK LTNIVEKFNS LGVEKAPSSV LHCVFCRRGP PLPAQKVCLR CEAPCCQSHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAAA ACTGGAAGAG TTGCTTTGAA GAGGAGCTGA TCTGCCCCAT CTGCCTTCAT 60
GTCTTTGTGG AGCCGGTGCA GCTGCCTTGC AAGCACAACT TCTGCCGGGG TTGCATCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

lcm:102366368

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001258	Ailuropoda melanoleuca	79.86	0.00e+00	899.00
IUUC-Apl-004223	Anas platyrhynchos	84.14	0.00e+00	920.00
IUUC-Aca-005106	Anolis carolinensis	84.11	0.00e+00	956.00
IUUC-Ame-011348	Astyanax mexicanus	66.02	0.00e+00	731.00
IUUC-Bta-012787	Bos taurus	80.18	0.00e+00	907.00
IUUC-Cja-019471	Callithrix jacchus	79.82	0.00e+00	903.00
IUUC-Cfa-020052	Canis familiaris	79.82	0.00e+00	902.00
IUUC-Cpo-022491	Cavia porcellus	73.85	2.00e-152	531.00
IUUC-Csa-023544	Chlorocebus sabaeus	80.00	0.00e+00	905.00
IUUC-Dre-028013	Danio rerio	65.26	0.00e+00	738.00
IUUC-Dno-029676	Dasypus novemcinctus	79.82	0.00e+00	905.00
IUUC-Dor-030402	Dipodomys ordii	78.93	0.00e+00	895.00
IUUC-Ete-033188	Echinops telfairi	72.60	0.00e+00	800.00
IUUC-Eca-033524	Equus caballus	79.50	0.00e+00	891.00
IUUC-Eeu-034979	Erinaceus europaeus	93.19	6.00e-109	387.00
IUUC-Fca-036362	Felis catus	79.82	0.00e+00	900.00
IUUC-Fal-036652	Ficedula albicollis	83.45	0.00e+00	906.00
IUUC-Gmo-039405	Gadus morhua	58.10	0.00e+00	628.00
IUUC-Gga-040813	Gallus gallus	84.11	0.00e+00	923.00
IUUC-Gac-041792	Gasterosteus aculeatus	61.27	0.00e+00	637.00
IUUC-Ggo-044962	Gorilla gorilla	79.82	0.00e+00	903.00
IUUC-Hsa-046158	Homo sapiens	79.64	0.00e+00	899.00
IUUC-Itr-048118	Ictidomys tridecemlineatus	80.18	0.00e+00	907.00
IUUC-Loc-052026	Lepisosteus oculatus	73.84	0.00e+00	841.00
IUUC-Laf-054159	Loxodonta africana	76.01	0.00e+00	700.00
IUUC-Mcc-055490	Macaca mulatta	80.00	0.00e+00	905.00
IUUC-Meu-056549	Macropus eugenii	75.96	2.00e-173	601.00
IUUC-Mga-059334	Meleagris gallopavo	84.29	0.00e+00	920.00
IUUC-Mmr-061672	Microcebus murinus	80.00	0.00e+00	905.00
IUUC-Mdo-061849	Monodelphis domestica	78.46	0.00e+00	784.00
IUUC-Mmu-063537	Mus musculus	79.46	0.00e+00	898.00
IUUC-Mpu-065762	Mustela putorius furo	80.00	0.00e+00	904.00
IUUC-Mlu-066979	Myotis lucifugus	72.66	1.00e-161	561.00
IUUC-Nle-069419	Nomascus leucogenys	79.82	0.00e+00	903.00
IUUC-Opr-070981	Ochotona princeps	79.46	0.00e+00	901.00
IUUC-Ont-072053	Oreochromis niloticus	57.75	1.00e-174	606.00
IUUC-Oan-073608	Ornithorhynchus anatinus	82.00	0.00e+00	750.00
IUUC-Ocu-074694	Oryctolagus cuniculus	80.00	0.00e+00	877.00
IUUC-Ola-086949	Oryzias latipes	59.06	4.00e-176	610.00
IUUC-Oga-089175	Otolemur garnettii	80.18	0.00e+00	907.00
IUUC-Oar-089591	Ovis aries	71.68	0.00e+00	709.00
IUUC-Ptr-091309	Pan troglodytes	79.11	0.00e+00	870.00
IUUC-Pan-091903	Papio anubis	80.00	0.00e+00	905.00
IUUC-Psi-093293	Pelodiscus sinensis	83.16	0.00e+00	921.00
IUUC-Pfo-097191	Poecilia formosa	56.89	3.00e-166	578.00
IUUC-Pab-098251	Pongo abelii	76.96	0.00e+00	857.00
IUUC-Pca-100504	Procavia capensis	80.00	0.00e+00	904.00
IUUC-Pva-102320	Pteropus vampyrus	79.11	0.00e+00	867.00
IUUC-Rno-105545	Rattus norvegicus	79.29	0.00e+00	895.00
IUUC-Ssc-116121	Sus scrofa	80.18	0.00e+00	907.00
IUUC-Tgu-116724	Taeniopygia guttata	84.46	0.00e+00	922.00
IUUC-Tru-118048	Takifugu rubripes	58.66	1.00e-177	615.00
IUUC-Tni-120856	Tetraodon nigroviridis	58.20	2.00e-166	578.00
IUUC-Tbe-127400	Tupaia belangeri	73.31	2.00e-119	422.00
IUUC-Ttr-128233	Tursiops truncatus	79.11	0.00e+00	882.00
IUUC-Xtr-132578	Xenopus tropicalis	82.86	0.00e+00	915.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence